| (3) B-CELL | (1) BRAIN | (4) BREAST | (14) CELL-LINE | (3) CERVIX | (1) LIVER | (1) OTHER | (1) RRP40.ip | (1) SKIN | (1) TESTES | (1) UTERUS |
| AAACTACCCCCACCCCAAAATCTGTGGAAAAATTGTCTTCCATGCGACAGGTCACTGGTGCTGAAAAGGTTGGGGACCGCTGTTCTGCAGGAAACGAGAGACAGAGGGAATGGGAGTGCAGTGGTGGAGCCACACCCAAGGAGAGGTGGCTGTGGGGCTGGGCCTGGGAGACTCCTACCTTACCCCCTGTCCCTGCCCAGGCGTTGGCTATGCTGTCATCCTGATCGCCCTGTACGTTGGCTTCTACTAC ................................................................................................................((.((.((((..((.((((((.((...))....)))))).))..)))).))))..................................................................................... ............................................................................................93.......................................................................166.................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR040040(GSM532925) G612N. (cervix) | SRR015359(GSM380324) Germinal Center B cell (GC136). (B cell) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR040028(GSM532913) G026N. (cervix) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR060985(GSM569189) Human naive B cell [09-001]. (cell line) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189782 | SRR444067(SRX128915) Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line) | SRR191494(GSM715604) 157genomic small RNA (size selected RNA from . (breast) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR040039(GSM532924) G531T. (cervix) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577589(Rovira) total RNA. (breast) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................AGGTGGCTGTGGGGCAAAC........................................................................................ | 19 | 30.00 | 0.00 | 28.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .................................................................................................GAGACAGAGGGAATGGGGCAA.................................................................................................................................... | 21 | 5.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................AGACAGAGGGAATGGGGCAA.................................................................................................................................... | 20 | 4.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..................................................................................................................................................TGGCTGTGGGGCTGGGCG...................................................................................... | 18 | 3.00 | 0.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................GAGACAGAGGGAATGGGGCTT.................................................................................................................................... | 21 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................GAGACAGAGGGAATGGGC....................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................AGGTGGCTGTGGGGCAACC........................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................GGAGAGGTGGCTGTGTGTT............................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .............................................................................................................................................AGAGGTGGCTGTGGGCTT........................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TGCTGAAAAGGTTGGGGACCGCTGTTCTG................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................TGTTCTGCAGGAAACGAGAGACAGAGGGA............................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................AAGGTTGGGGACCGCTGGAGT.................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................AGGTTGGGGACCGCTCAC...................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................GAGACAGAGGGAATGGGAATTT................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................TGGGGACCGCTGTTCTGCAGGAAACGAGA....................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................AAGGAGAGGTGGCTGTTT............................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................AGGTGGCTGTGGGGCCAAC........................................................................................ | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................GGAGAGGTGGCTGTGTGG............................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ......................................................................................................................................................TGTGGGGCTGGGCCTCAGA................................................................................. | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................GAGAGGTGGCTGTGG............................................................................................... | 15 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................GCTGTGGGGCTGGGC....................................................................................... | 15 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................GACAGAGGGAATGGGGCAA.................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................GTCCCTGCCCAGGCGCCA............................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................CCCAAGGAGAGGTGGC.................................................................................................... | 16 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 |
| ................................................AGGTCACTGGTGCTGA.......................................................................................................................................................................................... | 16 | 6 | 0.17 | 0.17 | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AAACTACCCCCACCCCAAAATCTGTGGAAAAATTGTCTTCCATGCGACAGGTCACTGGTGCTGAAAAGGTTGGGGACCGCTGTTCTGCAGGAAACGAGAGACAGAGGGAATGGGAGTGCAGTGGTGGAGCCACACCCAAGGAGAGGTGGCTGTGGGGCTGGGCCTGGGAGACTCCTACCTTACCCCCTGTCCCTGCCCAGGCGTTGGCTATGCTGTCATCCTGATCGCCCTGTACGTTGGCTTCTACTAC ................................................................................................................((.((.((((..((.((((((.((...))....)))))).))..)))).))))..................................................................................... ............................................................................................93.......................................................................166.................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR060983(GSM569187) Human pre-germinal center B cell [09-001]. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR553576(SRX182782) source: Testis. (testes) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR040040(GSM532925) G612N. (cervix) | SRR015359(GSM380324) Germinal Center B cell (GC136). (B cell) | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR040028(GSM532913) G026N. (cervix) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR060985(GSM569189) Human naive B cell [09-001]. (cell line) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR189782 | SRR444067(SRX128915) Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line) | SRR191494(GSM715604) 157genomic small RNA (size selected RNA from . (breast) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR094132(GSM651908) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR040039(GSM532924) G531T. (cervix) | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577589(Rovira) total RNA. (breast) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR060981(GSM569185) Human centroblast [09-001]. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................CCCTGCCCAGGCGTTCG........................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .............................................................................................................................................................CTGGGCCTGGGAGACTT............................................................................ | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................AGGTCACTGGTGCTGTGC........................................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ..............................................................GAAAAGGTTGGGGACCCTCC........................................................................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................AGTGGTGGAGCCACAAAG................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ...............................................................................................................................................................................................................CTATGCTGTCATCCTTT.......................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |