ID: uc002djs.3_intron_20_0_chr16_21901612_r
GENE: LOC23117(2)
chr16:21901562-21902134-


(1)
AGO2.ip
(4)
B-CELL
(3)
BRAIN
(12)
BREAST
(21)
CELL-LINE
(17)
CERVIX
(2)
HEART
(3)
HELA
(6)
LIVER
(1)
OTHER
(38)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
ATTCTGTCTTCCGTCTTTCCATAAATTTTGCAAAGGCCTTTTAGCTGACAGTAAGACTCTGTTTTTTTTTTTTTCTATTTTGTTTATCAGTCCTTAAAAGGGTCTTTGGTAATGGGAGATGGTCATGAATCGAGCTCTTTTCCTGACCTGAAGATGTGTAATCCTCATTTTAATGACAGATACACAGTCTTGATTTTTTTTCATTCTTAGTATTAGAAAAATGTTTTGAAGTGATTGTCACATTTTTAAGCTAACGTGAATGTTTATAGTTTACATATACTTTTACATTTTCTCTCAGAAAAAGTTTTGTGTGATGACCCATCAGTTACATTACGTGGGTTTTGTTGAATGTGTCATTTTTCCAAATGTGACAGTCAATGAGGATTCTGGACAAGAACAGTGCCTAGTCTATAGTAGGCACTCACTCTTTGTTGAATGAATGAATGGATTCAGATAATTATGACAAACTGGGATATAATTTCTTTTGGCCAGCTGAAAGTAACTGTCTTTTAATGTTTAATAGCTCTCGTTGAAGATGTGAATATCTGTCTGCAGGCATGCAGCAGTCTACAT
.....................................................((((((.((((......((((((((......((((((.(((.....)))...)))))))))))))).......)))).))).)))...................................................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.....................................................................................138.................................................................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR040022(GSM532907)
G575N. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040016(GSM532901)
G645N. (cervix)
SRR040012(GSM532897)
G648N. (cervix)
SRR189785SRR040014(GSM532899)
G623N. (cervix)
SRR040032(GSM532917)
G603N. (cervix)
SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189784GSM532930(GSM532930)
G702T. (cervix)
SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)
SRR189782SRR343335GSM532879(GSM532879)
G659N. (cervix)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR343334SRR040011(GSM532896)
G529T. (cervix)
SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)
SRR040026(GSM532911)
G220N. (cervix)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR191469(GSM715579)
117genomic small RNA (size selected RNA from . (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM532929(GSM532929)
G702N. (cervix)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
SRR040007(GSM532892)
G601T. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040025(GSM532910)
G613T. (cervix)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR040019(GSM532904)
G701T. (cervix)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
.................................................................................................................GGGAGATGGTCATGAATCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................216.000.00---6.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................GAAGTGATTGTCACATCAGG......................................................................................................................................................................................................................................................................................................................................203.000.00-----------3.00------------------------------------------------------------------------------------------------------
...................................................TAAGACTCTGTTTTTTCTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................202.000.00-----2.00------------------------------------------------------------------------------------------------------------
.................................................................................................AAGGGTCTTTGGTAATGGGAGATGGTCACCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................312.000.00-2.00----------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................AGTAGGCACTCACTCTGTTG.............................................................................................................................................202.000.002.00-----------------------------------------------------------------------------------------------------------------
.................................................................TTTTTTTTTCTATTTTGAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................212.000.002.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................ATGGGAGATGGTCATGAATCGAGCTCTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................292.000.002.00-----------------------------------------------------------------------------------------------------------------
....TGTCTTCCGTCTTTCTATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00----------------1.00-------------------------------------------------------------------------------------------------
................................................................................................AAAGGGTCTTTGGTAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00----------------------------------------1.00-------------------------------------------------------------------------
.....................................................AGACTCTGTTTTTTTTTTTTGTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.001.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................CATATACTTTTACATTTTCTCCCAG...................................................................................................................................................................................................................................................................................251.000.00--------1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................ACATATACTTTTACAAGGT..........................................................................................................................................................................................................................................................................................191.000.00-------------1.00----------------------------------------------------------------------------------------------------
............................................................GTTTTTTTTTTTTTCTATTTTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00----------------1.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................CATATACTTTTACATTTTCTCTCAT...................................................................................................................................................................................................................................................................................251.000.00--------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................AGGGTCTTTGGTAATGGGAGATGGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................261.000.001.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................TTTACATATACTTTTACATTTTCTCCCAG...................................................................................................................................................................................................................................................................................291.000.00-----------------------1.00------------------------------------------------------------------------------------------
..................................................................TTTTTTTTCTATTTTGTTTACCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00-1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGGCCAGCTGAAAAA.........................................................................191.000.00-------------------------------------1.00----------------------------------------------------------------------------
.............................................................TTTTTTTTTTTTTCTATTTTGTTTCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................281.000.00-----1.00------------------------------------------------------------------------------------------------------------
.....................................................AGACTCTGTTTTTTTTTTTTTCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00-1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................TTTACATATACTTTTACATTTTCTCTCAG...................................................................................................................................................................................................................................................................................2931.001.00--------0.33----------0.33---0.33------------------------------------------------------------------------------------------
........................................................................................................TTTGGTAATGGGAGATGGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00-------1.00----------------------------------------------------------------------------------------------------------
.......................................................ACTCTGTTTTTTTTTTTTTCTATTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-1.00----------------------------------------------------------------------------------------------------------------
....................................................................................................................................AGCTCTTTTCCTGACCTGAAGACGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................261.000.00-1.00----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................ACATATACTTTTACAAGGG..........................................................................................................................................................................................................................................................................................191.000.00-------------1.00----------------------------------------------------------------------------------------------------
.................................................................TTTTTTTTTCTATTTTGTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................221.000.00-1.00----------------------------------------------------------------------------------------------------------------
..........................................................CTGTTTTTTTTTTTTTCGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.001.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTTTGAAGTGATTGTAAAA...........................................................................................................................................................................................................................................................................................................................................191.000.00---------------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATATCTGTCTGCAGGCAGGC............241.000.00------------------------1.00-----------------------------------------------------------------------------------------
..............................................................TTTTTTTTTTTTCTATTGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.001.00-----------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................TGAGGATTCTGGACAAGAACAGCGCC.........................................................................................................................................................................261.000.001.00-----------------------------------------------------------------------------------------------------------------
..............................................................TTTTTTTTTTTTCTATTTTGTTCATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................261.000.001.00-----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................TACATTTTCTCTCAGCAT................................................................................................................................................................................................................................................................................181.000.00-----1.00------------------------------------------------------------------------------------------------------------
..............................................................TTTTTTTTTTTTCTATTTTGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.001.00-----------------------------------------------------------------------------------------------------------------
...........................................................TGTTTTTTTTTTTTTCGTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.001.00-----------------------------------------------------------------------------------------------------------------
.....................................................AGACTCTGTTTTTTTTTTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.001.00-----------------------------------------------------------------------------------------------------------------
.......................................................ACTCTGTTTTTTTTTTTTTCTATTTCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................281.000.00-1.00----------------------------------------------------------------------------------------------------------------
..........................................................................................................TGGTAATGGGAGATGGTCATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00--------------------1.00---------------------------------------------------------------------------------------------
......TCTTCCGTCTTTCCATAAATCTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00--------1.00---------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................ACACAGTCTTGATTTTTTTTCATTCCTAG...........................................................................................................................................................................................................................................................................................................................................................................291.000.001.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................GATGGTCATGAATCGAGCTCTTTTCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2731.000.33---------------------------------------------1.00--------------------------------------------------------------------
......................................................................TTTTCTATTTTGTTTATCAGTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.00-1.00----------------------------------------------------------------------------------------------------------------
...............................................................TTTTTTTTTTTCTATTTTGTTAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.001.00-----------------------------------------------------------------------------------------------------------------
..............................................................TTTTTTTTTTTTCTATTTTGGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.001.00-----------------------------------------------------------------------------------------------------------------
..............................................................TTTTTTTTTTTTCTATTTTCATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00-------------------1.00----------------------------------------------------------------------------------------------
.........................................................TCTGTTTTTTTTTTTTTCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00-1.00----------------------------------------------------------------------------------------------------------------
.......................................................ACTCTGTTTTTTTTTTTTTCCCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................241.000.001.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................AGGGTCTTTGGTAATGGGAGATGGTCACCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................301.000.001.00-----------------------------------------------------------------------------------------------------------------
.....................................................AGACTCTGTTTTTTTTTTTTTCTATTTTGTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3211.001.001.00-----------------------------------------------------------------------------------------------------------------
...........................................................TGTTTTTTTTTTTTTCGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................TCTGGACAAGAACAGTGT..........................................................................................................................................................................181.000.00--------------------------------1.00---------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACAAACTGGGATATAATTTCTTTTGGCCAGCTGAAAGTAACTGTCTTTTAATGTTTAATAG..................................................6460.500.50------------------------------------------------------0.50-----------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAATATCTGTCTGCAGGCATGC............2780.380.38------------0.12-------------------------------------0.25---------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAATATCTGTCTGCAG..................1980.380.38----------------------------------------------0.25----0.12--------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAATATCTGTCTGCAGGC................2280.380.38---------------------------------------------------0.12--------------------------------------0.12--------------------0.12--
.................................................................................................................................................................................................................................................................................................................TTTGTGTGATGACCCATCAGTTAC....................................................................................................................................................................................................................................................2480.380.38----------------------0.38-------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................ACGTGGGTTTTGTTGAATGTGTCATT.......................................................................................................................................................................................................................2660.330.33------------0.33-----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................TTACATATACTTTTACATTTTCTCTCAG...................................................................................................................................................................................................................................................................................2830.330.33---------------------------------------------------------------0.33--------------------------------------------------
.....................................................................................................................GATGGTCATGAATCGAGCTCTTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2530.330.33------------------------------------------------0.33-----------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................AATGTGACAGTCAATGAGGATTC..........................................................................................................................................................................................2330.330.33--------------------------------------------------------------0.33---------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTTGAAGATGTGAATATCTGT........................2660.330.33------------------------------------------------------------------0.17---------------0.17-------------------------------
...............................................................................................AAAAGGGTCTTTGGTAATGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.330.33----------------------------------------------0.33-------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................GACAAGAACAGTGCCTAGTCTATAGTAGG...........................................................................................................................................................2930.330.33-------------------------------------------------0.33----------------------------------------------------------------
..............................................................................................................................GAATCGAGCTCTTTTCCTGACCTGAAGATGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................3230.330.33-------------------------------------------------------------0.33----------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAATATCTGTCTGCAGGCA...............2280.250.25------------------------0.12--------------------------0.12--------------------------------------------------------------
..............................................................................................................................................................................................................................GTTTTGAAGTGATTGTC..............................................................................................................................................................................................................................................................................................................................................1780.250.25----------------------------------------------0.25-------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATATCTGTCTGCAGGCATGC............2480.250.25----------------------------------------------------0.12--------------------------------------------------------0.12----
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAATATCTGTCTGCAGGCAT..............2480.250.25-----------------------------------------------0.12-----------0.12------------------------------------------------------
........................................................................................................................................CTTTTCCTGACCTGAAGATGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................2340.250.25----------------------------------------------------------0.25-------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAATTTCTTTTGGCCAG.................................................................................2080.250.25-----------------------------------------------0.25------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTTGAAGATGTGAATATC...........................2180.250.25---------------------------------------------------------------------------------------------------0.12--------0.12-----
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATATCTGTCTGCAGGCATGC............2380.250.25------------------------0.12-----------------------------------------------------------------------------0.12-----------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGATGTGAATATCTGTCTGCAGGC................2880.250.25------------0.25-----------------------------------------------------------------------------------------------------
..................................................................TTTTTTTTCTATTTTGTTTATCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.250.25-0.25----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGATGTGAATATCTGTCTGCAGGCATG.............3180.250.25---------------------------------------------------------0.12-------------------------------------0.12------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATATCTGTCTGC....................1680.250.25---------------------------------------------------------------------0.12-------------------0.12------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAATATCTGTCTGCAGG.................2080.250.25--------------------------------------------------------0.25---------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGTGAATATCTGTCTGCAGGCAT..............2680.250.25-----------------------------------------------------0.25------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAATATCTGTCTGCAG..................2080.250.25----------------------------------------------------0.12-------------------0.12-----------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATGTGAATATCTGTCTGCAGGCATGCA...........3080.250.25-----------------------------------------------------------------0.12--------------------------------------------0.12---
.............................................................................................................................................CCTGACCTGAAGATGT................................................................................................................................................................................................................................................................................................................................................................................................................................1680.250.25--------------------------------------------------------------------------0.25---------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................TATAGTAGGCACTCACTCT.................................................................................................................................................1940.250.25----------------------------------------------------------------------0.25-------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................GAACAGTGCCTAGTCTATAGTAG............................................................................................................................................................2340.250.25------------------------------------------------------------0.25-----------------------------------------------------
.................................................................................................................GGGAGATGGTCATGAATCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.250.25--------------------0.25---------------------------------------------------------------------------------------------
...................CATAAATTTTGCAAAGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.220.22------------------------------------------------------------------0.11---------------------------------------------0.11-
...........................................................................................................................................TTCCTGACCTGAAGATGT................................................................................................................................................................................................................................................................................................................................................................................................................................1850.200.20------------------------------------------------0.20-----------------------------------------------------------------
....................................................................................................................................................TGAAGATGTGTAATCCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................1850.200.20-------------------------0.20----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................ATGAGGATTCTGGACAAGAACAGTG...........................................................................................................................................................................2560.170.17---------------------------------------------------0.17--------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................AGTCAATGAGGATTCTGGACAAGAACAGTGC..........................................................................................................................................................................3160.170.17------------------------------------------------0.17-----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................CAATGAGGATTCTGGACAAGAAC...............................................................................................................................................................................2360.170.17-------------------------------------------------0.17----------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................GTCAATGAGGATTCTGGAC.....................................................................................................................................................................................1960.170.17-------------------------------------------------0.17----------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................TGACAGTCAATGAGGATTCTGG.......................................................................................................................................................................................2260.170.17-----------------------------------------------------------------------------0.17------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................GAGGATTCTGGACAAGAACAGTGCCTA.......................................................................................................................................................................2760.170.17-----------------------------------------------0.17------------------------------------------------------------------
..................................................................................................AGGGTCTTTGGTAATGGGAGATGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.170.170.17-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................CAGTCAATGAGGATTCTGGACAAGAACAGTG...........................................................................................................................................................................3160.170.17-----------------------------------------------------------------0.17------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATAGCTCTCGTTGAAGA.....................................2060.170.17---------------------------------------------------------------------------------0.17--------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTCTCGTTGAAGATGTGAATATC...........................2760.170.17--------------------------------------------------------0.17---------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................GTCAATGAGGATTCTGGACA....................................................................................................................................................................................2060.170.17----------------------------------------------------------------------------0.17-------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTTCTTTTGGCCAGCTGAAAGTAACTGTCTTTTAATGTTTAATAG..................................................4860.170.17-------------------------------------------------------0.17----------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTTGAAGATGTGAAT..............................2060.170.17--------------------------------------------------------------------------------0.17---------------------------------
................................................................................................................................................................................................................................................................................................................................................................................TGACAGTCAATGAGGATTCTGGACA....................................................................................................................................................................................2560.170.17------------0.17-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................CAGTCAATGAGGATTCTGGACAAGAACAG.............................................................................................................................................................................2960.170.17---------------------0.17--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................ATGAGGATTCTGGACAAGAACA..............................................................................................................................................................................2260.170.17------------------------------------------------------------------------------0.17-----------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................TCAATGAGGATTCTGGACAAG..................................................................................................................................................................................2160.170.17-------------------------------------------------------------------------------0.17----------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAATGTTTAATAGCTCTCGTTGAA.......................................2760.170.17--------------------------------------------------0.17---------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTTGAAGATGTG.................................1760.170.17---------------------------------------------------------0.17--------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTAATGTTTAATAGCTCTCGTTGA........................................2860.170.17---------------------------------------------------------------------------0.17--------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................AATGAGGATTCTGGACAAGAACAGTGCCTA.......................................................................................................................................................................3060.170.17----------------------------------------------------------------0.17-------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCACTCTTTGTTGAATGAATGAATGGATTCAGATAATTATGACAAACTGGGATATAATTTCTTTTGGCCAGCTGAAAGTAACTGTCTTTTAATGTTTAATA...................................................10260.170.17-------------------------------------------------------0.17----------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TTACGTGGGTTTTGTTGAATGTGTC..........................................................................................................................................................................................................................2560.170.170.17-----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................CTGGACAAGAACAGTGCCT........................................................................................................................................................................1970.140.14--------------------0.14---------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................AGGATTCTGGACAAGAACAGTG...........................................................................................................................................................................2270.140.14----------------------------------------------------------------------------------------0.14-------------------------
