ID: uc002egp.17
GENE: CYLD(18)
chr16:50830035-50830284+


(3)
AGO1.ip
(1)
AGO2.ip
(2)
AGO3.ip
(17)
B-CELL
(14)
BRAIN
(17)
BREAST
(27)
CELL-LINE
(3)
CERVIX
(1)
FIBROBLAST
(8)
HEART
(3)
HELA
(1)
KIDNEY
(9)
LIVER
(3)
OTHER
(53)
SKIN
(4)
UTERUS
(1)
XRN.ip

Sense strand
TGGCCCCAGAATCCTTTCAGAAACCAAGAAATGAGAATATGTCAAGGGTTAAAGGAGGCTTTCACTTCCAGAAATCAGAAGTAAAATAAAGGCTTTTAGAGCCTGAAATTAGCTTTTTGGAAATGATAGGATTATAAAATCACTGGCAAAAGGGTTTAGAACTTGACTGCCCTATAAAGAGTTCTTCCTCTGTGCCATAGGTGGTCAGAATGGCTTCAACATTCCTCAAGTCACCCCATGCCCAGAAGTA
...............................................................................................................................................(((((...(((...(((((((..............))))))).)))...))))).....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
TAX577740(Rovira)
total RNA. (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
TAX577580(Rovira)
total RNA. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR191506(GSM715616)
146genomic small RNA (size selected RNA from . (breast)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR191515(GSM715625)
4genomic small RNA (size selected RNA from to. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR189783SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR038858(GSM458541)
MEL202. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTT......................................................................................231161.00161.0017.002.00-1.001.006.002.004.001.002.005.004.004.001.003.002.00-2.003.003.003.00--2.003.004.00-1.003.00-2.00--3.001.003.00-1.003.00-2.003.003.003.002.001.001.001.00--1.002.002.00-1.001.001.00---2.001.002.00--1.001.002.002.003.00---------1.001.001.00-1.00-1.00--2.00-1.00-2.001.001.00---1.00-1.00-1.00----1.00----1.001.00--1.00-1.00------1.00------1.00-1.00---1.00-----1.001.001.00----1.00-1.001.001.00------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACT.......................................................................................221123.00123.00-6.00-4.004.003.005.002.002.00-1.001.00-1.003.002.00-2.003.003.00-2.003.003.00--1.00-1.004.00--2.001.003.00-4.00--3.002.001.001.00--2.001.001.00-------1.002.003.00-2.001.001.00---1.00-1.00----2.00--1.00-1.00--1.00---1.001.002.001.00------1.002.00-1.00-1.00-1.00----1.00--1.00-------1.00----1.00-1.00---1.00-1.001.00---1.001.00--1.00--1.001.00---1.00--------1.001.001.00-1.00-
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACT.......................................................................................23136.0036.00--6.00---1.00--2.00--1.001.00-1.00----1.001.001.00----1.00----1.00----1.00----------------1.001.00---1.00--1.00---1.00----2.00-----1.00---1.00-1.00------------2.00-1.00--1.00---1.00--1.00----------1.00---------1.00--------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAAC........................................................................................21126.0026.00-1.00-5.005.00--1.001.00------------1.00-------------------------1.00--1.00------------------------1.00------1.00----1.00--1.001.00-1.00---1.00------------1.00---1.00---------------------------------1.00-------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTT......................................................................................24117.0017.001.00------1.00-1.00---1.00---2.00---1.00---1.001.00---1.00-------------1.00-----1.00----------1.00-------------------------------------------------------------1.00---------1.00---1.00--------------1.00---------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAAC........................................................................................22112.0012.00---------1.00---1.00-1.00----1.00-----2.002.00-------1.00-----------------------------1.00--1.00------------------------------------------------------------------------1.00--------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAG...........................................................................................18111.0011.00----------------4.00--------------2.00----------------1.002.00--------------------1.00-------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAA.........................................................................................20111.0011.00--------------------------------------1.00--------------3.00----2.00----3.00------1.00-------------------------------------------------------------------------------1.00-----------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGA..........................................................................................1919.009.00-2.00-----------------------------------2.00----------2.00---------------1.00---------2.00---------------------------------------------------------------------------------------
...........................................................................................................................................TCACTGGCAAAAGGGTTTAGAACT.......................................................................................2418.008.004.00----------1.00--------------1.00---1.00---------------------------------------------------------------------1.00-------------------------------------------------------------
..................................................................................................................................................CAAAAGGGTTTAGAACT.......................................................................................1715.005.00--5.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTA............................................................................................1714.004.00----------------1.00-----------------------------------------------------------1.00-1.00------------------------------------------------1.00----------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGA..........................................................................................2014.004.00-------------------------------1.00--------------------------------------------1.00-----1.00-------------------------------------------1.00-----------------------------------
..............................................................................................................................................CTGGCAAAAGGGTTTAGAACTT......................................................................................2214.004.00--------1.00------------------1.00---------------------------------------------------1.00-----------------------1.00----------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAAA........................................................................................2112.0011.00------1.00-----------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTTT.....................................................................................2412.00161.00------------1.00-------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CTTCAACATTCCTCAAGTCACCCCAT...........2612.002.00-------------------------------------------------------------------------2.00----------------------------------------------------------------------------------------
...........................................................................................................................................TCACTGGCAAAAGGGTTTAGAACTT......................................................................................2512.002.00------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------1.00--
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTG.....................................................................................2211.001.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................AAGTCACCCCATGCCCAGAAGTA2311.001.00----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTTT.....................................................................................2511.0017.00-------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
