ID: uc002ezh.1_intron_4_0_chr16_70693657_f
GENE: (5)
chr16:70693607-70693949+


(2)
B-CELL 		(3)
BRAIN 		(3)
BREAST 		(10)
CELL-LINE 		(1)
HEART 		(1)
HELA 		(3)
LIVER 		(2)
OTHER 		(11)
SKIN

Sense strand
CCTGCTGGACAACTGCTTCCGGGTCATGGAGCTGCTGTACTGCTCCTGCTGTAAGGAGCTCTCAGGGGATGGCGCCTGGGGGTGGGAGGCCAGGCATCTGGGCCCACCCAGGCCAGCTGGCAGAGCTGGCGTCCTCCCGGGCATATCCTCTGCTCCCCGGGGCTACAAGCCATTTCTGGAAGCCAGGATGGGCCCTGGGTAGAGTGGGGGACAAGCACATGCGGCTTGGCTTAGTGGGGAGGGTGGTCTTGAACACTGCTGCAGTCTTTTTTTTTTTCCCCTATCTCTTGCAGGTAAACAAAGCTCCGTCCTAAACTGGCAGGACTGTGAGGTGCCAAGTCCT
........................................................................................................................................((((((...(((((..(((((((((((......(((.((((((...)))))))))))))))))..)))..)))))...((....)).))))))......((((((((.......(((.((((...)))).)))....))))))))..............................................................
..................................................................................................................................131......................................................................................................................................................284.........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343337DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189787SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCCC...............................................................2127.507.506.001.50-------------------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTCCCC................................................................204.000.003.001.00-------------------------------------
......................................................................................................................................................................................................................................................................AGTCTTTTTTTTTTTCGGTC.............................................................204.000.004.00--------------------------------------
...........................................................................................................................................................................................................................................................................................................................CTGGCAGGACTGTGAGG...........1723.003.00---------0.50---------------------1.00-0.500.500.50---
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTCGAG.................................................................193.000.003.00--------------------------------------
........................................................................................................................................................................................................................................................................................................................AAACTGGCAGGACTGTGAGGTGC........2313.003.00---3.00-----------------------------------
.......................................................................................................................................................................................................................................................................................................................TAAACTGGCAGGACTGTGAG............2012.002.00-----1.00------1.00--------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCCCC..............................................................2222.002.001.500.50-------------------------------------
......................................................................................................................................................................................................................................................................................................................CTAAACTGGCAGGACTGTGAGG...........2212.002.00-------2.00-------------------------------
........................................................................................................................................................................................................................................................TTGAACACTGCTGCAGCC.............................................................................182.000.00--------2.00------------------------------
..........................................................................................................................................................................................................................................................................................................................ACTGGCAGGACTGTGAG............1712.002.00--------------1.001.00-----------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTCCC.................................................................192.000.001.001.00-------------------------------------
......................................................................................................................................................................................................................................................................AGTCTTTTTTTTTTTCCCGGGC...........................................................222.000.002.00--------------------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTCTG.................................................................192.000.002.00--------------------------------------
.....................................................................................................................................................................................................................................................................CAGTCTTTTTTTTTTTCCCC..............................................................2021.501.501.000.50-------------------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCTCCC.............................................................2351.200.801.000.20-------------------------------------
.......................................................................................................................................................................................................................................................................................................................TAAACTGGCAGGACTGTGAGGTG.........2311.001.00------1.00--------------------------------
.........................................................................................................................................................................................................................................................................CTTTTTTTTTTTCCCCTATTG.........................................................211.000.00----------------------------1.00----------
......................................................................................................................................................................................................................................................................AGTCTTTTTTTTTTTCCGAA.............................................................201.000.001.00--------------------------------------
........................................................................................................................................................................................................................................................................................................AACAAAGCTCCGTCCTA..............................1711.001.00------------------1.00--------------------
......................GTCATGGAGCTGCTGTACT..............................................................................................................................................................................................................................................................................................................1911.001.00---------------------------1.00-----------
.......................................................................................................................................CCCGGGCATATCCTCCA...............................................................................................................................................................................................171.000.00-------------------------1.00-------------
..........................................................................................................................................................................................................................................................................................................................ACTGGCAGGACTGTGAGGTGCC.......2211.001.00-----1.00---------------------------------
.........................................................................................................................................................................................................................................................................................................................AACTGGCAGGACTGTGAGGTGC........2211.001.00-------------------1.00-------------------
.........................................................................................................................................................................................GGATGGGCCCTGGGTAGGGAG.........................................................................................................................................211.000.00-----------1.00---------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTCGAG................................................................201.000.001.00--------------------------------------
.............................................................................................................................................................................................................................................................................................................................GGCAGGACTGTGAGGTGCC.......1911.001.00-----------------------------1.00---------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTGTTG................................................................201.000.001.00--------------------------------------
........................................................................................................................................................................................................................................................................................................................AAACTGGCAGGACTGTGAGGTGT........231.000.00--1.00------------------------------------
...........................................................................................................................................................................................................GTGGGGGACAAGCACAAATG........................................................................................................................201.000.00----1.00----------------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCCCCTCGG..........................................................261.000.001.00--------------------------------------
......................................................................................................................................................................................................................................................................AGTCTTTTTTTTTTTCCGGTT............................................................211.000.001.00--------------------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCCCCCTTG..........................................................2621.002.001.00--------------------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTCTTG.................................................................191.000.001.00--------------------------------------
......................................................................................................................................................................................................................................................................AGTCTTTTTTTTTTTCCCAGG............................................................211.000.00-1.00-------------------------------------
......................................................................................................................................................................................................................................................................AGTCTTTTTTTTTTTCGGC..............................................................191.000.001.00--------------------------------------
..................................................................................................................................................................................................................ACAAGCACATGCGGCTTTCG.................................................................................................................201.000.00----------------1.00----------------------
......................................................................................................................................................................................................................................................................AGTCTTTTTTTTTTTCCCAG.............................................................201.000.00-1.00-------------------------------------
..................................................................................................................................................................................................................................................................CTGCAGTCTTTTTTTTTTCTTG...............................................................221.000.001.00--------------------------------------
....................................................................................................................................................................................................................................................................GCAGTCTTTTTTTTTTTCTTCC.............................................................221.000.001.00--------------------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCC................................................................2021.001.001.00--------------------------------------
...........................................................................................................................................................................................................................................................................................................................CTGGCAGGACTGTGAGGTG.........1911.001.00----------1.00----------------------------
...................................................................................................................................................................TACAAGCCATTTCTGACA..................................................................................................................................................................181.000.00----1.00----------------------------------
...........................................................................................................................................................................................................................................................................................................................CTGGCAGGACTGTGAGGTGC........2011.001.00--------------------------1.00------------
.....................................................................................................................................................CTGCTCCCCGGGGCTCTCG...............................................................................................................................................................................191.000.00--1.00------------------------------------
.............................................................................................................................................................................................................................................................................................................................GGCAGGACTGTGAGGTGC........1811.001.00------------------------1.00--------------
...........................................................................................................................................................................................................................................................................................................................CTGGCAGGACTGTGAAGC..........181.000.00---------1.00-----------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTC.................................................................1950.800.800.600.20-------------------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCGAG..............................................................2250.600.800.200.40-------------------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCTTTG.............................................................2350.400.80-0.20--0.20----------------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCTTCC.............................................................2350.400.800.40--------------------------------------
............................................................................................................................................................................................................................................................................................................................TGGCAGGACTGTGAGG...........1630.330.33------------------------------------0.33--
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCTTG..............................................................2250.200.800.20--------------------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCTCC..............................................................2250.200.800.20--------------------------------------
...........................................................................................................................................................................................................................................................................................................................CTGGCAGGACTGTGAG............1650.200.20---------0.20-----------------------------
...................................................................................................................................................................................................................................................................TGCAGTCTTTTTTTTTTTCTG...............................................................2150.200.800.20--------------------------------------
...........................................................................................................................................................................................................................................................................TTTTTTTTTTCCCCTATCT.........................................................1960.170.17-------------------------------------0.17-
..........................................................CTCTCAGGGGATGGC..............................................................................................................................................................................................................................................................................1580.120.12--------------------------------------0.12

