ID: uc002cwk.2_intron_3_0_chr16_4491577_f.3p
GENE: (4)
chr16:4492069-4492318+


(2)
AGO2.ip 		(1)
B-CELL 		(2)
BRAIN 		(2)
BREAST 		(13)
CELL-LINE 		(1)
FIBROBLAST 		(7)
HEART 		(2)
HELA 		(4)
OTHER 		(10)
SKIN 		(1)
XRN.ip

Sense strand
TTATCTCTTAAAAATCCCAAAGAGTAGGGCAGAATTCGTTCAGTGAGTCCTACCTATGCTTACTTGGCAGAGTGCAAGTAAGTACAGTGGTGAAAGAGTGACTGAAAATGTGGGCCAGTACCCTCCTTTCCCTTTAGAGCCGAGCGTCAGTTTTGGTCGTTGCAAACAAAAGTTGACAGGCTGTCCCTTGGTTTCTTTAGTACTTCATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGA
...................................................................................................................................((..(((((((((...(((((...((((..((........)))))).)))))...))))))).))..))..................................................
.................................................................................................................................130...................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343334GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR189786SRR189782GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189787SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359204(GSM359204)
HepG2_nucl_low. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
......................................................................................................................................TAGAGCCGAGCGTCAGTTTTGGT.............................................................................................23115.0015.00-4.00------2.002.002.00--1.00-1.00---------1.00------1.00---1.00-----
......................................................................................................................................TAGAGCCGAGCGTCAGTTTTGG..............................................................................................2217.007.00-2.00---------1.001.00----------1.00----1.00---------1.00---
.....................................................................................................................................TTAGAGCCGAGCGTCAGTTTTGG..............................................................................................2314.004.00------2.00----1.00-------------------1.00----------
.......................................................................................................................................................................................................................ACATTCAATCAAGCTGCAAAG..............2114.004.003.00--1.00--------------------------------------
......................................................................................................................................TAGAGCCGAGCGTCAGTTTTGGTC............................................................................................2414.004.00----1.00-----------1.00-----------------1.00------1.00
......................................................................................................................................TAGAGCCGAGCGTCAGTTTTG...............................................................................................2112.002.00---2.00--------------------------------------
......................................................................................................................................TAGAGCCGAGCGTCAGTTTTGGTCTTT.........................................................................................2712.004.00-------2.00----------------------------------
.....................................................................................................................................TTAGAGCCGAGCGTCAGTTTCGGT.............................................................................................242.000.00--2.00---------------------------------------
...............................................................................................................................................................................ACAGGCTGTCCCTTGGTTTCTT.....................................................2212.002.00-----2.00------------------------------------
.....................................................................................................................................TTAGAGCCGAGCGTCAGTTTTGGT.............................................................................................2411.001.00---------------------------------------1.00--
.............................................................................................................................................................................................GGTTTCTTTAGTACTCTG...........................................181.000.00-----------------------------------1.00------
...........................................................................................................................................CCGAGCGTCAGTTTTG...............................................................................................1611.001.00----------------------------------------1.00-
......................................................................................................................................TAGAGCCGAGCGTCAGTTTTGGTCGT..........................................................................................2611.001.00------------------------------1.00-----------
.....................................................................................................................................TTAGAGCCGAGCGTCAGTTTTGGTCG...........................................................................................2611.001.00----1.00-------------------------------------
.................................................................................................................................................................................AGGCTGTCCCTTGGTTC........................................................171.000.00-----------------------------1.00------------
.......................................................................................................................................................................................................................ACATTCAATCAAGCTGCAAAGA.............2211.004.001.00-----------------------------------------
................................................................................................................GGCCAGTACCCTCCTAAA........................................................................................................................181.000.00---------------------------1.00--------------
.....................................................................................................................................TTAGAGCCGAGCGTCAGTTGGTC..............................................................................................231.000.00--1.00---------------------------------------
.....................................................................................................................................TTAGAGCCGAGCGTCAGTTGGAC..............................................................................................231.000.00--1.00---------------------------------------
.....................................................................................................................................TTAGAGCCGAGCGTCAGTTTTG...............................................................................................2211.001.00------------1.00-----------------------------
...............................................................................................................................................................................ACAGGCTGTCCCTTGGTTT........................................................1911.001.00--------------------1.00---------------------
...............................................................................................................................................................................ACAGGCTGTCCCTTGGTTTCTTTA...................................................2411.001.00---------------------1.00--------------------
...............................................................................................................................................................................ACAGGCTGTCCCTTGGTTTCTTT....................................................2311.001.00-----------------1.00------------------------
................................................................................................................................................................................................................GGAGTTGACATTCAATCAAGCTGCAAAGGGGGT.........3311.001.00--------------1.00---------------------------
.....................................................................................................................................TTAGAGCCGAGCGTCAGTTTTGGTT............................................................................................2511.001.00-------------------1.00----------------------
.....................................................................................................................................TTAGAGCCGAGCGTCAGTTTTTGT.............................................................................................241.000.00------------------1.00-----------------------
......................................................................AGTGCAAGTAAGTACTAGG.................................................................................................................................................................191.000.00--------------------------1.00---------------
.....................................................................................................................................TTAGAGCCGAGCGTCAGTTTTC...............................................................................................221.000.00---1.00--------------------------------------
...............................................................................................................................................................................ACAGGCTGTCCCTTGGTTTCTTTAG..................................................2511.001.00--1.00---------------------------------------

Antisense strand
TTATCTCTTAAAAATCCCAAAGAGTAGGGCAGAATTCGTTCAGTGAGTCCTACCTATGCTTACTTGGCAGAGTGCAAGTAAGTACAGTGGTGAAAGAGTGACTGAAAATGTGGGCCAGTACCCTCCTTTCCCTTTAGAGCCGAGCGTCAGTTTTGGTCGTTGCAAACAAAAGTTGACAGGCTGTCCCTTGGTTTCTTTAGTACTTCATGGAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGA
...................................................................................................................................((..(((((((((...(((((...((((..((........)))))).)))))...))))))).))..))..................................................
.................................................................................................................................130...................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR343334GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR189786SRR189782GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029124(GSM416753)
HeLa. (hela)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR189787SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359204(GSM359204)
HepG2_nucl_low. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
....................................................................AGAGTGCAAGTAAGTTCAG................................................................................................................................................................... 192.000.002.00-----------------------------------------
................................................................................................................GGCCAGTACCCTCCTAAA........................................................................................................................ 181.000.00-------------------------------------1.00----
........................................................................................................................................GAGCCGAGCGTCAGTTTCTTT............................................................................................. 211.000.00----------------------1.00-------------------
.......................................AGCATAGGTAGGACTCACTGA.............................................................................................................................................................................................. 2111.001.00------------------------1.00-----------------
...............................................................................................................GGGCCAGTACCCTCCTCAA........................................................................................................................ 191.000.00---------------------------------1.00--------
.............................ACTGAACGAATTCTG.............................................................................................................................................................................................................. 1540.250.25-------------0.25----------------------------