| (1) B-CELL | (5) BRAIN | (1) BREAST | (18) CELL-LINE | (4) CERVIX | (2) HELA | (2) LIVER | (3) OTHER | (16) SKIN | (1) TESTES |
| GTCGAGTTTCACCCCAACGAGTACCTCCTGGCCTCCGGCAGCTCTGACAGGTGAGGAGGAGGAGCGAGGCGAGTTGCTTGTGACTGCTGTCCTTCACCGCCTTGTCCTCTGTGCGTGTCTCTACTGCCGGTCTGTCGCTGTCTGGGGTGTCATACGTCTGATGATCCTGTGTGGACTGAATTGGATTTCAGCCGAGCCAGGACTGGACCCTGGTCCATCTCCCCTGGCTCTGGTTCCCTGGCCCCAGTGTCCCAGGTCTGTGGCTTCATGGGCAGGTTGGGACCCAAGGCATCTAGTGGGACCCCATAGGGCAGGGAGGCTCGTGGCTGTTGGGGCCAACCCTGGGGCCAGGGCCATCGGGCCGAGCCTCCCCCTTGCAAAGTCAGGGCCAGCTCTGCCCCAGATGTTGCTCCTGGTGGCCCTGCCCTGGGGGAGAGGTTTCTAGAGAAAAGCTGGCTTCCCAGGGACATGTGGAGGCCAGGATGAGGGATAGGCTTCGCAGCACAGCTTGGCTGCCTTTGCAGGACAATCCGCTTCTGGGACCTGGAGAAGTTCCAGGTGGTGAGCTGCATCG ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................(((((((((((......)).)))))))))..(((((......)))))........................................................................... ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................443......................................................500........................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037938(GSM510476) 293Red. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR330892(SRX091730) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR040018(GSM532903) G701N. (cervix) | GSM450606(GSM450606) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577580(Rovira) total RNA. (breast) | SRR207117(GSM721079) Whole cell RNA. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | GSM532876(GSM532876) G547T. (cervix) | SRR037935(GSM510473) 293cand3. (cell line) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189783 | SRR029129(GSM416758) SW480. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | GSM416733(GSM416733) HEK293. (cell line) | SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin) | SRR189782 | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR037931(GSM510469) 293GFP. (cell line) | GSM450603(GSM450603) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040025(GSM532910) G613T. (cervix) | SRR330871(SRX091709) tissue: skin psoriatic involveddisease state:. (skin) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | GSM359191(GSM359191) HepG2_3pM_5. (cell line) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR207116(GSM721078) Nuclear RNA. (cell line) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040035(GSM532920) G001T. (cervix) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................ACGTCTGATGATCCTGTGTGGACTGAAT......................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 17.00 | 17.00 | - | - | - | 3.00 | 2.00 | - | - | 2.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCTGGCTTCCCAGGGCGA......................................................................................................... | 22 | 11.00 | 0.00 | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCTGGCTTCCCAGGGCGAA........................................................................................................ | 23 | 7.00 | 0.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCTGGCTTCCCAGGGCGAT........................................................................................................ | 23 | 4.00 | 0.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGAGGGATAGGCT.............................................................................. | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCAGGGACATGTGGC................................................................................................... | 18 | 2.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................TACGTCTGATGATCCTGTGTGGACTGAAT......................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCTGGCTTCCCAGGGCGT......................................................................................................... | 22 | 2.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAAGTTCCAGGTGGTGAG........ | 22 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TCCGGCAGCTCTGACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 17 | 2 | 1.50 | 1.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | 0.50 | - | - | - | - | - | - |
| ................ACGAGTACCTCCTGGCCTCCGGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................ACGTCTGATGATCCTGTGTGGACTG............................................................................................................................................................................................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGGACATGTGGAGGCCAGG............................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................TCTCCCCTGGCTCTGTC.................................................................................................................................................................................................................................................................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ........................................................AGGAGGAGCGAGGCGACGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................CCTTGTCCTCTGTGCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................AGGAGGAGGAGCGAGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGAAGTTCCAGTAA............. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................................................................GGAGGCTCGTGGCTGTT................................................................................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGGAGAGGTTTCGGGA................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................................................................................AGGCATCTAGTGGGACCC.............................................................................................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGAGGGATAGGCTTCGCCGC....................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................GAGGAGGAGGAGCGACCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGGAGGAGGAGCGAGGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................GCCTCCGGCAGCTCTGACAGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................TCATACGTCTGATGATCCTGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................. | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCTGGCTTCCCAGGGCGTT........................................................................................................ | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................CCGCCTTGTCCTCTGTGCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGACATGTGGAGGGTCT............................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCTGGCTTCCCAGGGCG.......................................................................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............AACGAGTACCTCCTGGCCTCCGGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................AGTACCTCCTGGCCTCCGGCAGCCCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGACATGTGGAGGTATA............................................................................................. | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................GAGGAGGAGGAGCGAGGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCTTCTGGGACC.............................. | 15 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................CATAGGGCAGGGAGGC.............................................................................................................................................................................................................................................................. | 16 | 4 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | 0.25 | - |
| ................................CTCCGGCAGCTCTGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 16 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGACCTGGAGAAGTT.................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGAGAAAAGCTGGC..................................................................................................................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - |
| ..................................CCGGCAGCTCTGACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 16 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................GAGGAGGAGCGAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 15 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |
| GTCGAGTTTCACCCCAACGAGTACCTCCTGGCCTCCGGCAGCTCTGACAGGTGAGGAGGAGGAGCGAGGCGAGTTGCTTGTGACTGCTGTCCTTCACCGCCTTGTCCTCTGTGCGTGTCTCTACTGCCGGTCTGTCGCTGTCTGGGGTGTCATACGTCTGATGATCCTGTGTGGACTGAATTGGATTTCAGCCGAGCCAGGACTGGACCCTGGTCCATCTCCCCTGGCTCTGGTTCCCTGGCCCCAGTGTCCCAGGTCTGTGGCTTCATGGGCAGGTTGGGACCCAAGGCATCTAGTGGGACCCCATAGGGCAGGGAGGCTCGTGGCTGTTGGGGCCAACCCTGGGGCCAGGGCCATCGGGCCGAGCCTCCCCCTTGCAAAGTCAGGGCCAGCTCTGCCCCAGATGTTGCTCCTGGTGGCCCTGCCCTGGGGGAGAGGTTTCTAGAGAAAAGCTGGCTTCCCAGGGACATGTGGAGGCCAGGATGAGGGATAGGCTTCGCAGCACAGCTTGGCTGCCTTTGCAGGACAATCCGCTTCTGGGACCTGGAGAAGTTCCAGGTGGTGAGCTGCATCG ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................(((((((((((......)).)))))))))..(((((......)))))........................................................................... ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................443......................................................500........................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037938(GSM510476) 293Red. (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | SRR033712(GSM497057) Burkitt Lymphoma (BL510). (B cell) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR330892(SRX091730) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR040018(GSM532903) G701N. (cervix) | GSM450606(GSM450606) miRNA sequencing raw reads from post-mortem s. (brain) | TAX577580(Rovira) total RNA. (breast) | SRR207117(GSM721079) Whole cell RNA. (cell line) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | GSM532876(GSM532876) G547T. (cervix) | SRR037935(GSM510473) 293cand3. (cell line) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189783 | SRR029129(GSM416758) SW480. (cell line) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | GSM416733(GSM416733) HEK293. (cell line) | SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin) | SRR189782 | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR037931(GSM510469) 293GFP. (cell line) | GSM450603(GSM450603) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040025(GSM532910) G613T. (cervix) | SRR330871(SRX091709) tissue: skin psoriatic involveddisease state:. (skin) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | GSM359191(GSM359191) HepG2_3pM_5. (cell line) | GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain) | SRR207116(GSM721078) Nuclear RNA. (cell line) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040035(GSM532920) G001T. (cervix) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR444049(SRX128897) Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................GCCTCCGGCAGCTCTGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 19 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................................................................................GACCCAAGGCATCTATGT.................................................................................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................CAAGGCGGTGAAGGACAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................CAGTAGAGACACGCACAGAGGACAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCAGGTCCCAGAAGCGGATTGTC........................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................CCCTGGTCCATCTCCCCTAA........................................................................................................................................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................................................................................................................................................................TTGCAAGGGGGAGGC.................................................................................................................................................................................................. | 15 | 6 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |