ID: uc002dzz.8
GENE: FBXL19(9)
chr16:30957851-30958100+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(3)
AGO2.ip 		(2)
AGO3.ip 		(3)
B-CELL 		(5)
BRAIN 		(13)
BREAST 		(41)
CELL-LINE 		(4)
CERVIX 		(5)
HEART 		(4)
HELA 		(4)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(16)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
ATCATGGAAGGCCTCCGAGGAGGTGATGTGAGGAGTGGACAGATGAGGTCAGGCCATGAGGGTGTTTTTGAGAAGAGCAAGCCACAGAGTGCACCAGGTCACTCACTTATGTGGGAAGCAGGTGGAGGGCAGATGGTCTGGATACCTGGGCGCAGGGATGGGAGTGGCCAGGAGTGCTGACCTCTCATCTGGCTGCCCAGGGCAAACAGAGAGCCGTGGTCGGCTGCAGGGGGTGGCAGAACTGCGTCTG
................................................................................................................................................(((((((((..((((((((..((.(((.....))).)))))))))).)).))))))).................................................
.........................................................................................................................................138.................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037938(GSM510476)
293Red. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR343334DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM359209(GSM359209)
hepg2_biotin_el_hl_a. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR191544(GSM715654)
126genomic small RNA (size selected RNA from . (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040038(GSM532923)
G531N. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		TAX577739(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCATTT................................................2214.000.0012.00--1.00-------------------------------------------------------------------------------1.00-----------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAG......................................................................................22110.0010.005.00----1.00--1.00----------------1.00-------------------------------------------------------------------1.001.00------------
...................................................................................................................................................................................ACCTCTCATCTGGCTGCCCAGT.................................................229.000.00---1.00------1.00----------1.00----1.00-1.00-------1.00----------------1.00------------------------------------1.001.00---------------
...................................................................................................................................................................................ACCTCTCATCTGGCTGCCCAGA.................................................228.000.00-------------1.00-------------2.00--2.00---------------1.00-------------------1.00---------------------1.00------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAG......................................................................................2118.008.00--3.001.00------------------------------1.00-----------------------------1.00-----------1.00--1.00---------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAGA.....................................................................................2317.0010.002.00----1.00---1.00--------2.00-----1.00----------------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGG........................................................................................2017.007.00-6.00---------------------------------------------------------------------------------------------------1.00-----
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGACT...............................................236.000.002.00-------------------------------------1.001.00-----------------------------------1.00--------------------------1.00----
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGT.....................................................................................2216.006.002.00---1.00----1.00-2.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCATT.................................................215.000.001.00--1.00---------1.00---------------------2.00-----------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCC.................................................................................2514.004.00--2.00----------------------------1.00-1.00-------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGC..................................................................................2413.003.00-----1.00----1.00---------------------------------1.00--------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGGCC.................................................................................2613.003.00-----------------------------------------------------------------1.00----1.00----------1.00-------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGG...................................................................................2313.003.00----2.00-----------------------------------------------------------------------------1.00------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGT.....................................................................................2113.003.00------1.00--------------------------------------------------------------1.00--------------1.00----------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGA.......................................................................................2013.003.00----------1.00------------------1.00---------------1.00-------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTA....................................................................................2313.006.00------------2.00------------------------------------------------1.00---------------------------------------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTGG...................................................................................2113.003.00------1.00-------1.00--------1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGA.................................................213.000.001.00--------------------------------------------------1.00-----------------------------------1.00-------------------
.............................................................................................................TGTGGGAAGCAGGTGGAGGGCAGACGG..................................................................................................................272.000.00-------2.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTGGC..................................................................................2212.002.00--------2.00--------------------------------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAGT.....................................................................................2312.002.001.00-----------------------1.00----------------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGA.......................................................................................2112.002.00----------------------------------------------------------1.00--------------------------1.00---------------------
................................................................................................................................................CCTGGGCGCAGGGATGG.........................................................................................1712.002.00-----------------------------------------1.00------------------1.00----------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAA......................................................................................2212.002.00-----------------------------------------------------------1.00--1.00--------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGCCT................................................................................2512.002.00-----1.00-------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGTAA.................................................................................252.000.00--2.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGCTAT...............................................................................2612.001.00---------------2.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGTTT...............................................232.000.00------------------------------------1.001.00---------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGCC.................................................................................2412.002.00-----1.00---------1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGAAA...............................................232.000.00-----1.00---1.00-------------------------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGG...................................................................................2412.002.00-------------1.00-------------------1.00-------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAAA.....................................................................................202.000.00--------------2.00--------------------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTAT...................................................................................2412.006.00------1.00-------------------------------------------------1.00--------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGT........................................................................................1912.002.00-2.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGG.........................................................................................1812.002.00--------------------2.00--------------------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGA..................................................................................2412.003.00----------------------2.00------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGA...................................................................................2212.001.00------1.00-------------------------1.00--------------------------------------------------------------------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTG....................................................................................2011.001.00--------------------------------------------------------------------------------1.00--------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGA.......................................................................................1911.001.00----1.00------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGAA................................................221.000.00---------------------------------------------------------------1.00-------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGA.....................................................................................2111.001.00---------------------------------------------------------------------------------------------------1.00-------
...........................................................................................................TATGTGGGAAGCAGGTGGAGGGCAG......................................................................................................................2511.001.00--------------------------1.00--------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GCAGGGGGTGGCAGAACT.......1811.001.00------------------------------------------------------------------------1.00----------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCATTA................................................221.000.00-----------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTGGCCAC...............................................................................251.000.00----------------1.00------------------------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAAA.....................................................................................2311.002.00-------------------------------------------1.00---------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAC......................................................................................2211.002.00-------------------------1.00---------------------------------------------------------------------------------
...................................................................................................................................................................................ACCTCTCATCTGGCTGCCCAGTT................................................231.000.00------------------------------------------1.00----------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGGCCT................................................................................2711.003.00--1.00--------------------------------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGATAG....................................................................................2311.003.00-----------------------------1.00-----------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGTA..................................................................................2511.001.00-------------------------------------------------------------------------------------------------1.00---------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCAA................................................................................2611.003.00--------------------------------1.00--------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCA.................................................................................2511.003.00----1.00------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCTCATCTGGCTGCCCAGAAGA..............................................221.000.00------------------------------------------------1.00----------------------------------------------------------
.....................................................................................................................................................................................................................CCGTGGTCGGCTGCAGGGGGG................211.000.00---------------------------------------------------------1.00-------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAT..................................................201.000.00----------------------------1.00------------------------------------------------------------------------------
......................................................................................................................................................................................TCTCATCTGGCTGCCCAGTTCT..............................................221.000.00------------------------------------------------------1.00----------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTAA...................................................................................2411.006.00-----------------1.00-----------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGCCCTTC.............................................................................2811.002.00----------------1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGGCAAACAGAGAGATA..................................181.000.00-----------------------------------------------------------------------1.00-----------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGGGA.....................................................................................2311.007.00------------------1.00----------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTG....................................................................................2111.001.00-----------------------------------------------------------------------------1.00-----------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGG.........................................................................................1911.001.00-------------------------------------1.00---------------------------------------------------------------------
.............................................................................................................TGTGGGAAGCAGGTGGAGAGG........................................................................................................................211.000.00-------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTAAT..................................................................................2511.006.00-----------------1.00-----------------------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCCTTTT.............................................................................2911.004.00---1.00-------------------------------------------------------------------------------------------------------
........................................AGATGAGGTCAGGCCATGAGGGCGT.........................................................................................................................................................................................251.000.00-------1.00---------------------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGT.....................................................................................2011.001.00--------------------------------------------------------------------1.00--------------------------------------
................................................................................................................GGGAAGCAGGTGGAGTTA........................................................................................................................181.000.00-----------------------------------------------------------------------------------------------1.00-----------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTG....................................................................................2311.001.00-------------------------------------------------------------------------1.00---------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAAAG....................................................................................2411.002.00----1.00------------------------------------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGG........................................................................................1811.001.00----------------------------------------------------------------------------------------------------1.00------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGGC..................................................................................2511.001.00------------1.00----------------------------------------------------------------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGGCCAGGAGTG..........................................................................3311.001.00----------------------------------------------------1.00------------------------------------------------------
....................................................................................................................................ATGGTCTGGATACCTGGGCGCAGGGACGGG........................................................................................301.000.00-------1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGT.................................................211.000.00--------------------------------------------------------------------------------------1.00--------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCCA................................................................................2611.001.00---------1.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGGCAAACAGAGAGCCG..................................1811.001.00-----------------1.00-----------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAG......................................................................................1911.001.00----------1.00------------------------------------------------------------------------------------------------
