ID: uc002eux.5
GENE: PSMB10(2)
chr16:67970166-67970350-


(2)
AGO1.ip
(3)
AGO2.ip
(1)
AGO3.ip
(10)
B-CELL
(1)
BRAIN
(23)
BREAST
(33)
CELL-LINE
(3)
CERVIX
(1)
FIBROBLAST
(6)
HEART
(2)
HELA
(3)
LIVER
(2)
OTHER
(16)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
TCCCTCACGCACGCAAGACCGGGACCACCATCGCGGGCCTGGTGTTCCAAGTGAGCAGCGGGGAGGGACGGGGAGCTGGAGGGGAGCCGAGAGTATCGAGCAGGCACTGAAGCTGCGGTCCCTCCCTCTCCTCAGGACGGGGTCATTCTGGGCGCCGATACGCGAGCCACTAACGATTCGGTCGT
...................................................((((.((.((((((((((..((.(((...((....))...))).))..(((.((......))))).)))))))))))).))))...................................................
..................................................51..................................................................................135................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189782SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR343334DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR029129(GSM416758)
SW480. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040010(GSM532895)
G529N. (cervix)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR191490(GSM715600)
15genomic small RNA (size selected RNA from t. (breast)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR029125(GSM416754)
U2OS. (cell line)
.................................................................................................................TGCGGTCCCTCCCTCTCCTCAGT.................................................23125.0011.00--2.00-4.002.00---2.00-1.00-1.00------1.00-----1.00-1.00-------------1.00--1.00--1.00-1.001.00---1.00----1.00-------1.00----------1.00-------------------1.00-----
.................................................................................................................TGCGGTCCCTCCCTCTCCTCAG..................................................22111.0011.00--2.00--1.002.00-1.001.00----1.00---1.00----------------------------------------1.00----------1.00----------------------------------
.................................................................................................................TGCGGTCCCTCCCTCTCCTCAGA.................................................23110.0011.00-----------1.00---------2.00-1.00--------1.00-------------1.00-----------------------------1.00-1.00-----1.00----------1.00---------
..................................................................................................................GCGGTCCCTCCCTCTCCTCAGT.................................................2218.001.00------2.00--------------------1.00-------------------1.00----1.00----------------1.00------------------1.00---------------1.00
...................................................TGAGCAGCGGGGAGGGACGGGGAGC.............................................................................................................2517.007.003.00-2.001.00---------------------------------------------------------------------------------------1.00-------------
............................................................................TGGAGGGGAGCCGAGAGTATCGA......................................................................................2315.005.004.00-------------1.00------------------------------------------------------------------------------------------
..................................................................................................................GCGGTCCCTCCCTCTCCTCAGA.................................................2214.001.00--------------------------1.00-----------1.00------------------------1.00---1.00-------------------------------------
..................................................GTGAGCAGCGGGGAGGGACGGA.................................................................................................................224.000.00-------4.00-------------------------------------------------------------------------------------------------
...................................................................ACGGGGAGCTGGAGGCTT....................................................................................................183.000.00----------------------2.00---------------------------------------1.00------------------------------------------
.................................................................................................................TGCGGTCCCTCCCTCTCCTCA...................................................2113.003.00--------1.00----1.00-------------1.00-----------------------------------------------------------------------------
....................................................GAGCAGCGGGGAGGGAGTG..................................................................................................................192.000.00----------------2.00----------------------------------------------------------------------------------------
............................................................................TGGAGGGGAGCCGAGAGTATCGAG.....................................................................................2412.002.00------------1.00------------------1.00-------------------------------------------------------------------------
..................................................GTGAGCAGCGGGGAGGGACGGG.................................................................................................................2212.002.00----------------------------1.00----------1.00-----------------------------------------------------------------
..................................................GTGAGCAGCGGGGAGGGACG...................................................................................................................2012.002.00---------------1.00-----------------------------------------1.00-----------------------------------------------
...................................................................................................................CGGTCCCTCCCTCTCCTCAGA.................................................2112.002.002.00--------------------------------------------------------------------------------------------------------
..................................................GTGAGCAGCGGGGAGGGACGGGA................................................................................................................2312.002.00---2.00-----------------------------------------------------------------------------------------------------
...................................................................................................................CGGTCCCTCCCTCTCCTCAG..................................................2012.002.00--------1.00---1.00--------------------------------------------------------------------------------------------
...................................................TGAGCAGCGGGGAGGGACGGGA................................................................................................................222.000.00---2.00-----------------------------------------------------------------------------------------------------
