uc002dup.3_intron_0_0_chr16_29883050

GCCCCATCACCGTGGAGTCGGACTTCAGCAACCCGCTGTATGAAGCTGGGGTAAGCACCTTGCCTGCCCCTGAAGAGCCACCACTTGGCTCTCCCAGGACTCCATAACCTTCTCGCAAGGTCTCTGGAATCTCTGTCTTGGGAATTTCAAACTCAGCTGCCCCCAGAGGCCATGTCAATGAGCATAGCAAGCCATGTGTATACAATAGGGAGTGGTGAGGACTGTGGCTAAGTGGAGGACTTGTGCCCCATCTCAAGAATACGGCTCTACCCCATAGTCGAAACTGAGGCACAATTGGCAGATCTTCCAATTATTCAAGACAAGCCAGAAATTCAGATTTTTGTGTCATTTTACGACACCGTAGGATGAACCAAACACATTCACTGGCCCCCCAGCCCCTAGAGGTCAATGTTACTTTAAAACCCAGGATCGTTGCCCCTCCTCCCATTCGGCTGCCTCTTCCACCCCTATCAGACTCCAACAACTGACCTGATCTCTCTGTCTTCAGGATACGCGGGAGTATGAAGTTTCCATCTGAACCCCAAGACTACAGCTGCA
..................................................(((.((.....)).)))...((((((((((.....))))))(((((((((((((..(((((.....)))))...))))......)))))))))..)))).........................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150......................................................................................................................................................................................................................................................................................................................................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR037937(GSM510475)
293cand2. (cell line)

SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)

SRR207110(GSM721072)
Nuclear RNA. (cell line)

SRR029124(GSM416753)
HeLa. (hela)

SRR189782

SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)

SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

SRR189784

SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)

DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR189787

SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)

GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)

SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)

TAX577739(Rovira)
total RNA. (breast)

SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)

SRR553576(SRX182782)
source: Testis. (testes)

TAX577579(Rovira)
total RNA. (breast)

SRR189786

SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)

SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)

SRR040043(GSM532928)
G428T. (cervix)

SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)

SRR037936(GSM510474)
293cand1. (cell line)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR037931(GSM510469)
293GFP. (cell line)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)

SRR029131(GSM416760)
MCF7. (cell line)

SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)

DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR029127(GSM416756)
A549. (cell line)

SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)

SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)

SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)

SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)

SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)

SRR029129(GSM416758)
SW480. (cell line)

SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)

GSM416733(GSM416733)
HEK293. (cell line)

SRR029128(GSM416757)
H520. (cell line)

SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)

SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)

SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)

SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

GSM532886(GSM532886)
G850T. (cervix)

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)

SRR037933(GSM510471)
293cand4_rep2. (cell line)

TAX577743(Rovira)
total RNA. (breast)

SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)

SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)

SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR040036(GSM532921)
G243N. (cervix)

DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)

SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)

..................................................GTAAGCACCTTGCCTCCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

26.80

1.00

12.40

2.80

3.40

1.60

0.20

0.60

1.00

0.20

0.40

0.20

0.60

0.20

0.40

0.20

..................................................GTAAGCACCTTGCCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

6.67

1.00

1.33

0.33

0.67

0.33

..................................................GTAAGCACCTTGCCTCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

6.60

1.00

2.00

1.60

0.60

1.00

0.20

0.80

0.20

..................................................GTAAGCACCTTGCCTGCGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

4.67

6.67

1.00

0.67

0.33

0.67

0.33

.....ATCACCGTGGAGTCGGACGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

4.00

0.00

4.00

..................................................GTAAGCACCTTGCCTGCGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

2.33

6.67

2.00

0.33

.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTCCATCTGAACTCTG..............

2.00

0.00

2.00

1.00

......................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGGATCGTTGCCCCTCCTCC.................................................................................................................

2.00

1.00

..................................................GTAAGCACCTTGCCTGCGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

2.00

6.67

0.67

0.33

..................................................GTAAGCACCTTGCCTGCGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

2.00

6.67

0.33

0.67

0.33

..................................................GTAAGCACCTTGCCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.25

0.25

..................................................GTAAGCACCTTGCCTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.25

0.25

............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACAACTGACCTGATCT..............................................................

1.00

...............................................................................................................................................................................................................GGGAGTGGTGAGGACTCTA............................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

..................CGGACTTCAGCAACCCGCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

.......................................................................................................................................................................................................................TGAGGACTGTGGCTAGA......................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

..............................................................................................................................................................................................................................................................................................................................................................................................ACTGGCCCCCCAGCCAAAC.............................................................................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................................................................GGTGAGGACTGTGGCTCTG......................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAGGATCGTTGCCCCTCCTCC.................................................................................................................

1.00

........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATCGTTGCCCCTCCTCC.................................................................................................................

1.00

..................................................GTAAGCACCTTGCCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.20

0.40

0.20

...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATACGCGGGAGTATGAA................................

1.00

..................................................GTAAGCACCTTGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.40

0.20

...........................................................................................................................................................................................................................................................................................................................................................................GGATGAACCAAACACCGG.................................................................................................................................................................................

1.00

0.00

1.00

.................................................GGTAAGCACCTTGCCTGCGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

.....ATCACCGTGGAGTCGGACGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

1.00

0.00

1.00

..................................................GTAAGCACCTTGCCTGCGGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.67

6.67

0.33

..................................................GTAAGCACCTTGCCTGCTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.67

6.67

0.33

..................................................GTAAGCACCTTGCCTGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.50

1.25

0.25

..................................................GTAAGCACCTTGCCTGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.50

1.25

0.50

..................................................GTAAGCACCTTGCCTGCGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGCACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGCAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGCGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGCTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGCGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGCGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGCGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGCAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGCGCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGCGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGCGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.33

6.67

0.33

..................................................GTAAGCACCTTGCCTGAGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.25

1.25

0.25

..................................................GTAAGCACCTTGCCTGAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.25

1.25

0.25

..................................................GTAAGCACCTTGCCTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.25

1.25

0.25

..................................................GTAAGCACCTTGCCTGAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.25

1.25

0.25

..................................................GTAAGCACCTTGCCTCAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.20

1.00

0.20

..................................................GTAAGCACCTTGCCTACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.20

1.00

0.20

..................................................GTAAGCACCTTGCCTCCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.20

1.00

0.20

..................................................GTAAGCACCTTGCCTTCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

0.20

1.00

0.20