ID: uc002ely.2_intron_0_0_chr16_57577086_f.5p
GENE: (1)
chr16:57577036-57577285+


(2)
AGO2.ip 		(1)
AGO3.ip 		(1)
B-CELL 		(1)
BREAST 		(10)
CELL-LINE 		(2)
HELA 		(1)
LIVER 		(1)
OTHER 		(3)
SKIN

Sense strand
AGCTCCTTTCAGAGTGACCTGGATTGGATCCTGGGGACAGCATGTCTCAGGTAAATGGACCTGCTGCTGGCTTGGTCACAGACTTCCTGTTGGGCTCCAGGGTGGCCTCTCTTTCCCAACCTGGGAAATAGGGTTACTATAGCATTTCTTAGGGCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTTTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCCACCTC
...............................................................(((.((((...)))))))...(((((....(((....(((((((.((.((((((.....)))))).)))))))))..)))......)))))................................................................................................
...............................................................64................................................................................................................178......................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189782SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189787SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		TAX577739(Rovira)
total RNA. (breast)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTAC............................................................................2610.000.006.004.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTACAG..........................................................................268.000.006.002.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTAC............................................................................245.000.002.002.00---------------1.00-----
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTACAG...........................................................................274.000.003.001.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTAC..........................................................................264.000.003.001.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTCC.........................................................................274.000.003.001.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTAAAG..........................................................................264.000.003.001.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTTCTT......................................................................304.000.002.002.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTACAG........................................................................284.000.004.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTAC..............................................................................243.000.00-3.00---------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTGC....................................................................................173.000.003.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTCGC..........................................................................263.000.002.001.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTAAAG........................................................................283.000.003.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTCTC........................................................................283.000.002.001.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTACAG..........................................................................283.000.001.002.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTAAAG..........................................................................283.000.002.001.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTACAG......................................................................303.000.001.002.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTCCTT.........................................................................272.000.001.001.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTGTAG..........................................................................262.000.002.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTCTGG............................................................................242.000.001.001.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTACAG.......................................................................292.000.00-2.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTAC..........................................................................282.000.002.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTAGG.........................................................................272.000.002.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTCTTC.......................................................................292.000.001.001.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTGGG........................................................................282.000.002.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTACAG............................................................................262.000.002.00----------------------
...................................................................................................................................................................................................................TGCAGTGGTGCGATCTCGGCTCACGC.............262.000.002.00----------------------
..................................................................................................................................................................................................................GTGCAGTGGTGCGATCTCGGT...................212.000.00---2.00-------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTCCC........................................................................282.000.002.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTCGAG...........................................................................252.000.002.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTCTGC...........................................................................252.000.002.00----------------------
........................TGGATCCTGGGGACAGCATGTCT...........................................................................................................................................................................................................2312.002.00----2.00------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTCTAC............................................................................242.000.001.001.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTAAC.........................................................................272.000.00-2.00---------------------
......................................................................................................................................................................................................................AGTGGTGCGATCTCGGAAA.................191.000.00--------------------1.00--
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTTCTTT.....................................................................311.000.001.00----------------------
.......................................................................................................................................................GGGCTTTTTTTTTTTTTTTTTTTTTTCTC......................................................................291.000.001.00----------------------
...............................................................................................................................................................................................................................ATCTCGGCTCACTGCAACCTCCACCGGCT291.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTCG...........................................................................251.000.00-1.00---------------------
....................................................................GGCTTGGTCACAGACGT.....................................................................................................................................................................171.000.00--------1.00--------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTCTGG............................................................................251.000.001.00----------------------
........................................................................................................................................................................................AGTCTTGCTTTGTTGCCCAGGGCAG.........................................251.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTC..............................................................................241.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTCAC.............................................................................231.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTTTTA........................................................................301.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTCTTT........................................................................281.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTCCC............................................................................241.000.00-1.00---------------------
..................................................................................................................................................................................AGACGGAGTCTTGCTTTGTTGCCCAGGCAG..........................................301.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTTCTC......................................................................301.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTCTTG..........................................................................261.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTAGTG.............................................................................231.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTAGG..............................................................................221.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTTCTCC.....................................................................311.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTGCGG..........................................................................261.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTCTGG...........................................................................251.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTCTAA.............................................................................251.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTCGGG.......................................................................291.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTCCGG............................................................................241.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTCGC............................................................................241.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTCCCC......................................................................301.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTCTTA........................................................................281.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTCCC.......................................................................291.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTCTAG........................................................................281.000.00-1.00---------------------
...............................................................................................................................................................................................................................ATCTCGGCTCACTGCAACCTCCACCGGC281.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTCAC...........................................................................251.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTAT............................................................................241.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTTCGG......................................................................301.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTCCT........................................................................281.000.001.00----------------------
.................................................................................................................................................................................................................AGTGCAGTGGTGCGATCTCGGCTCACTGGCC..........311.000.001.00----------------------
..................................................................................................................................................TCTTAGGGCTTTTTTTTTAC....................................................................................201.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTCCCC........................................................................281.000.001.00----------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTTTGTTT.........................................................................281.000.00-1.00---------------------
..................................................................................................................................................................................................................................TCGGCTCACTGCAACCTCCACCGGGG261.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTGAT...........................................................................251.000.00-1.00---------------------
...................................................................................................................................................CTTAGGGCTTTTTTTTAACT...................................................................................201.000.00--1.00--------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTCTGA.........................................................................271.000.001.00----------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTTTGGG..........................................................................271.000.001.00----------------------
..................................................................................................................................................................................................................................TCGGCTCACTGCAACCTCCACGCG241.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTGGGT.........................................................................271.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTCGAG............................................................................241.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTCCCC............................................................................241.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTG...........................................................................271.000.00-1.00---------------------
...............................................................................................................................................................................................................................ATCTCGGCTCACTGCAACCTCCACGTAT281.000.00------------1.00----------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTCCGC............................................................................241.000.001.00----------------------
.............................................................................................................................................................................................TGCTTTGTTGCCCAGGCTGGACCAG....................................251.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTACAG.............................................................................251.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTAAAG...........................................................................271.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTCTGC......................................................................301.000.001.00----------------------
............................................................................................................................................................................................TTGCTTTGTTGCCCAGGCTGGAGTGCAGCGAC..............................321.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTTTTTCC......................................................................321.000.001.00----------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTTTTGGAA........................................................................291.000.001.00----------------------
........................................................................................................................................................GGCTTTTTTTTTTTTTTTTTTTTTCGC.......................................................................271.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTTCCC......................................................................301.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTACC.........................................................................271.000.001.00----------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTTTTTTG.........................................................................281.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTGTTT.........................................................................271.000.00-1.00---------------------
..................................................................................................................................................TCTTAGGGCTTTTTTTTTTTTTTTTTC.............................................................................271.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTCTCC..........................................................................261.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTCGAG............................................................................261.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTGCCC...............................................................................211.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTCTCT.......................................................................291.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTAG...............................................................................211.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTAC................................................................................221.000.00-1.00---------------------
............................................................................................................................................................................................TTGCTTTGTTGCCCAGGCTGGACG......................................241.000.001.00----------------------
.............................................................................................................................................................................................................CTGGAGTGCAGTGGTGCGATCTCGGCTCACGA.............321.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTCGAG...........................................................................271.000.00-1.00---------------------
...................................................................................................................CCAACCTGGGAAATACTG.....................................................................................................................181.000.00------1.00----------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTCTGG.........................................................................271.000.001.00----------------------
...........................................................................................................................................................................................................................TGCGATCTCGGCTCACTGCTAAA........231.000.00---------------1.00-------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTTAAG........................................................................301.000.00-1.00---------------------
.....................................................................................................................................................................................................TGCCCAGGCTGGAGTGCAGTGGTGCGAACCC......................311.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTCATG.......................................................................291.000.001.00----------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTTTTTTAAA.......................................................................301.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTCGAG..........................................................................261.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTCC...........................................................................271.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTAAAG................................................................................221.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTCCCC...............................................................................231.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTCGT.........................................................................271.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTGTTC..........................................................................261.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTAAAG.......................................................................291.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTCTCC............................................................................261.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTCCTC.........................................................................271.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTCCGG............................................................................261.000.00-1.00---------------------
...............................................................................................................................................................................TTGAGACGGAGTCTTGCTTTATA....................................................231.000.00-------------------1.00---
....................................................................................................................................................................................................................GCAGTGGTGCGATCTCGGTTCT................221.000.00--------------1.00--------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTCAGC...........................................................................251.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTAGG...........................................................................251.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTTAATG.......................................................................311.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTTC..........................................................................281.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTCG..........................................................................281.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTCGC.......................................................................291.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTAGA.......................................................................291.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTCTTG...........................................................................251.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTCTT..........................................................................261.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTCGAG......................................................................301.000.001.00----------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTGAC............................................................................251.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTCTC.......................................................................291.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTACT................................................................................221.000.001.00----------------------