...............................................................................................................................................................................................................................................................................................................GTTTTGTGTGATGACCC.............................................................................................................................................................................................................................................................1770.140.14---------------------------------------------------------------------------------------0.14--------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................GATTCTGGACAAGAACAGTGCCTAGT.....................................................................................................................................................................2670.140.14--------------------------------------------------------------------------------------0.14---------------------------
............................................................................................................................................................................................................................................................................................................................................................................................AGGATTCTGGACAAGAACAGTGCCTAGTC....................................................................................................................................................................2970.140.14-----------------------------------------------0.14------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................GGATTCTGGACAAGAACAGTGCCTAG......................................................................................................................................................................2670.140.14------------------------------------------------------------------------------------0.14-----------------------------
..............................................................................................................................................................................................................................................................................................................AGTTTTGTGTGATGACCCA............................................................................................................................................................................................................................................................1970.140.14--------------------------------------------------0.14---------------------------------------------------------------
.............................................................................................................................................................................................................................................................ACGTGAATGTTTATAGTT..............................................................................................................................................................................................................................................................................................................1870.140.14-----------------------------------------------0.14------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................CTCAGAAAAAGTTTTGTGTGATGACCCATCAG........................................................................................................................................................................................................................................................3270.140.14-------------------------------------------------------------------0.14----------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TTACGTGGGTTTTGTTGAATG..............................................................................................................................................................................................................................2170.140.14----------------------------------------------0.14-------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................TGGGTTTTGTTGAATGTGTC..........................................................................................................................................................................................................................2070.140.14-----------------------------------------------------------------------------------0.14------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................GATTCTGGACAAGAACAGTGCCTA.......................................................................................................................................................................2470.140.14----------------------------------------------------0.14-------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................GATTCTGGACAAGAACAGTGCCT........................................................................................................................................................................2370.140.14----------------------------------------------------------------0.14-------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................AGGATTCTGGACAAGAACAGTGC..........................................................................................................................................................................2370.140.14-------------------------------------------------------------------------------------0.14----------------------------
...................................................................................................................................................................................ATACACAGTCTTGATTTTTTTTCATTCTTAG...........................................................................................................................................................................................................................................................................................................................................................................3170.140.14-----0.14------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................GGACAAGAACAGTGCCTAGTCT...................................................................................................................................................................2270.140.14----------------------------------------------------------0.14-------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................TTACATTACGTGGGTTTTGTTGAA................................................................................................................................................................................................................................2470.140.14--------------------------------------------------------------------0.14---------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTTGAAGATGTGAATAT............................2180.120.12-------------------------------------------------------------------------------------------------0.12----------------
..................................................................................................................................................................CCTCATTTTAATGACAGATACA.....................................................................................................................................................................................................................................................................................................................................................................................................2280.120.12---------0.12--------------------------------------------------------------------------------------------------------
.......CTTCCGTCTTTCCATAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1780.120.12-----------------------------------------------------------------------0.12------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGATGTGAATATCTGT........................1980.120.12-------------------------------------------------------------------------------------------0.12----------------------
...........................................................................................................................................................................................................................................................................................................................................................................................GAGGATTCTGGACAAG..................................................................................................................................................................................1680.120.12--------------------------------------------------------------------------------------------------0.12---------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAAGATGTGAATATCTGTCTGC....................2580.120.12-------------------------------------------------------------------0.12----------------------------------------------
..................................................................................................................................................................................................................................................................................ATATACTTTTACATTTTCTCTCAG...................................................................................................................................................................................................................................................................................2480.120.12-------------------0.12----------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTTGAAGATGTGAAT..............................1880.120.12-----------------------------------------------------------------------------------------------------------0.12------
..................................................................................................................................................................................................................TATTAGAAAAATGTTTTGAAGTGATTGTCA.............................................................................................................................................................................................................................................................................................................................................3080.120.12-----------------------------------------------------0.12------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAAGATGTGAATATCTGTCTGCAGGCA...............3180.120.12-----------------------------------------------------------------------0.12------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATGTGAATATCTGTCTGCAGGCAT..............2780.120.12------------0.12-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATGTGAATATCTGT........................1880.120.12---------------------------0.12--------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATGTGAATATCTGTCTGCAG..................2380.120.12------------------------------------------------------------------------0.12-----------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTTGAAGATGTGAA...............................1780.120.12---------------------------------------------------------------------------------------------------------0.12--------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATATCTGTCTGCAG..................1780.120.12--------------------------------------------------------------------0.12---------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATTCAGATAATTATGACAAACTGGGA....................................................................................................2980.120.12------------0.12-----------------------------------------------------------------------------------------------------
...................CATAAATTTTGCAAAGGCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.120.12-----------------------------------------------------0.12------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGATGTGAATATCTGTCTGCAGGCATGC............3180.120.12-------------------------------------------------------------------------0.12----------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATTCAGATAATTATGACAAACTGGG.....................................................................................................2980.120.12---------------------------------------------------------------------------------------------0.12--------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCACTCACTCTTTGTTGAATGAATGAATGGATTCAGATAATTATGAC.............................................................................................................5080.120.12-------------------------------------------------------0.12----------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAATATCTGTCTGCAGGCATGC............2580.120.12---------------------------------------------------------------------0.12--------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAAGATGTGAATAT............................1980.120.12------------------------------------------------------------------------------------------------0.12-----------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGTTGAATGAATGAATGGATTC..........................................................................................................................2680.120.12------------0.12-----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAAGATGTGAATATCTGTCTGCAGGC................3180.120.12-----------------------------------------------------------------------------------------------------0.12------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTGGCCAGCTGAAAG..........................................................................1980.120.12--------------------------------------------------------------------------------------------------------0.12---------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCTGTCTGCAGGCATGCAGC.........2580.120.12------------------------------------------------------------0.12-----------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATATCTGTCTGCAGGCATGCAGCA........2780.120.12-------------------------------------------------------------------------0.12----------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTGTCTGCAGGCATG.............1980.120.12-----------------------------------------------------------0.12------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAATATCTGTCTGCAGAA................2280.120.25-------------------------------------------------------------------------------------------------------0.12----------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAATATCTGTCTGCAGGCATGCAGC.........2880.120.12------------0.12-----------------------------------------------------------------------------------------------------
...................................................TAAGACTCTGTTTTTTTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.120.12-----0.12------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAATATCTGTCTGCAGGCATG.............2580.120.12----------------------------------------------------------------------------------------------------------0.12-------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATATCTGTCTGCAGGCATGCAG..........2680.120.12----------------------------------------------------------------------------------------------------0.12-------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGATGTGAATATCTGTCTGCAGG.................2780.120.12-----------------------------------------------------------0.12------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAATATCTGTCTGCAGGC................2380.120.12--------------------------------------------------------------------------------------------0.12---------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTTGAAGATGTGAATATCTGTCTGC....................2980.120.12------------0.12-----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCACTCACTCTTTG..............................................................................................................................................1780.120.12-----0.12------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAATATCTGTCTGCAGGCAT..............2380.120.12----------------------------------------------------------------------------------------------0.12-------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATGTGAATATCTGTCTGCAGGCA...............2680.120.12----------------------------------------------------0.12-------------------------------------------------------------
....................ATAAATTTTGCAAAGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.110.11-----------------------------------------------------------------------------------------------------------------0.11
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATGGATTCAGATA.....................................................................................................................1790.110.11---------------------0.11--------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................GAAGTGATTGTCACATTTT.......................................................................................................................................................................................................................................................................................................................................1990.110.11---------------------0.11--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGAAAGTAACTG....................................................................1690.110.11---------------------------------------------------------0.11--------------------------------------------------------

Antisense strand
ATTCTGTCTTCCGTCTTTCCATAAATTTTGCAAAGGCCTTTTAGCTGACAGTAAGACTCTGTTTTTTTTTTTTTCTATTTTGTTTATCAGTCCTTAAAAGGGTCTTTGGTAATGGGAGATGGTCATGAATCGAGCTCTTTTCCTGACCTGAAGATGTGTAATCCTCATTTTAATGACAGATACACAGTCTTGATTTTTTTTCATTCTTAGTATTAGAAAAATGTTTTGAAGTGATTGTCACATTTTTAAGCTAACGTGAATGTTTATAGTTTACATATACTTTTACATTTTCTCTCAGAAAAAGTTTTGTGTGATGACCCATCAGTTACATTACGTGGGTTTTGTTGAATGTGTCATTTTTCCAAATGTGACAGTCAATGAGGATTCTGGACAAGAACAGTGCCTAGTCTATAGTAGGCACTCACTCTTTGTTGAATGAATGAATGGATTCAGATAATTATGACAAACTGGGATATAATTTCTTTTGGCCAGCTGAAAGTAACTGTCTTTTAATGTTTAATAGCTCTCGTTGAAGATGTGAATATCTGTCTGCAGGCATGCAGCAGTCTACAT
.....................................................((((((.((((......((((((((......((((((.(((.....)))...)))))))))))))).......)))).))).)))...................................................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.....................................................................................138.................................................................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR040022(GSM532907)
G575N. (cervix)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040016(GSM532901)
G645N. (cervix)
SRR040012(GSM532897)
G648N. (cervix)
SRR189785SRR040014(GSM532899)
G623N. (cervix)
SRR040032(GSM532917)
G603N. (cervix)
SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR189784GSM532930(GSM532930)
G702T. (cervix)
SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)
SRR189782SRR343335GSM532879(GSM532879)
G659N. (cervix)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR343334SRR040011(GSM532896)
G529T. (cervix)
SRR191528(GSM715638)
130genomic small RNA (size selected RNA from . (breast)
SRR040026(GSM532911)
G220N. (cervix)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR191469(GSM715579)
117genomic small RNA (size selected RNA from . (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM532929(GSM532929)
G702N. (cervix)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
SRR040007(GSM532892)
G601T. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040025(GSM532910)
G613T. (cervix)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040008(GSM532893)
G727N. (cervix)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR040019(GSM532904)
G701T. (cervix)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTGTTGAATGACCA................................................................................................................................... 1941.000.00--9.00-5.00-4.002.00-3.003.00---2.00---2.00---1.00----1.001.001.001.00--1.001.00-1.00--1.00---1.001.00---------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................ACGTGGGTTTTGTTGACAG.............................................................................................................................................................................................................................. 192.000.00-----------------2.00------------------------------------------------------------------------------------------------
......................................................GACTCTGTTTTTTTTTGCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 202.000.00---------------2.00--------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTTTGTTGAATCCA..................................................................................................................................... 181.000.00----1.00-------------------------------------------------------------------------------------------------------------
.....................................................AGACTCTGTTTTTTTTTTTTAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 231.000.00--------------------------------------1.00---------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTGTTGAATGACA.................................................................................................................................... 181.000.00-------1.00----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTCACTCTTTGTAGAA......................................................................................................................................... 191.000.00--------------------------1.00---------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTGTTGAATGACC.................................................................................................................................... 181.000.00-------------------------------1.00----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTGTTGAATGACCC................................................................................................................................... 191.000.00-----------------------------------1.00------------------------------------------------------------------------------
...CTGTCTTCCGTCTTTGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 181.000.00------------------------------------------1.00-----------------------------------------------------------------------
.......................................................ACTCTGTTTTTTTTTTTTTTCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 231.000.00-------------------------1.00----------------------------------------------------------------------------------------
................................................................TTTTTTTTTTCTATTTTGTTTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 231.000.00-----------------------------------------1.00------------------------------------------------------------------------
.......................................................................................................................................................................................TACTAAGAATGAAAAAAAATCAAGACTGT......................................................................................................................................................................................................................................................................................................................................................................... 2970.290.29------------0.29-----------------------------------------------------------------------------------------------------
.....................................................................TAAGGACTGATAAACAAAATAGAAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 2740.250.25------------0.25-----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTGCTGCATGCCTGC... 1980.120.12------------0.12-----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................TCAACAAAACCCACG................................................................................................................................................................................................................................. 1580.120.12--------------------------0.12---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAATCCATTCATTCATTCAACAAAGA....................................................................................................................... 2980.120.12------------0.12-----------------------------------------------------------------------------------------------------