| (1) AGO2.ip | (2) B-CELL | (1) BREAST | (9) CELL-LINE | (2) CERVIX | (1) HELA | (2) LIVER | (1) OTHER | (9) SKIN |
| CCTTCTGTATGTTCAGCAAAGAGAGCTTGCAGTGACCTCCCCAAAGGATGGTAGGTTAGGAAGCAGTGAATTGGGCGTTATCCCAAAAGGCTATTGGATATTTTATTTTATTTCTTTTTTAAACAGGCTCCATCTCCATTCTGGGTTCTGATGATGCCACTACTTGTCACATTGTG ......................................................(((((((((.((((((.((((...(((((............))))).)))).)))))).))))))..))).................................................... ..................................................51.........................................................................126................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR189784 | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | GSM532874(GSM532874) G699T. (cervix) | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040008(GSM532893) G727N. (cervix) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | GSM416733(GSM416733) HEK293. (cell line) | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | SRR037931(GSM510469) 293GFP. (cell line) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...TCTGTATGTTCAGCAAAGAGAGCTTGCAGTG.............................................................................................................................................. | 31 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................TATTTTATTTTATTTCTTTGCAG....................................................... | 23 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................CTGGGTTCTGATGATGCCA................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................AAAGGATGGTAGGTTAGGAAGCAG.............................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................ATTGGATATTTTATTTTAGGGG.............................................................. | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................TATTTTATTTTATTTCTTTTAAGC...................................................... | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................TCTGGGTTCTGATGATGC................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................ATTTTATTTTATTTCTTCAG......................................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................TGGATATTTTATTTTTGGC............................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................ATTTTATTTTATTTCTTTCAAG....................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ..................AAGAGAGCTTGCAGTGACCTCCCCAAAGGATGGC............................................................................................................................ | 34 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................ATTGGATATTTTATTTTAGGG............................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................TGGATATTTTATTTTATTTCTGGC.......................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................ATTCTGGGTTCTGATGATGCC.................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................ATTGGATATTTTATTTTAGTTA.............................................................. | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................TTTATTTCTTTTTTAACTAG.................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................GTAGGTTAGGAAGCAGTGAATTGGG..................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TTTTATTTTATTTCTTTTTGGAG..................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................ATATTTTATTTTATTTCTTTATG........................................................ | 23 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CCTTCTGTATGTTCAGCAAAGAGAGCTTGCAGTGACCTCCCCAAAGGATGGTAGGTTAGGAAGCAGTGAATTGGGCGTTATCCCAAAAGGCTATTGGATATTTTATTTTATTTCTTTTTTAAACAGGCTCCATCTCCATTCTGGGTTCTGATGATGCCACTACTTGTCACATTGTG ......................................................(((((((((.((((((.((((...(((((............))))).)))).)))))).))))))..))).................................................... ..................................................51.........................................................................126................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR330896(SRX091734) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330921(SRX091759) tissue: normal skindisease state: normal. (skin) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR189784 | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR033722(GSM497067) KMS12 cell line (KMS12). (B cell) | SRR330863(SRX091701) tissue: skin psoriatic involveddisease state:. (skin) | GSM532874(GSM532874) G699T. (cervix) | SRR330897(SRX091735) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040008(GSM532893) G727N. (cervix) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330858(SRX091696) tissue: skin psoriatic involveddisease state:. (skin) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | GSM416733(GSM416733) HEK293. (cell line) | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | SRR037931(GSM510469) 293GFP. (cell line) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................CAGAATGGAGATGGAGCCTGT................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................TTGGGGAGGTCACTGCAAG.................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................CAGTGACCTCCCCAAAGTTAG.............................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................ACAATGTGACAAGTAGTGGCATCA. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................CAGGCTCCATCTCCAAGA................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................AACCCAGAATGGAGATGGAGCCTG............................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................TTTATTTTATTTCTTTTGAGG...................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................TTCTGGGTTCTGATGAAGG................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .................................GACCTCCCCAAAGGACTTA............................................................................................................................ | 19 | 0.50 | 0.00 | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | 0.12 | - | 0.12 | - | |
| .CTTTGCTGAACATACAGAAG........................................................................................................................................................... | 20 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TCCTTTGGGGAGGTC................................................................................................................................ | 15 | 8 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | 0.12 | - | - | - | - |
| .................................GACCTCCCCAAAGGAC............................................................................................................................... | 16 | 0.25 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | |
| .................................GACCTCCCCAAAGGACTT............................................................................................................................. | 18 | 0.12 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - | |
| .................................GACCTCCCCAAAGGACT.............................................................................................................................. | 17 | 0.12 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 |