Antisense strand
CCTGCTGGACAACTGCTTCCGGGTCATGGAGCTGCTGTACTGCTCCTGCTGTAAGGAGCTCTCAGGGGATGGCGCCTGGGGGTGGGAGGCCAGGCATCTGGGCCCACCCAGGCCAGCTGGCAGAGCTGGCGTCCTCCCGGGCATATCCTCTGCTCCCCGGGGCTACAAGCCATTTCTGGAAGCCAGGATGGGCCCTGGGTAGAGTGGGGGACAAGCACATGCGGCTTGGCTTAGTGGGGAGGGTGGTCTTGAACACTGCTGCAGTCTTTTTTTTTTTCCCCTATCTCTTGCAGGTAAACAAAGCTCCGTCCTAAACTGGCAGGACTGTGAGGTGCCAAGTCCT
........................................................................................................................................((((((...(((((..(((((((((((......(((.((((((...)))))))))))))))))..)))..)))))...((....)).))))))......((((((((.......(((.((((...)))).)))....))))))))..............................................................
..................................................................................................................................131......................................................................................................................................................284.........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343337DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189787SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................................................................................CCGGGGCTACAAGCCTGG......................................................................................................................................................................... 181.000.00-----------------1.00---------------------
....................................................................................................................CTGGCAGAGCTGGCGGACC................................................................................................................................................................................................................ 191.000.00--1.00------------------------------------
.....................................................................................................................................................................................................................................................CTGCAGCAGTGTTCAAGAC............................................................................... 1911.001.00-----------------------1.00---------------
......................................................................................................................................................................................................................................................................................................GGACGGAGCTTTGTTTA................................ 1711.001.00---------------------1.00-----------------
.......................................................................................................................GCAGAGCTGGCGTCCTCCCGGGCATATCCA.................................................................................................................................................................................................. 301.000.00-------------1.00-------------------------
..............................................................................................................................................................................................................................................GAGGGTGGTCTTGAACTT....................................................................................... 181.000.00--------------------1.00------------------
...............................CTGCTGTACTGCTCCTGAAG.................................................................................................................................................................................................................................................................................................... 201.000.00----------------------1.00----------------
............................................................................................................................GCTGGCGTCCTCCCGGGG......................................................................................................................................................................................................... 181.000.00------------------------------1.00--------
.....................................................................................................................................................................................................................................................................CAGTCTTTTTTTTTTTCCCCAAGG.......................................................... 2421.000.00--------------------------------1.00------
............CTCCATGACCCGGAAGCAG........................................................................................................................................................................................................................................................................................................................ 1911.001.00------1.00--------------------------------