.................................................................................................................TGCGGTCCCTCCCTCTCCTCCGT.................................................2312.001.00-------------------------------------------------------------------------1.00-----------------------1.00-------
.................................CGGGCCTGGTGTTCCAAGACGG..................................................................................................................................222.000.00---------------1.00---------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................GGGCGCCGATACGCGTCC..................181.000.00-------------------------------------------1.00-------------------------------------------------------------
.................................................................................................................TGCGGTCCCTCCCTCTCCTC....................................................2011.001.00----------------------------------------------------------------------------------1.00----------------------
...................................................................ACGGGGAGCTGGAGGCTA....................................................................................................181.000.00--------------------------------------------------------1.00------------------------------------------------
.................................................................................................................TGCGGTCCCTCCCTCTCCTCAGAA................................................2411.0011.00-------------------------------1.00-------------------------------------------------------------------------
..................................................................................................................GCGGTCCCTCCCTCTCCTCAGAA................................................2311.001.00-------------------------------------------------1.00-------------------------------------------------------
............................................................................TGGAGGGGAGCCGAGAGTAT.........................................................................................2011.001.00-----------------------------------------1.00---------------------------------------------------------------
...................................................................ACGGGGAGCTGGAGGGCCGG..................................................................................................201.000.00------------------------1.00--------------------------------------------------------------------------------
..............AAGACCGGGACCACCATC.........................................................................................................................................................1811.001.00----------------------------------------------------------1.00----------------------------------------------
...........................CCATCGCGGGCCTGGTGTTT..........................................................................................................................................201.000.00-----------------------------------------------------------------------1.00---------------------------------
....................................................................................................................GGTCCCTCCCTCTCCTCAGA.................................................201.000.00------------------------------------------------------------------------------------------------------1.00--
............................................................................TGGAGGGGAGCCGAGAGTAA.........................................................................................201.000.00------------------------------------------------------------------1.00--------------------------------------
.............................................................................GGAGGGGAGCCGAGAGTATCGA......................................................................................2211.001.00--------------------------------------------------------------------------------------------------1.00------
....................................................................CGGGGAGCTGGAGGGGAGCCGTTT.............................................................................................241.000.00------------------------------------------------------------------------------------------1.00--------------
.........................................................................................................................................CGGGGTCATTCTGGGCGCCGATACGCGAGCC.................3111.001.00--------------------------------1.00------------------------------------------------------------------------
.................................CGGGCCTGGTGTTCCAA.......................................................................................................................................1711.001.00---------------------------------1.00-----------------------------------------------------------------------
..............................................................................GAGGGGAGCCGAGAGTATCGAG.....................................................................................2211.001.00------------------------------------------------------------------------1.00--------------------------------
..................................................................................................................GCGGTCCCTCCCTCTCCTCCGT.................................................221.000.00------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................TGCGGTCCCTCCCTCTCCTCAGTTAT..............................................2611.0011.00----------------------------------------------------------------------------------------------1.00----------
..................................................GTGAGCAGCGGGGAGGGACGGTAT...............................................................................................................241.000.00--------------------------------------------------------------------------------1.00------------------------
...............................................................................................................................................CATTCTGGGCGCCGATACGCG.....................2111.001.00--------------------------------------------------------------------------------------1.00------------------
..................................................................................................................GCGGTCCCTCCCTCTCCTCAGG.................................................2211.001.00-----------------------------1.00---------------------------------------------------------------------------
.............CAAGACCGGGACCACCAT..........................................................................................................................................................1811.001.00-------------1.00-------------------------------------------------------------------------------------------
..................................................GTGAGCAGCGGGGAGGGAA....................................................................................................................191.000.00--1.00------------------------------------------------------------------------------------------------------
