ID: uc002eww.2_intron_0_0_chr16_69345436_f.5p
GENE: (1)
chr16:69345386-69345635+


(1)
AGO1.ip
(2)
AGO2.ip
(4)
B-CELL
(2)
BRAIN
(10)
BREAST
(23)
CELL-LINE
(8)
CERVIX
(1)
FIBROBLAST
(9)
HEART
(2)
HELA
(2)
LIVER
(2)
OTHER
(82)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
CGGGGTGTGGGGCGGACCCAGGAGATGAAATGACAACGTCAACCCTCCAGGTACTTCGTGCGGCCCGGCCCGACTTCGGAGGCCGAAGGCAGCGGGGCCTGCGGGCCGCAGAGCCGGGCGGCGGGCGGGTGGTCAGGTGGGCGCCTCCCAGCCCCGGCCTCGCGACCCCGCTCCGGCCGCCCCCTCGCCGCTTCCGCCCGTGTCTGTTTCCACGCGCTCGGAGCCGGGTGGCATCTCCACCCTCAGGCCT
..........................................................................................(((((((((....))))...(((..(((((((((((((((.((.((((((((........))))..)))).)).)))).)).))).)))))).))).)))))..........................................................
.........................................................................................90....................................................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
TAX577589(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
TAX577740(Rovira)
total RNA. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040029(GSM532914)
G026T. (cervix)
SRR189787SRR029129(GSM416758)
SW480. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR040016(GSM532901)
G645N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
.............................................................................................................................................................................CGGCCGCCCCCTCGCC.............................................................16542.2042.201.80-1.60-1.201.400.201.400.801.200.20-0.601.600.40-0.800.60--1.000.20-1.001.001.401.200.80------0.400.600.40-1.000.600.80-0.600.60-0.60--0.800.400.200.400.40-0.600.800.600.20-0.800.800.80--0.600.600.40------------------0.200.600.20-0.600.200.200.600.20--0.600.60-0.200.200.40--0.200.20-0.20-0.200.400.40--0.200.20---0.200.20----------0.20-0.200.20---------------
.............................................................................................................................................................................CGGCCGCCCCCTCGC..............................................................15929.4429.440.89-0.56-0.560.330.890.330.221.892.33-0.330.220.110.330.440.22-0.220.44--0.670.220.440.110.22------1.110.890.331.670.220.330.561.440.780.670.110.220.22-0.22-0.330.33--0.110.110.22--0.110.110.11--0.220.330.33------------------0.22-0.330.22-0.110.110.110.220.56---0.110.330.330.11-----0.110.440.22--0.22---0.330.330.330.110.11----0.110.110.220.220.22-------------0.11-0.110.11-0.11-
..............................................................................................................................................................................GGCCGCCCCCTCGCC.............................................................15725.2925.29--0.71-1.140.860.140.71-0.14--0.860.711.14-1.140.43-0.140.71--0.290.86-0.43-------0.430.430.14-0.430.710.290.14-0.290.430.710.29-0.43-0.860.430.57-0.57-0.29--0.290.290.140.140.140.290.140.29------------------0.570.290.290.570.140.43--0.290.14---0.43-----0.290.29-0.14----0.14-0.140.14------0.290.290.29-0.14-----------0.14-0.140.14--------
...........................................................................................................................................................................TCCGGCCGCCCCCTCCA..............................................................174.000.00----------------------------------------------1.00-----------1.00-------------1.00-------1.00---------------------------------------------------------------------
..............................................................................................GGGCCTGCGGGCCGCCGG..........................................................................................................................................183.000.00--------2.00--------1.00------------------------------------------------------------------------------------------------------------------------------------
...GGTGTGGGGCGGACCCAG.....................................................................................................................................................................................................................................1813.003.00---3.00--------------------------------------------------------------------------------------------------------------------------------------------------
.......................................CAACCCTCCAGGTACTTCGT...............................................................................................................................................................................................2012.002.00---------------------2.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCGTC..........................................................1912.001.00-----1.00---------------------------------------------------------------------------1.00--------------------------------------------------------------------
..................................................GTACTTCGTGCGGCCCGG......................................................................................................................................................................................1812.002.00---------------------------------2.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................CCGGCCGCCCCCTCGCC.............................................................1721.501.50-----------------------------------------------1.50------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCCGG..........................................................1951.2042.200.20--0.80------------------------------------------------------0.20-------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCCGCC.........................................................2051.2042.20--0.20--------------0.200.20----------------------------------------------------------------------------0.20----------------------------------0.20-----0.20-------------
....GTGTGGGGCGGACCCAGG....................................................................................................................................................................................................................................1811.001.00---------------------------------------------------------1.00--------------------------------------------------------------------------------------------
............CGGACCCAGGAGATGAAATGA.........................................................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------1.00--------------------------------------------------------------------------
..........................................................................................................................................................................CTCCGGCCGCCCCCTCCA..............................................................181.000.00-------------------------------1.00----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................GGCCGCCCCCTCGCCGGC..........................................................181.000.00--------------------------------------------------------------------1.00---------------------------------------------------------------------------------
.................................................................................................................CCGGGCGGCGGGCGGGAGA......................................................................................................................191.000.00------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................TCCGGCCGCCCCCTCGCCAGTG.........................................................221.000.00-----------------------------1.00------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCCT...........................................................1851.0042.200.60--------------0.20-----------------------------------------------------------------------------------------------------------------------0.20--------------
