ID: uc002dbp.1_intron_4_0_chr16_11940460_r
GENE: RSL1D1(4)
chr16:11940410-11940601-


(3)
BREAST 		(9)
CELL-LINE 		(1)
CERVIX 		(4)
HEART 		(6)
HELA 		(1)
KIDNEY 		(3)
LIVER 		(3)
OTHER 		(5)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
AGGCGGCTCTTACCCTCACTCATTGGGAGACATTTCTATCAAAGAAAGAAGTAAGTTTCTTAGTAATGACTGGACTTTAGCAGCATGAAGCTTCTAGGTGTGTATGCATTGTGTTCTGAATGCCTGTGTGTTTATTTTGTAGAGTTCCAGTATCTGTAAACCTTCTGTCCAAGAATTTATCAAGAGAGATCA
.......................................................................(((((((.((((.(((((((...(((((((....((.....)).....))))))).)).))))).))))))))))).............................................
..................................................51...............................................................................................148..........................................
SizePerfect hitTotal NormPerfect NormDRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR029130(GSM416759)
DLD2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR343334SRR037943(GSM510481)
293DcrTN. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040011(GSM532896)
G529T. (cervix)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		TAX577744(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR029125(GSM416754)
U2OS. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
..................................................GTAAGTTTCTTAGTAATGACTGGACTTTAGCAGCATGAAGCTTCTAGGTGTGTATGCATTGTGTTCTGAATGCCTGTGTGTTTATTTTGTAG..................................................92178.0078.0068.008.00----------------------1.00-----1.00------
..................................................GTAAGTTTCTTAGTAATGACTGGACTTTAGCAGCATGAAGCTTCTAGGTGTGTATGCATTGTGTTCTGAATGCCTGTGTGTTTATTTTG.....................................................8915.005.00-5.00-----------------------------------
.......................TGGGAGACATTTCTATCAAAGAAAGAAA.............................................................................................................................................283.000.00------3.00------------------------------
...CGGCTCTTACCCTCACTCATTGGGAGACAT...............................................................................................................................................................3013.003.00--------3.00----------------------------
........................GGGAGACATTTCTATCAAAG....................................................................................................................................................2012.002.00----1.001.00-------------------------------
......CTCTTACCCTCACTCATTGGGAG...................................................................................................................................................................2312.002.00----1.001.00-------------------------------
...................................................................................................................................................................TCTGTCCAAGAATTTATCAAGAGAGATC.2812.002.00---2.00---------------------------------
...................................................................................................................................................................TCTGTCCAAGAATTTATCAAG........2112.002.00----1.001.00-------------------------------
......................TTGGGAGACATTTCTATCA.......................................................................................................................................................1912.002.00-------2.00-----------------------------
.....................................................................................................................................................................TGTCCAAGAATTTATCAAGAGAGATC.2612.002.00---2.00---------------------------------
.............................ACATTTCTATCAAAGAAAGAAAGT...........................................................................................................................................241.000.00---------------1.00---------------------
..................................................................................................................................................................TTCTGTCCAAGAATTTATCAAGAGA.....2511.001.00---1.00---------------------------------
...................TCATTGGGAGACATTTCTA..........................................................................................................................................................1911.001.00-------------------------1.00-----------
..........................................................................................................................................................................AAGAATTTATCAAGAGAGATC.2111.001.00--------------------1.00----------------
............................................AAAGAAGTAAGTTTCTTA..................................................................................................................................1831.001.00--0.33-----------------------------0.67----
.....................................................................................................................................ATTTTGTAGAGTTCCTAA.........................................181.000.00----------------------1.00--------------
..................................................GTAAGTTTCTTAGTAATGACTGGAC.....................................................................................................................2511.001.00-------------1.00-----------------------
...........................................................................................................................................................GTAAACCTTCTGTCCAAGA..................1911.001.00---------------------1.00---------------
..........................................................................................................................................................TGTAAACCTTCTGTCCTTG...................1921.000.50---------1.00---------------------------
..................................................GTAAGTTTCTTAGTAATGACTGGACTTTAGCAGCATGAAGCTTCTA................................................................................................4611.001.00-1.00-----------------------------------
....................................................................................................................................................................CTGTCCAAGAATTTATCAAGAG......2211.001.00-----------------------1.00-------------
...................................................................................................................................................CAGTATCTGTAAACCTTCTGTCCAAGA..................2711.001.00-----------------1.00-------------------
.............................................................................................................................GTGTGTTTATTTTGTAGAA................................................191.000.00----------------------------1.00--------
.........................................................................................................................................................CTGTAAACCTTCTGTCCAAG...................2011.001.00----------1.00--------------------------