............................................................................TGGAGGGGAGCCGAGAGTATCGAAA....................................................................................2511.005.00------------------------------1.00--------------------------------------------------------------------------
...................................................................................................................CGGTCCCTCCCTCTCCTCAGT.................................................2111.002.00------------------------------------------------------1.00--------------------------------------------------
.......................ACCACCATCGCGGGCCTGGTGTTCCAAGACGG..................................................................................................................................321.000.00-----------------------------------------------------1.00---------------------------------------------------
.........................CACCATCGCGGGCCTGGT..............................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------------------1.00---
..................................................GTGAGCAGCGGGGAGGGACGTAA................................................................................................................2311.002.00-------------------------------------------------------------------------------------1.00-------------------
...............................................................................AGGGGAGCCGAGAGTATCGAGCA...................................................................................2311.001.00--------------1.00------------------------------------------------------------------------------------------
.......CGCACGCAAGACCGGGACCACT............................................................................................................................................................221.000.00--------------------------------------------1.00------------------------------------------------------------
.................................................................................................................TGCGGTCCCTCCCTCTCCTCAGG.................................................2311.001.00-----------------------1.00---------------------------------------------------------------------------------
........................................................................................................CACTGAAGCTGCGGTCCCTCCCT..........................................................2311.001.00----------------------------------------1.00----------------------------------------------------------------
............................................................................TGGAGGGGAGCCGAGAGTATCGAGC....................................................................................2511.001.00-------------------------1.00-------------------------------------------------------------------------------
........................................................................................................CACTGAAGCTGCGGTCCCTCCCTTA........................................................2511.001.00-----------------------------------------------------------------------------------------1.00---------------
..................................................................................................................GCGGTCCCTCCCTCTCCTCAG..................................................2111.001.00-----------1.00---------------------------------------------------------------------------------------------
..................................................GTGAGCAGCGGGGAGGGACGGGGACT.............................................................................................................261.000.00---------------------------------------------------------------------------------------1.00-----------------
........................................................................................................CACTGAAGCTGCGGTCCCTCC............................................................2111.001.00------------------------------------1.00--------------------------------------------------------------------
.......................................................................................................................................GACGGGGTCATTCTGGGCGC..............................2011.001.00-------------------------------------1.00-------------------------------------------------------------------
..........ACGCAAGACCGGGACCAC.............................................................................................................................................................1811.001.00-----------------------------------------------------------------------------1.00---------------------------
.............................................................................................................................................................ATACGCGAGCCACTAACGATTC......2211.001.00---------------------------------------------------------------------------1.00-----------------------------
.......................................................CAGCGGGGAGGGACGGGGAGC.............................................................................................................2111.001.00------------------------------1.00--------------------------------------------------------------------------
...................................................TGAGCAGCGGGGAGGGACGGGGAGCTGGAGGGGAGCCGAGAGTATCGAGCAGGCACTGAAGCTGCGGTCCCTCCCTCTCCTCAGT.................................................851.000.00-------------------------------------------------------------------------------------------------------1.00-
..................................................GTGAGCAGCGGGGAGGGAC....................................................................................................................1911.001.00--------------------1.00------------------------------------------------------------------------------------
....................................................GAGCAGCGGGGAGGGTT....................................................................................................................171.000.00----------------------------------------------------------------1.00----------------------------------------
............................................................................TGGAGGGGAGCCGAGAGTATCGT......................................................................................231.000.00------------------------------------------------------------------------------------------------1.00--------

Antisense strand
TCCCTCACGCACGCAAGACCGGGACCACCATCGCGGGCCTGGTGTTCCAAGTGAGCAGCGGGGAGGGACGGGGAGCTGGAGGGGAGCCGAGAGTATCGAGCAGGCACTGAAGCTGCGGTCCCTCCCTCTCCTCAGGACGGGGTCATTCTGGGCGCCGATACGCGAGCCACTAACGATTCGGTCGT
...................................................((((.((.((((((((((..((.(((...((....))...))).))..(((.((......))))).)))))))))))).))))...................................................
..................................................51..................................................................................135................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189782SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR343334DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040028(GSM532913)
G026N. (cervix)
SRR029129(GSM416758)
SW480. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR040010(GSM532895)
G529N. (cervix)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR191546(GSM715656)
152genomic small RNA (size selected RNA from . (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR191490(GSM715600)
15genomic small RNA (size selected RNA from t. (breast)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR029125(GSM416754)
U2OS. (cell line)
..............................................................................................................................................ATCGGCGCCCAGAATGA.......................... 1713.003.00-3.00-------------------------------------------------------------------------------------------------------
....................................................................................................................................................................GACCGAATCGTTAGTGGCT.. 1913.003.00-3.00-------------------------------------------------------------------------------------------------------
....................................CGCTGCTCACTTGGAACACCAGGC............................................................................................................................. 2413.003.00-3.00-------------------------------------------------------------------------------------------------------
.....................................................................................................................GACCCCGTCCTGAGGAGAGGGAGGGAC......................................... 2712.002.00-----------------2.00---------------------------------------------------------------------------------------
.....................................................................................CTGCTCGATACTCTCGGC.................................................................................. 1812.002.00-------------------2.00-------------------------------------------------------------------------------------
.............................................................................................GACCGCAGCTTCAGTGCCTGCTCGATA................................................................. 2712.002.00-------------------------------------------------------------1.00------------------------------1.00------------
..................................................................................................................GAGGAGAGGGAGGGACCGC.................................................... 1911.001.00-----1.00---------------------------------------------------------------------------------------------------
................................................................GGGACGGGGAGCTGGCG........................................................................................................ 171.000.00----------------------------------------------------------------------------------------------------1.00----
..................CGCGATGGTGGTCCCGG...................................................................................................................................................... 1711.001.00---------------------------------------------------------------------------------------------1.00-----------
...........................................................................CTCTCGGCTCCCCTCCAG............................................................................................ 1811.001.00----------1.00----------------------------------------------------------------------------------------------
..........................................................................GCTGGAGGGGAGCCGAGAC............................................................................................ 191.000.00------------------------1.00--------------------------------------------------------------------------------
....................................................................................................................................................................ACCGAATCGTTAGTGGCT... 1811.001.00-----------------------------------1.00---------------------------------------------------------------------
.......................................CTCACTTGGAACACCA.................................................................................................................................. 1621.001.00---------------------------------------------------------------------------------1.00-----------------------
....................................................................CGGGGAGCTGGAGGGGGCC.................................................................................................. 191.000.00-----------------------------------------------------------------1.00---------------------------------------
.....................................................................................................................................GCGTATCGGCGCCCAGAATGACCCCGTCCT...................... 3011.001.00-----------------------------------------------------------------------------------1.00---------------------
......................................................................................................GGGACCGCAGCTTCAGTGCC............................................................... 2011.001.00----------------------------------1.00----------------------------------------------------------------------
.GGTCTTGCGTGCGTGAGGG..................................................................................................................................................................... 1911.001.00----------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................ACGACCGAATCGTTAGTGGCT 2111.001.00------------------1.00--------------------------------------------------------------------------------------
.............................................................................................................................................CGTATCGGCGCCCAGAATGAC....................... 2111.001.00----------1.00----------------------------------------------------------------------------------------------
..............................TCGCGGGCCTGGTGTGT.......................................................................................................................................... 171.000.00---------------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................................................ACCGAATCGTTAGTGGC... 1711.001.00-----------------------------1.00---------------------------------------------------------------------------
......................................................................................................GGCACTGAAGCTGCGGTCCCTCCCTCTCCTGC................................................... 321.000.00--------------------------------------------------------------------------1.00------------------------------