ID: uc002ebn.1_intron_4_0_chr16_31232240_f.3p
GENE: (5)
chr16:31233948-31234197+


(4)
B-CELL
(3)
BRAIN
(2)
BREAST
(7)
CELL-LINE
(1)
CERVIX
(1)
FIBROBLAST
(6)
LIVER
(5)
OTHER
(10)
SKIN

Sense strand
CATTTAAATTCAGTGGTGCTAAGTACATTCACATTGTACAACCATCACCAGTGTTTATCTCCAGAATTTTCTCATCTTCCCAAACCAAAACTCCAAAGGAAGAGTTTTAAGCAGGGGTGCGATGTGGGGAGATCCTGGAATCCCCCCAGCCCTTGTCCTCCCCCCTCACACATGCCTCCCCTTCCCCTCCCCACCCCCAGGCTGCAGAAGATCCTGGCAGAGTCTCCCCCACCCGCCCGTCTGGACATCC
................................................................................................................(((((.((.((((((((((((.((((.......)))).....))).)))))......))))))..)))))....................................................................
..............................................................................................................111......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343334SRR343336SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR343335SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR189782SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
...................................................................................................................GGTGCGATGTGGGGACGG.....................................................................................................................18130.002.007.005.007.003.002.001.00--1.002.00-----1.00------------1.00----------
...................................................................................................................GGTGCGATGTGGGGACGGA....................................................................................................................19130.002.009.004.003.002.003.004.00--1.00--1.00---------1.001.00-----------1.00----
...................................................................................................................GGTGCGATGTGGGGACG......................................................................................................................17110.002.004.00-1.003.002.00----------------------------------
...................................................................................................................GGTGCGATGTGGGGAC.......................................................................................................................1616.002.002.002.001.001.00-----------------------------------
........................................................................................................................................................................................CCCTCCCCACCCCCAGG.................................................1703.003.00------3.00--------------------------------
...................................................................................................................GGTGCGATGTGGGGA........................................................................................................................1512.002.001.001.00-------------------------------------
..................................................................................................................................................................................................................ATCCTGGCAGAGTCTCTC......................181.000.00---------------------------1.00-----------
....................................................................................................................GTGCGATGTGGGGAGGGC....................................................................................................................181.000.00------------1.00--------------------------
.......................................................................................................................................................CTTGTCCTCCCCCCTCCCCA...............................................................................201.000.00-----------------------1.00---------------
..............................................................................................................................................................................................................................TCTCCCCCACCCGCCATCA.........191.000.00--------------1.00------------------------
........................................................................................................................................................................................CCCTCCCCACCCCCAGGCTGT.............................................211.000.00--------------------------------1.00------
........TTCAGTGGTGCTAAGTACCG..............................................................................................................................................................................................................................201.000.00-------1.00-------------------------------
...................................................................................................................................................................................................CCCAGGCTGCAGAAGAATA....................................191.000.00----------1.00----------------------------
....................................................................................................................GTGCGATGTGGGGAGGGA....................................................................................................................181.000.00---------------------------------1.00-----
............................................................................................................................................................CCTCCCCCCTCACACAAGG...........................................................................191.000.00-------1.00-------------------------------
...................................................................................................................................................................................................................................CCCACCCGCCCGTCTT.......161.000.00------------------------------1.00--------
..............................................................................................................................................................................CCTCCCCTTCCCCTCCCCGGCC......................................................221.000.00-----------------1.00---------------------
........................................................................................................TTTTAAGCAGGGGTGTCAG...............................................................................................................................191.000.00-------------------------------1.00-------
....................................................................................................................GTGCGATGTGGGGAGGAA....................................................................................................................181.000.00------------------1.00--------------------
..............................................................................................................................................................................CCTCCCCTTCCCCTCCCCCTGC......................................................221.000.00--------------------------1.00------------
............................................................................................................................................................CCTCCCCCCTCACACATGA...........................................................................191.000.00-1.00-------------------------------------
....................................................................................................................................................................................................................................CCACCCGCCCGTCTG.......1540.250.25------------------------------------0.25--

Antisense strand
CATTTAAATTCAGTGGTGCTAAGTACATTCACATTGTACAACCATCACCAGTGTTTATCTCCAGAATTTTCTCATCTTCCCAAACCAAAACTCCAAAGGAAGAGTTTTAAGCAGGGGTGCGATGTGGGGAGATCCTGGAATCCCCCCAGCCCTTGTCCTCCCCCCTCACACATGCCTCCCCTTCCCCTCCCCACCCCCAGGCTGCAGAAGATCCTGGCAGAGTCTCCCCCACCCGCCCGTCTGGACATCC
................................................................................................................(((((.((.((((((((((((.((((.......)))).....))).)))))......))))))..)))))....................................................................
..............................................................................................................111......................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343334SRR343336SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR343335SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR189782SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................AATTTTCTCATCTTCCCATT...................................................................................................................................................................... 202.000.00--------------------1.00--------1.00---------
........................................................................................................................................................................................CCCTCCCCACCCCCAGGTGGG............................................. 2101.000.00-------------------1.00-------------------
........................................................................................................................................................................................CCCTCCCCACCCCCAGGCTAGC............................................ 221.000.00------------------------1.00--------------
...........................................................................................................................................................TCCTCCCCCCTCACAGTTT............................................................................ 191.000.00-----------------------------------1.00---
.........................................................................................................................................................................................................................CAGAGTCTCCCCCACGC................ 171.000.00-------------------------1.00-------------
......AATTCAGTGGTGCTACTG.................................................................................................................................................................................................................................. 181.000.00-------1.00-------------------------------
................................................................................................................................................................................................................................TCCCCCACCCGCCCGCAG........ 181.000.00----------------1.00----------------------
......................................................................................................................................................CCTTGTCCTCCCCCCTGTT................................................................................. 191.000.00-------------1.00-------------------------
................................................................GTTTGGGAAGATGAGAAAATT..................................................................................................................................................................... 2150.200.20----------0.20----------------------------
..............................................................................................................................................................................GGGTGGGGAGGGGAAGGGGAGG...................................................... 2250.200.20-------------------------------------0.20-
...............................................................GGGAAGATGAGAAAATTC......................................................................................................................................................................... 1880.120.12-----------0.12---------------------------
................................................................................................................................................................................GGGTGGGGAGGGGAAGGGGA...................................................... 2080.120.12--------------------------------------0.12