ID: uc002esr.1_intron_2_0_chr16_67314909_f
GENE: PLEKHG4(3)
chr16:67314859-67315043+


(1)
AGO2.ip 		(8)
B-CELL 		(10)
BRAIN 		(18)
BREAST 		(20)
CELL-LINE 		(10)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(1)
HELA 		(1)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(5)
SKIN 		(4)
UTERUS 		(1)
XRN.ip

Sense strand
AGCAGCCAGGAACTCATCCGCCTCCTGCTGTACCTGCGAAGCATCCCCAGGTTTGAGGGAGGGGGTTGGGAGACTGAGCCTGAGCCAGCTGTGAGGACTGGGAGTCAGGTACTGAACTGAAGCTCACCCCTTTAGGCCCGAAGTACAGGCACTGGGACTGACAGTGCTAGTTGATGCCCGAATTT
...................................................(((((.....(((.((((....)))).)))...((((((....)).))))...)))))............................................................................
..................................................51.........................................................110.........................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR189783TAX577580(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189785SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577746(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040016(GSM532901)
G645N. (cervix)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577579(Rovira)
total RNA. (breast)		SRR189786TAX577589(Rovira)
total RNA. (breast)		SRR040018(GSM532903)
G701N. (cervix)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040008(GSM532893)
G727N. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189787TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343335RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR343336SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040025(GSM532910)
G613T. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		SRR040006(GSM532891)
G601N. (cervix)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR038857(GSM458540)
D20. (cell line)		SRR040032(GSM532917)
G603N. (cervix)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR343337SRR029125(GSM416754)
U2OS. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR038853(GSM458536)
MELB. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................TGAGGGAGGGGGTTGTAT..................................................................................................................1821.000.00----1.00----4.00-----1.00-2.003.002.00-----------1.001.00--1.00----1.00--------1.00------------1.00----1.00---1.00--------------------
.....................................................TGAGGGAGGGGGTTGTATA.................................................................................................................1918.000.004.00--2.00--1.001.001.00--1.003.00--1.001.00----------1.00--------1.00----------------------1.00--------------------------------
.....................................................TGAGGGAGGGGGTTGGATAG................................................................................................................2015.000.009.001.00-1.00--1.00-------1.00----------1.00-------------1.00----------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTGT..................................................................................................................1813.000.001.00--2.00---2.002.00----1.00-1.00---------------1.001.00---------1.00-------------------------1.00-----------------------
.....................................................TGAGGGAGGGGGTTGTA...................................................................................................................1712.000.00---2.005.00---1.00------------1.00--------1.00--1.00------------1.00---------------------------------------------
.....................................................TGAGGGAGGGGGTTGTATG.................................................................................................................197.000.004.001.00----1.00----------------1.00--------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGAGAG................................................................................................................205.000.004.00-----1.00-------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTAGA.................................................................................................................195.000.004.00-------1.00-----------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTAG..................................................................................................................184.000.001.00--1.00---1.00-1.00----------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTGG..................................................................................................................184.000.00---1.00---1.001.00--1.00--------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTGTA.................................................................................................................194.000.00---1.00---1.00--------------------1.001.00--------------------------------------------------------------
.........GAACTCATCCGCCTCCTGCTGTA.........................................................................................................................................................2313.003.00----------3.00---------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTT...................................................................................................................173.000.00---1.00----------1.00----------------------1.00------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTGTT.................................................................................................................193.000.00------1.00------1.00-------1.00----------------------------------------------------------------------
......................................................................................AGCTGTGAGGACTGGGAGTCAGG............................................................................2313.003.00----------3.00---------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTGGG.................................................................................................................193.000.00----------------1.00--------1.00------------1.00-----------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTAGG.................................................................................................................193.000.003.00-------------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTGTG.................................................................................................................192.000.00---1.00--------------------------------------------------------------1.00-------------------------
.....................................................TGAGGGAGGGGGTTGTGGA.................................................................................................................192.000.00---1.00-------1.00--------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGTTAG................................................................................................................202.000.001.00---1.00---------------------------------------------------------------------------------------
.........................................................................................................................................................GGGACTGACAGTGCTAGTTGATGCC.......2512.002.00----------------------------------2.00---------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGAATA.................................................................................................................192.000.002.00-------------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTAAA.................................................................................................................192.000.00---------1.00----------------1.00-----------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGCAT..................................................................................................................182.000.00---------------------------1.00-----------------------1.00----------------------------------------
.....................................................TGAGGGAGGGGGTTGAAGA.................................................................................................................192.000.002.00-------------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTCT..................................................................................................................182.000.00--------------1.00----1.00------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGTGGT...............................................................................................................2141.500.25---0.25----------------------0.250.25---------0.25-0.25------0.25---------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGTAGT...............................................................................................................2141.250.25----------------0.50----------------------0.50-----------------------------------------------0.25----
.....................................................TGAGGGAGGGGGTTGGATAA................................................................................................................201.000.00-----------1.00--------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTTG..................................................................................................................181.000.00------------------------------------------------------------1.00-------------------------------
......................................................GAGGGAGGGGGTTGGATAG................................................................................................................191.000.00---------------------------------------------------------1.00----------------------------------
.....................................................TGAGGGAGGGGGTTGGATGT................................................................................................................201.000.00-------------1.00------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGCAG..................................................................................................................181.000.00----1.00---------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGTTGG................................................................................................................201.000.00-------------1.00------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGAAGG.................................................................................................................191.000.001.00-------------------------------------------------------------------------------------------
......................................................GAGGGAGGGGGTTGGTTCA................................................................................................................191.000.001.00-------------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTGTC.................................................................................................................191.000.00---1.00----------------------------------------------------------------------------------------
........................................................................................................TCAGGTACTGAACTGAATAGC............................................................211.000.00-----------------------------------1.00--------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTCTT.................................................................................................................191.000.00--------------------1.00-----------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGAGGT...............................................................................................................211.000.00--------1.00-----------------------------------------------------------------------------------
...............................................................................................................................................TACAGGCACTGGGACTGACAGT....................2211.001.00--------------------------------------------------------1.00-----------------------------------
......................................................GAGGGAGGGGGTTGGTTTG................................................................................................................191.000.00---------------------------------1.00----------------------------------------------------------
......................................................GAGGGAGGGGGTTGGATTA................................................................................................................191.000.00------------------------------1.00-------------------------------------------------------------
.................................................................................................................................................CAGGCACTGGGACTGAGAGA....................201.000.00------------------------------------------------1.00-------------------------------------------
.....................................................TGAGGGAGGGGGTTGGACT.................................................................................................................191.000.00--------------------------------------1.00-----------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTACC.................................................................................................................191.000.00--------------------1.00-----------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGCTGA................................................................................................................201.000.00----1.00---------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTTA..................................................................................................................181.000.00--------------------------1.00-----------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGAGGCT..............................................................................................................221.000.00---------------------------------------------------------------------1.00----------------------
......................................................GAGGGAGGGGGTTGGATAA................................................................................................................191.000.00-----------------1.00--------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGAGAA................................................................................................................201.000.00------1.00-------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGACTA.................................................................................................................191.000.001.00-------------------------------------------------------------------------------------------
.....................................................................................CAGCTGTGAGGACTGCTGC.................................................................................191.000.00-------------------------------------------------------1.00------------------------------------
.....................................................TGAGGGAGGGGGTTGGTTA.................................................................................................................191.000.00----1.00---------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTCTC.................................................................................................................191.000.00----1.00---------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTGAA.................................................................................................................191.000.00-------1.00------------------------------------------------------------------------------------
......................................................GAGGGAGGGGGTTGGAGAG................................................................................................................191.000.001.00-------------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGTGTG................................................................................................................201.000.00------1.00-------------------------------------------------------------------------------------
........................................................................ACTGAGCCTGAGCCAACC...............................................................................................181.000.00--------------------------------------------1.00-----------------------------------------------
.....................................................TGAGGGAGGGGGTTGTAA..................................................................................................................181.000.00--------------------1.00-----------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGTATT.................................................................................................................191.000.00--------------1.00-----------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGCAAA.................................................................................................................191.000.00--------------------------------------------------1.00-----------------------------------------
.....................................................TGAGGGAGGGGGTTGCAA..................................................................................................................181.000.00-------------------------------------------------------------1.00------------------------------
.........................................................................................................................................................GGGACTGACAGTGCTAGTTGATGG........241.000.00-----------------------------------------------------1.00--------------------------------------
.....................................................TGAGGGAGGGGGTTGCGTA.................................................................................................................191.000.00------1.00-------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGAT..................................................................................................................181.000.00----------------1.00---------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGTGG................................................................................................................2040.750.25--------0.25-------0.25-----------0.25---------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGTTGT...............................................................................................................2140.500.25------0.25-------------------------------------------------------------------------------0.25-----
.....................................................TGAGGGAGGGGGTTGGGGGGT...............................................................................................................2140.500.25---0.25---------------------------------0.25------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGGGG................................................................................................................2040.500.25---------0.25---------------------------------------------------------------------------0.25------
........................................................................................................................................................TGGGACTGACAGTGCT.................1630.330.33-----------------------------------------------------------------------------------0.33--------
..................................................................................AGCCAGCTGTGAGGACT......................................................................................1740.250.25------------------------------------------------------------------------------------0.25-------
.....................................................TGAGGGAGGGGGTTGGGTAAA...............................................................................................................2140.250.25-------0.25------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGTTGG...............................................................................................................2140.250.25-----------------0.25--------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGG...................................................................................................................1740.250.25----0.25---------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGTAGA...............................................................................................................2140.250.25----0.25---------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGGCTG...............................................................................................................2140.250.25---0.25----------------------------------------------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGGG.................................................................................................................1940.250.25---------------------------------------0.25----------------------------------------------------
.....................................................TGAGGGAGGGGGTTGGGTAG................................................................................................................2040.250.250.25-------------------------------------------------------------------------------------------

Antisense strand
AGCAGCCAGGAACTCATCCGCCTCCTGCTGTACCTGCGAAGCATCCCCAGGTTTGAGGGAGGGGGTTGGGAGACTGAGCCTGAGCCAGCTGTGAGGACTGGGAGTCAGGTACTGAACTGAAGCTCACCCCTTTAGGCCCGAAGTACAGGCACTGGGACTGACAGTGCTAGTTGATGCCCGAATTT
...................................................(((((.....(((.((((....)))).)))...((((((....)).))))...)))))............................................................................
..................................................51.........................................................110.........................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189784SRR189783TAX577580(Rovira)
total RNA. (breast)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189785SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		TAX577746(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040016(GSM532901)
G645N. (cervix)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR040012(GSM532897)
G648N. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577579(Rovira)
total RNA. (breast)		SRR189786TAX577589(Rovira)
total RNA. (breast)		SRR040018(GSM532903)
G701N. (cervix)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040008(GSM532893)
G727N. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189787TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343335RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR343336SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040025(GSM532910)
G613T. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		SRR040006(GSM532891)
G601N. (cervix)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR038857(GSM458540)
D20. (cell line)		SRR040032(GSM532917)
G603N. (cervix)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR343337SRR029125(GSM416754)
U2OS. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR038853(GSM458536)
MELB. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................GGGAGACTGAGCCTGAG..................................................................................................... 17328.500.00259.5014.5047.00--4.00-----------------0.50-------------------0.50-0.50-1.00------0.50---------------0.50---------------------
...................................................................GGGAGACTGAGCCTGACCG................................................................................................... 1969.500.0015.5045.004.50--3.50---------------------------------------1.00----------------------------------------------
...................................................................GGGAGACTGAGCCTGAGAT................................................................................................... 1957.500.0034.002.505.000.50---0.50---0.501.50--0.50------1.001.001.00-----------0.50----1.000.500.50--------1.00-----1.00-----1.001.00------0.500.50--0.500.500.50---0.50---------
...................................................................GGGAGACTGAGCCTGACCCG.................................................................................................. 2050.500.002.0045.50---3.00--------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGA.................................................................................................... 1847.500.0036.50-5.50--------0.50---0.50-----0.501.00-0.50---0.500.50-------0.50-------------------------------------0.50----0.50-----------
...................................................................GGGAGACTGAGCCTGACCGA.................................................................................................. 2015.000.000.5012.001.00---------------------0.50-----------------------------0.50---------------0.50---------------------
...................................................................TCAGGCTCAGTCTCCC...................................................................................................... 1626.006.004.500.501.00-----------------------------------------------------------------------------------------
..................................................................TCAGGCTCAGTCTCCCA...................................................................................................... 1716.006.003.00-3.00-----------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACG.................................................................................................... 184.500.001.502.50---0.50--------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGATCCC.................................................................................................. 193.830.002.171.000.33--------------------------------------------------------------------------------------0.170.17-
...................................................................GGGAGACTGAGCCTGAGT.................................................................................................... 183.500.001.50-2.00-----------------------------------------------------------------------------------------
..................................................................TGGGAGACTGAGCCTGACCG................................................................................................... 203.000.002.001.00------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGAA................................................................................................... 193.000.001.50------0.50--------------------0.500.50--------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGATA.................................................................................................. 202.500.000.50----------0.50-------------0.50--------------0.50----------------------------------------0.50----------
...................................................................GGGAGACTGAGCCTGACCT................................................................................................... 192.500.00-2.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACCTG.................................................................................................. 202.000.00-2.00------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGCG................................................................................................... 192.000.00-2.00------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGCCG.................................................................................................. 202.000.000.501.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGTCG.................................................................................................. 201.500.001.50-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACCGT.................................................................................................. 201.500.00-1.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACCCA.................................................................................................. 201.500.00-1.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACGAT.................................................................................................. 201.500.001.000.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACCA................................................................................................... 191.500.00-1.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGATT.................................................................................................. 201.500.00---0.50--------------------0.50------------------------------------------------------0.50------------
.................................................................TTGGGAGACTGAGCCTGAT..................................................................................................... 191.000.001.00-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACCTT.................................................................................................. 201.000.00-1.00------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACCCT.................................................................................................. 201.000.00-1.00------------------------------------------------------------------------------------------
.................................................................TTGGGAGACTGAGCCTGAAT.................................................................................................... 201.000.001.00-------------------------------------------------------------------------------------------
..................................................................TGGGAGACTGAGCCTGATA.................................................................................................... 191.000.001.00-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGAAA.................................................................................................. 201.000.00----------------------0.50-------------0.50-------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACCGG.................................................................................................. 201.000.00-1.00------------------------------------------------------------------------------------------
..................................................................TGGGAGACTGAGCCTGATT.................................................................................................... 191.000.001.00-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGGG..................................................................................................... 171.000.001.00-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGCA................................................................................................... 191.000.000.500.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGG.................................................................................................... 181.000.001.00-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGG.................................................................................................... 181.000.000.500.50------------------------------------------------------------------------------------------