..............................CATTTCTATCAAAGAAAGAA..............................................................................................................................................2011.001.00-------------------------------1.00-----
................CACTCATTGGGAGACATTTCTATCAA......................................................................................................................................................2611.001.00--------------------------1.00----------
......................................................................................................................................................TATCTGTAAACCTTCTGTCCAAGAA.................2511.001.00-----------------------------1.00-------
................................................................................................................................................TTCCAGTATCTGTAAACCTCT...........................211.000.00----1.00--------------------------------
...............................................................................................................................................................ACCTTCTGTCCAAGAATTT..............1911.001.00-------------------1.00-----------------
...................................................TAAGTTTCTTAGTAATGACTGGACTTTAGCAGCATGAAGCTTCTAGGTGTGTATGCATTGTGTTCTGAATGCCTGTGTGTTTATTTTGTAG..................................................9111.001.001.00------------------------------------
.......................................................................................................................................................ATCTGTAAACCTTCTGTCCAAGAATTTATC...........3011.001.00----------1.00--------------------------
....................CATTGGGAGACATTTCTATCAAAG....................................................................................................................................................2411.001.00---------1.00---------------------------
....................................................................................................................................................AGTATCTGTAAACCTTCTGTCCAAG...................2511.001.00-------1.00-----------------------------
..................................................GTAAGTTTCTTAGTAATGACTGGACTTTAGCAGCATGAAGCTTCTAGGTGTGTATGCATTGTGTTCTGAATGCCTGTGTGTTTATTTTGTAGA.................................................9311.001.00------------1.00------------------------
.............................................................................................................................................................................AATTTATCAAGAGAGATC.1820.500.50----------------------------------0.50--
.....................................................................................................................................................GTATCTGTAAACCTTCTG.........................1820.500.50---------------------------------0.50---
..........................................................................................................................................................TGTAAACCTTCTGTCC......................1620.500.50-----------------------------------0.50-
........................GGGAGACATTTCTATC........................................................................................................................................................1640.250.25------------------------------------0.25
.............................ACATTTCTATCAAAGA...................................................................................................................................................1680.120.12----0.12--------------------------------

Antisense strand
AGGCGGCTCTTACCCTCACTCATTGGGAGACATTTCTATCAAAGAAAGAAGTAAGTTTCTTAGTAATGACTGGACTTTAGCAGCATGAAGCTTCTAGGTGTGTATGCATTGTGTTCTGAATGCCTGTGTGTTTATTTTGTAGAGTTCCAGTATCTGTAAACCTTCTGTCCAAGAATTTATCAAGAGAGATCA
.......................................................................(((((((.((((.(((((((...(((((((....((.....)).....))))))).)).))))).))))))))))).............................................
..................................................51...............................................................................................148..........................................
SizePerfect hitTotal NormPerfect NormDRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR029130(GSM416759)
DLD2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR343334SRR037943(GSM510481)
293DcrTN. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR390723(GSM850202)
total small RNA. (cell line)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040011(GSM532896)
G529T. (cervix)		SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		TAX577744(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR029125(GSM416754)
U2OS. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
............................................AAAGAAGTAAGTTTCTTATA................................................................................................................................ 2035.330.00--4.00--------0.33--1.00----------------------
............................................AAAGAAGTAAGTTTCTTAT................................................................................................................................. 1932.000.00--2.00----------------------------------
..................................................................................CACCTAGAAGCTTCATGC............................................................................................ 1811.001.00------------------1.00------------------
.............................................................................TAGCAGCATGAAGCTCTGG................................................................................................ 191.000.00----------------1.00--------------------
................................................................................................................GTTCTGAATGCCTGTGTCC............................................................. 191.000.00---1.00---------------------------------
............................................AAAGAAGTAAGTTTCTTATAAG.............................................................................................................................. 2231.000.00--1.00----------------------------------
............................................TAAGAAACTTACTTCTTT.................................................................................................................................. 1830.670.67-----------0.67-------------------------
.............................................TAAGAAACTTACTTCTT.................................................................................................................................. 1740.250.25-----------0.25-------------------------
..............................................TAAGAAACTTACTTCT.................................................................................................................................. 1680.120.12-----------0.12-------------------------