................................................................TTTTTGAGAAGAGCAAGCCACAG...................................................................................................................................................................2311.001.00--------------------------------------------------------------------------------------------1.00--------------
....................................................................................................................................................................................................CCAGGGCAAACAGAGAGCCG..................................2011.001.00-------------------------------------------------------1.00---------------------------------------------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTGGCC.................................................................................2311.001.00-----------------------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................TGGGCGCAGGGATGGGAGTGGCCT................................................................................2411.001.00------------------------------------------------------------------------------------------------1.00----------
................................................................................................................................................CCTGGGCGCAGGGATGGGAG......................................................................................2011.001.00------1.00----------------------------------------------------------------------------------------------------
................GAGGAGGTGATGTGAGTGG.......................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------1.00--------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGC..................................................................................2311.001.00-----------------------------------------------------------------------------------------1.00-----------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAAGA................................................221.000.00--------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................GTCTGGATACCTGGGCG..................................................................................................1711.001.00-----------1.00-----------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAGAGA...............................................231.000.00------1.00----------------------------------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGGCAT................................................................................2511.001.00---1.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAT......................................................................................2211.002.00-------------------------------------------------------------------1.00---------------------------------------
...............................................................................................................................................ACCTGGGCGCAGGGATGGGAGTGGT..................................................................................2511.002.00-------------------------------1.00---------------------------------------------------------------------------
.................................................................................................................................................CTGGGCGCAGGGATGGGAGTGG...................................................................................2211.001.00-----------------------------------------------1.00-----------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAGAC....................................................................................2411.0010.00----------------1.00------------------------------------------------------------------------------------------
................................................................................................................................................CCTGGGCGCAGGGATGGGAGTGGCT.................................................................................2511.003.00----------------------------------1.00------------------------------------------------------------------------
....................................................................................................................................................................................CCTCTCATCTGGCTGCCCAAAT................................................221.000.00---------------------1.00-------------------------------------------------------------------------------------
..............................................................................................................................................TACCTGGGCGCAGGGATGGGAGTG....................................................................................2411.001.00--------------------------------------------------------------------------------------------------1.00--------
............................................................................................................................................................................................................AACAGAGAGCCGTGG...............................1530.670.67-------0.33-------------------------------------------------------------------------------------------------0.33-
..................................................................................................................................................................................................................................CAGGGGGTGGCAGAACT.......1720.500.50--------------------------------------------------------------------------------------------------------0.50--
........................................................................................................................................TCTGGATACCTGGGCGC.................................................................................................1720.500.50-------------------------------------------------------------------------------------------------------0.50---
....................................................................................................................................................................................................................................GGGGGTGGCAGAACT.......1550.200.20---------------------------------------0.20-------------------------------------------------------------------
.................................................................................................................GGAAGCAGGTGGAGGGC........................................................................................................................1750.200.20--------------------------------------0.20--------------------------------------------------------------------
.......................................................................................................................AGGTGGAGGGCAGATG...................................................................................................................1650.200.20----------------------------------------------------------------------------------------------------------0.20

Antisense strand
ATCATGGAAGGCCTCCGAGGAGGTGATGTGAGGAGTGGACAGATGAGGTCAGGCCATGAGGGTGTTTTTGAGAAGAGCAAGCCACAGAGTGCACCAGGTCACTCACTTATGTGGGAAGCAGGTGGAGGGCAGATGGTCTGGATACCTGGGCGCAGGGATGGGAGTGGCCAGGAGTGCTGACCTCTCATCTGGCTGCCCAGGGCAAACAGAGAGCCGTGGTCGGCTGCAGGGGGTGGCAGAACTGCGTCTG
................................................................................................................................................(((((((((..((((((((..((.(((.....))).)))))))))).)).))))))).................................................
.........................................................................................................................................138.................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037938(GSM510476)
293Red. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR343334DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM359209(GSM359209)
hepg2_biotin_el_hl_a. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR191544(GSM715654)
126genomic small RNA (size selected RNA from . (breast)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040038(GSM532923)
G531N. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		TAX577739(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................TCCACTCCTCACATCACC................................................................................................................................................................................................................... 1812.002.00----------------------------------------1.00-------------------------------------1.00----------------------------
..........................................................................................................................................TCCCTGCGCCCAGGTATCCA............................................................................................ 2011.001.00---1.00-------------------------------------------------------------------------------------------------------
.....................TCTGTCCACTCCTCACATCACC............................................................................................................................................................................................................... 2211.001.00--------------------------------------------------1.00--------------------------------------------------------
................................................................TTTTTGAGAAGAGCAGAG........................................................................................................................................................................ 181.000.00-------------------1.00---------------------------------------------------------------------------------------