.........................TGAAATGACAACGTCAACCCTCC..........................................................................................................................................................................................................2311.001.00---------------------------------------------------------------1.00--------------------------------------------------------------------------------------
........................................................................................................................................................................................................TGTCTGTTTCCACGCGCTCGGA............................2211.001.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................GCCGCCCCCTCGCCGG...........................................................161.000.00---------------------------1.00--------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................CTCGGAGCCGGGTGGCCT................181.000.00-----------------------------------------------------1.00------------------------------------------------------------------------------------------------
........................................................................................................................GCGGGCGGGTGGTCAGG.................................................................................................................1711.001.00-------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCG............................................................1711.001.00--------------------------------------------1.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................................................CGCTCCGGCCGCCCCCGGG...............................................................191.000.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...........GCGGACCCAGGAGATGAAATGATA.......................................................................................................................................................................................................................241.000.00---------------1.00--------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCCCTCGCCGCTTCCGCCCGT.................................................2111.001.00-------------------------------------------------1.00----------------------------------------------------------------------------------------------------
...........................AAATGACAACGTCAACCCTCCAG........................................................................................................................................................................................................2311.001.00------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................................AGCCGGGCGGCGGGCGCCTG.......................................................................................................................201.000.00--------------------------------1.00---------------------------------------------------------------------------------------------------------------------
..........GGCGGACCCAGGAGATGA..............................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------1.00-------------------------------------------------------------------------
.......................................................................................GGCAGCGGGGCCTGCGA..................................................................................................................................................171.000.00--------------------------------------------------------------1.00---------------------------------------------------------------------------------------
..............................................................................................................................GGGTGGTCAGGTGGGTGTT.........................................................................................................191.000.00-------------------------------1.00----------------------------------------------------------------------------------------------------------------------
........................................................................ACTTCGGAGGCCGAAGGC................................................................................................................................................................1811.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................GCCGCCCCCTCGCCGCGCG........................................................191.000.00---------------------------------------------------------------------1.00--------------------------------------------------------------------------------
...........................AAATGACAACGTCAACCCCCAG.........................................................................................................................................................................................................221.000.00-----------------------------------------------------------------------------1.00------------------------------------------------------------------------
.........................................................................................................................CGGGCGGGTGGTCAGCC................................................................................................................171.000.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................CCGGGCGGCGGGCGGGAA.......................................................................................................................181.000.00--------------------------------------------------------------------------1.00---------------------------------------------------------------------------
.....................................................CTTCGTGCGGCCCGGC.....................................................................................................................................................................................1611.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GTGTCTGTTTCCACGCGCTCGG.............................2211.001.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCGTCA.........................................................2011.001.00------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCGGAC.........................................................2011.001.00----------------------------------------------------------------------------------1.00-------------------------------------------------------------------
............................................................................................................................................................................................................TGTTTCCACGCGCTCGGAGCCGGGCGGC..................281.000.00--------------------------------1.00---------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................GGCCGCCCCCTCGCCGGTCG........................................................201.000.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................ACCCCGCTCCGGCCGGGC....................................................................181.000.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................GCCTGCGGGCCGCAGAGC........................................................................................................................................1811.001.00-----------------------------------------------------------------------1.00------------------------------------------------------------------------------
..........GGCGGACCCAGGAGATGAAATGA.........................................................................................................................................................................................................................2311.001.00------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
......GTGGGGCGGACCCAGGAGATGA..............................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------1.00----------------------------------------------------------------------------------
.......................................................................................GGCAGCGGGGCCTGCGGGCCTAA............................................................................................................................................231.000.00----------------------------------------------------------------------1.00-------------------------------------------------------------------------------
.....TGTGGGGCGGACCCATTTG..................................................................................................................................................................................................................................191.000.00-----------------------------1.00------------------------------------------------------------------------------------------------------------------------
.....................................................................................................CGGGCCGCAGAGCCGGGCGG.................................................................................................................................2011.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCCC...........................................................1850.8042.200.40--------------------------------------------------0.20---0.20----------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCCGC..........................................................1950.8042.200.20-----0.20-------------0.20-0.20-------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCT............................................................1750.8042.20----------0.40--------------------------------------------------------------------------------0.40----------------------------------------------------------
..............................................................................................................................................................................GGCCGCCCCCTCGCCCGCC.........................................................1970.7125.29-----0.14--------------------0.14-------------------------0.14--0.14-----0.14----------------------------------------------------------------------------------------
..................CAGGAGATGAAATGACAA......................................................................................................................................................................................................................1820.500.50------------------------------------------------------------------------------------------------------0.50-----------------------------------------------
..............................................................................................................................................................................GGCCGCCCCCTCGCCTG...........................................................1770.4325.29--------------------------0.14-----------------------------0.14--------------------------------------------------------------------0.14------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCCGGC.........................................................2050.4042.20-------------0.20----0.20-----------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCTG...........................................................1850.4042.200.20-----------0.20-----------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCA............................................................1750.4042.20----------------------------------------------------0.20-----------------------------------------------------0.20-------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCTGTC.........................................................2050.4042.20-------------------------0.20----------------0.20-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................GGCCGCCCCCTCGCCA............................................................1670.2925.29--0.14----------0.14----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................GGCCGCCCCCTCGCCCGG..........................................................1870.2925.29----------------0.14--------------------------------------------------------------------------------------------------------------------------0.14----------
..............................................................................................................................................................................GGCCGCCCCCTCGCCCT...........................................................1770.2925.29-----------------------------------------------------0.14-------------------------------------------------------------------0.14----------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCACG...........................................................1890.2229.44--------0.11------------------------------------------------------------------------------------------------------------------------------------------0.11--
.............................................................................................................................................................................CGGCCGCCCCCTCGCAC............................................................1790.2229.44----------------------------------------------------------------------------------------------------------0.11-------------------------------------0.11-----
.............................................................................................................................................................................CGGCCGCCCCCTCGCTCG...........................................................1890.2229.44--0.11--------------------------------------------------------------------------------------------------------------------------------------------------0.11
.............................................................................................................................................................................CGGCCGCCCCCTCGCCAA...........................................................1850.2042.20-----------------------------------------------------------------------------------------------0.20------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCCCC..........................................................1950.2042.20-----------------------------------------------------------------------------------------------------------------0.20------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCTGT..........................................................1950.2042.20----------0.20-------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCCTT..........................................................1950.2042.20------------------------------------------------------------------------------------------------------------------------------------0.20-----------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCCGTT.........................................................2050.2042.20-----------------------------------------------------------------------------------------------0.20------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCCCG..........................................................1950.2042.20--------0.20---------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCCAGTG.........................................................2050.2042.20-----------------------0.20------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................GGCCGCCCCCTCGCCAGT..........................................................1870.1425.29-----------------------------------------------------0.14------------------------------------------------------------------------------------------------