..................................................................TGGGAGACTGAGCCTGACGT................................................................................................... 201.000.001.00-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGGAT.................................................................................................... 181.000.00---------------------------------------------------------------1.00----------------------------
...................................................................GGGAGACTGAGCCTGACGA................................................................................................... 191.000.000.500.50------------------------------------------------------------------------------------------
....................................................................TCAGGCTCAGTCTCC...................................................................................................... 1560.670.670.67-------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGATC.................................................................................................... 170.670.00-0.33---------------------------0.17----------0.17---------------------------------------------------
...................................................................GGGAGACTGAGCCTGACAG................................................................................................... 190.500.00-0.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACACG.................................................................................................. 200.500.00-0.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGCTG.................................................................................................. 200.500.00-0.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGATAAA.................................................................................................. 200.500.00-------------------------------------------0.50------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGCGA.................................................................................................. 200.500.000.50-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGATTT................................................................................................... 190.500.000.50-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACTTG.................................................................................................. 200.500.000.50-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGTT................................................................................................... 190.500.000.50-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACCAT.................................................................................................. 200.500.000.50-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACA.................................................................................................... 180.500.00-----0.50--------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACCAG.................................................................................................. 200.500.00-0.50------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGATCCG.................................................................................................. 190.500.00-0.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACCTA.................................................................................................. 200.500.00-0.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGC.................................................................................................... 180.500.00-0.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGCGT.................................................................................................. 200.500.00-0.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACTCA.................................................................................................. 200.500.00-0.50------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGTTT.................................................................................................. 200.500.000.50-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACC.................................................................................................... 180.500.00-0.50------------------------------------------------------------------------------------------
..................AGGTACAGCAGGAGGCG...................................................................................................................................................... 1720.500.50--------------------------------------------0.50-----------------------------------------------
...................................................................GGGAGACTGAGCCTGAGTAA.................................................................................................. 200.500.000.50-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGAGAG................................................................................................... 190.500.00--------------------------------------------------------------------------0.50-----------------
...................................................................GGGAGACTGAGCCTGATCC................................................................................................... 190.500.00--0.50-----------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGATCC................................................................................................... 180.500.000.17-----------------0.17---------------------0.17---------------------------------------------------
...................................................................GGGAGACTGAGCCTGACTCG.................................................................................................. 200.500.000.50-------------------------------------------------------------------------------------------
...................................................................GGGAGACTGAGCCTGACGAC.................................................................................................. 200.500.00-----------------------------------------0.50--------------------------------------------------
....................................................................GGAGACTGAGCCTGATCAC.................................................................................................. 190.330.000.33-------------------------------------------------------------------------------------------
...................CAGGTACAGCAGGAGGC..................................................................................................................................................... 1750.200.20----------------------------------------------------------------------------------------0.20---
....................................................................GGAGACTGAGCCTGAGAT................................................................................................... 180.170.00----------------------0.17---------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGAGCT................................................................................................... 180.170.00---------------------0.17----------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGAACCG.................................................................................................. 190.170.00-0.17------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGATGA................................................................................................... 180.170.000.17-------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGAACGC.................................................................................................. 190.170.000.17-------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGAACTG.................................................................................................. 190.170.00-0.17------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGAGA.................................................................................................... 170.170.000.17-------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGAG..................................................................................................... 160.170.00-0.17------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGATGCG.................................................................................................. 190.170.00-0.17------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGATTAA.................................................................................................. 190.170.000.17-------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGAACG................................................................................................... 180.170.000.17-------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGATCCA.................................................................................................. 190.170.000.17-------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGATAC................................................................................................... 180.170.000.17-------------------------------------------------------------------------------------------
....................................................................GGAGACTGAGCCTGATGAT.................................................................................................. 190.170.000.17-------------------------------------------------------------------------------------------
...................AGGTACAGCAGGAGGC...................................................................................................................................................... 1670.140.14-------------------------------------------------------------------------------------------0.14