...................................................................................................................................................................................................CATAGGTGGTCAGAAGATA....................................191.000.00-------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTT......................................................................................2111.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................TAAAGAGTTCTTCCTTTC..........................................................181.000.00--------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTGA....................................................................................2311.001.00----------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
.....................................TATGTCAAGGGTTAAAGGAGG................................................................................................................................................................................................2111.001.00------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAA.........................................................................................2111.001.00-------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACA.......................................................................................2311.0012.00---------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTGACTG.................................................................................2611.001.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................AGTTCTTCCTCTGTGCCTCTG..................................................211.000.00-----------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
............................................AGGGTTAAAGGAGGCTTTCACTTCCA....................................................................................................................................................................................2611.001.00----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................GTCACCCCATGCCCACCA...181.000.00--------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTTA.....................................................................................2511.0017.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................GGTTTAGAACTTGACCTA................................................................................181.000.00-----------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
.....................................................................................................................................................................................TTCTTCCTCTGTGCCATAGT.................................................201.000.00---------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTTG.....................................................................................2411.001.00---------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
..............................................................................................................................................CTGGCAAAAGGGTTTAGTAGC.......................................................................................211.000.00----------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAG...........................................................................................1911.001.00-------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------
...................................................................................................................TTTGGAAATGATAGGATGC....................................................................................................................191.000.00----------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACG.......................................................................................2311.0012.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
...........................................................................CAGAAGTAAAATAAAATCA............................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACTA......................................................................................2311.00123.00----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTAGAACTTAT....................................................................................2611.0017.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................CACTGGCAAAAGGGTTTA............................................................................................1811.001.00-------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................TCACTGGCAAAAGGGTTTA............................................................................................1911.001.00----------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TGGCAAAAGGGTTTAGAACTTGACTGC................................................................................2711.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------1.00------------
.............................................................................................................................................ACTGGCAAAAGGGTTTAGAACAAAC....................................................................................2511.0026.00----------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
............................AAATGAGAATATGTCAAG............................................................................................................................................................................................................1820.500.50------------------------------------------------------------------------------------------------------0.50-----------------------------------------------------------
....................................................................................................................................................AAAGGGTTTAGAACTT......................................................................................1640.250.25-----0.25------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................AAAGGGTTTAGAACT.......................................................................................1580.120.12-----0.12------------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
TGGCCCCAGAATCCTTTCAGAAACCAAGAAATGAGAATATGTCAAGGGTTAAAGGAGGCTTTCACTTCCAGAAATCAGAAGTAAAATAAAGGCTTTTAGAGCCTGAAATTAGCTTTTTGGAAATGATAGGATTATAAAATCACTGGCAAAAGGGTTTAGAACTTGACTGCCCTATAAAGAGTTCTTCCTCTGTGCCATAGGTGGTCAGAATGGCTTCAACATTCCTCAAGTCACCCCATGCCCAGAAGTA
...............................................................................................................................................(((((...(((...(((((((..............))))))).)))...))))).....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
TAX577740(Rovira)
total RNA. (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
TAX577580(Rovira)
total RNA. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR191506(GSM715616)
146genomic small RNA (size selected RNA from . (breast)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR191515(GSM715625)
4genomic small RNA (size selected RNA from to. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR189783SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR038858(GSM458541)
MEL202. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
........................................................GGCTTTCACTTCCAGAAG................................................................................................................................................................................ 181.000.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
...................TTCTCATTTCTTGGTTTC..................................................................................................................................................................................................................... 1820.500.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------0.50
...................................................................................................................................................................................TGGCACAGAGGAAGAACT..................................................... 1880.250.25----------------------------0.12--------------0.12----------------------------------------------------------------------------------------------------------------------