..............................................................................................................................................................................GGCCGCCCCCTCGCCCGAT.........................................................1970.1425.29----------------------------------------------------------------------------------------------------------0.14-------------------------------------------
..............................................................................................................................................................................GGCCGCCCCCTCGCCCGC..........................................................1870.1425.29-----------------------------------------------------------------------------------------------------------------------------------------0.14------------
..............................................................................................................................................................................GGCCGCCCCCTCGCCAA...........................................................1770.1425.29-----------------------------------------------------------------------------------------------------------------0.14------------------------------------
..............................................................................................................................................................................GGCCGCCCCCTCGCCCCT..........................................................1870.1425.29-------------------------------------------------------------------------------------------------------------------------0.14----------------------------
...............................................................................................................AGCCGGGCGGCGGGC............................................................................................................................1580.120.12----------------------------------------------------------------------------------------------------------------------------------------------0.12-------
.............................................................................................................................................................................CGGCCGCCCCCTCGCTCGT..........................................................1990.1129.44---0.11--------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCA.............................................................1690.1129.44------0.11-----------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
CGGGGTGTGGGGCGGACCCAGGAGATGAAATGACAACGTCAACCCTCCAGGTACTTCGTGCGGCCCGGCCCGACTTCGGAGGCCGAAGGCAGCGGGGCCTGCGGGCCGCAGAGCCGGGCGGCGGGCGGGTGGTCAGGTGGGCGCCTCCCAGCCCCGGCCTCGCGACCCCGCTCCGGCCGCCCCCTCGCCGCTTCCGCCCGTGTCTGTTTCCACGCGCTCGGAGCCGGGTGGCATCTCCACCCTCAGGCCT
..........................................................................................(((((((((....))))...(((..(((((((((((((((.((.((((((((........))))..)))).)).)))).)).))).)))))).))).)))))..........................................................
.........................................................................................90....................................................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
TAX577589(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
TAX577740(Rovira)
total RNA. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040029(GSM532914)
G026T. (cervix)
SRR189787SRR029129(GSM416758)
SW480. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040035(GSM532920)
G001T. (cervix)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR040016(GSM532901)
G645N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
.................................................................................................................................................................................................GTGGAAACAGACACGGGCGG..................................... 2016.006.00-6.00----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GGCGGCGGGCGGGTGGGGGC.................................................................................................................. 202.000.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GGCGGCGGGCGGGTGGGGG................................................................................................................... 191.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CTGTTTCCACGCGCTCGT............................. 181.000.00------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GCCTCCCAGCCCCGGATT.......................................................................................... 181.000.00------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................................................CGGCCGCCCCCTCGCAAGG.......................................................... 1991.000.00----------------------------1.00-------------------------------------------------------------------------------------------------------------------------
..............................................................................................................GAGCCGGGCGGCGGGCGGC......................................................................................................................... 191.000.00------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................CGGGCGGCGGGCGGGTC....................................................................................................................... 171.000.00------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................CCCCGCTCCGGCCGCCGG................................................................... 181.000.00-------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.............................................CGCACGAAGTACCTGGA............................................................................................................................................................................................ 1711.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................GCCGGGCGGCGGGCGGGGA....................................................................................................................... 191.000.00-----------------------------------------------------------------------------------1.00------------------------------------------------------------------
..................................................................................................................................................................................GCCCCCTCGCCGCTTACCA..................................................... 191.000.00-------------------------------------------------------------------------1.00----------------------------------------------------------------------------
......................................................................................................................................................................................................................................GCATCTCCACCCTCAGGT.. 181.000.00-------------------------------------------------------------------------------1.00----------------------------------------------------------------------
.................................................................................................................................................................................GAAGCGGCGAGGGGGCG........................................................ 1720.500.50-------------------------------------------------------------------------------------------------------0.50----------------------------------------------