.......................................................................................................................................................GGGCTTTTTTTTTTTTTTTTTATG...........................................................................241.000.00--1.00--------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTAAAG........................................................................301.000.001.00----------------------
........................................................................................................................................................GGCTTTTTTTTTTTTTTTTTTTTTTGCG......................................................................281.000.001.00----------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTTTTTTCTA.......................................................................301.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTTCGAG.....................................................................311.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTAGC........................................................................281.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTCAC...........................................................................271.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTCCCG.........................................................................271.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTCCCC..........................................................................261.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTTCGC......................................................................301.000.001.00----------------------
.............................................................................................................................................................................................................CTGGAGTGCAGTGGTGCGATCTCGGCAATG...............301.000.00--1.00--------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTACAG..................................................................................201.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTCTTC............................................................................241.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTTTACAG......................................................................321.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTACAG........................................................................301.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTACAC...........................................................................271.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTGTAG..............................................................................221.000.00-1.00---------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTTTTTTTTGGG.....................................................................321.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTTACAG.......................................................................311.000.00-1.00---------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTTTTTTGC........................................................................291.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTAGAG...............................................................................211.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTCTTC..........................................................................261.000.001.00----------------------
....................................................................................................................................................................................................................GCAGTGGTGCGATCTCGGCTAGA...............231.000.00----------------1.00------
..................................................................................................................................................................................................................GTGCAGTGGTGCGATCTCGGA...................211.000.00---------1.00-------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTAAAG......................................................................301.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTCAGG......................................................................301.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTCTGG........................................................................281.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTCGAG.........................................................................271.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTCC..........................................................................281.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTCG........................................................................281.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTCAT........................................................................281.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTACA...........................................................................251.000.001.00----------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTACCC.......................................................................291.000.001.00----------------------
....................................................................................................................................................................................ACGGAGTCTTGCTTTGTTGCCCAGGCTGTAG.......................................311.000.00--1.00--------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTCC.............................................................................251.000.001.00----------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTTTTTTTTTTTTAA.......................................................................311.000.00-1.00---------------------
....................................................................................................................................................TTAGGGCTTTTTTTTTTTACAG................................................................................221.000.00-1.00---------------------
..........................................................................................................................................................................TTTTTTTGAGACGGAGTCTTGCTTTCCCG...................................................291.000.00----------1.00------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTTTTGTA.........................................................................281.000.001.00----------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTTTTTCTT........................................................................291.000.00-1.00---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTTGAG......................................................................3080.250.250.25----------------------
...................................................................................................................................................CTTAGGGCTTTTTTTTTTTTTTTTTTTTT..........................................................................2950.200.200.20----------------------
...................................................................................................................................................CTTAGGGCTTTTTTTTTTTTTTTTTTTT...........................................................................2860.170.17-0.17---------------------
......................................................................................................................................................AGGGCTTTTTTTTTTTTTTTTTTTTTTGAGAC....................................................................3270.140.140.14----------------------

Antisense strand
AGCTCCTTTCAGAGTGACCTGGATTGGATCCTGGGGACAGCATGTCTCAGGTAAATGGACCTGCTGCTGGCTTGGTCACAGACTTCCTGTTGGGCTCCAGGGTGGCCTCTCTTTCCCAACCTGGGAAATAGGGTTACTATAGCATTTCTTAGGGCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTTTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCCACCTC
...............................................................(((.((((...)))))))...(((((....(((....(((((((.((.((((((.....)))))).)))))))))..)))......)))))................................................................................................
...............................................................64................................................................................................................178......................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189782SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189787SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		TAX577739(Rovira)
total RNA. (breast)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR189786SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..............................................................................................................................................................................................GCACTCCAGCCTGGGCAACAAAGC.................................... 2402.002.00---2.00-------------------
..............TGACCTGGATTGGATGGC.......................................................................................................................................................................................................................... 181.000.00--1.00--------------------
................................................................................................................................................................................................................................TCTCGGCTCACTGCAACCTCCACCTCGAA 291.000.00-------1.00---------------
....................................................AAATGGACCTGCTGCTGTT................................................................................................................................................................................... 191.000.00-----1.00-----------------
.......................................................TGGACCTGCTGCTGGCGGC................................................................................................................................................................................ 191.000.00-------------1.00---------
...................................................................................................................................................................................GACGGAGTCTTGCTTTGTTGCCCAGGCTGCC........................................ 311.000.00-1.00---------------------
.....................................................................................................................................................TAGGGCTTTTTTTTTTTTTTTTTTTGT.......................................................................... 271.000.00------------------1.00----
.........................................................................................................................................................................TTTTTTTTGAGACGGAGTCTTGCTTTGTTAG.................................................. 311.000.00----------------------1.00
............................................................................................................................................................................................................GCTGGAGTGCAGTGGTGCGATCTCGGCTACCC.............. 321.000.001.00----------------------
................................................................................................................................................................................................................GAGTGCAGTGGTGCGATCTCGGCTCACTGAACT......... 331.000.00-----------1.00-----------
...........................................................................................................................................................................................................................TGGAGGTTGCAGTGAGCCGAGATCGCA.... 2701.001.00---------------------1.00-
......................................................CAGCAGCAGGTCCAT..................................................................................................................................................................................... 1580.120.12-----0.12-----------------