ID: uc002cqz.1_intron_5_0_chr16_2684641_r.3p
GENE: PDPK1(3)
chr16:2684591-2684840-


(5)
B-CELL 		(3)
BRAIN 		(11)
BREAST 		(37)
CELL-LINE 		(1)
CERVIX 		(2)
FIBROBLAST 		(2)
HEART 		(3)
HELA 		(1)
KIDNEY 		(6)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(33)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CACATGAGCCAGGCGTGGTAGCGCGTACCTACGTTCCCAGCCACTTGGGTTGGTTAAGGTGGGAGGATCGCTTGAGCCAGGGAGGTTGAGGCTGCAGTGAGCTATGATTGTGCCCCTGCACTCCAGTCTGGGCAACGGAGTAAACCTGCTCCAAAACGAAACAAGAGATTTTTACACTTCCTTAACTGCACGATATTCAGATTTCGGCCTTAGTTATGCCAAAAATGGAGAACTACTTAAATATATTCGC
..............................................................................(((((((((.((((((.((((.((.........)).....)))).)))))).)))...((((((....))))))........................))))))....................................................................
............................................................................77.........................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
.................................................................................................................................................................................TTCCTTAACTGCACGATATTCAGA.................................................24227.0027.00-9.50--0.502.00-0.50-1.00--0.50---0.50--0.50--1.00---0.50-----0.50--------0.500.50---------0.50--0.50---0.50-0.50----0.500.50-0.50-0.50-----0.50--------0.500.500.50--0.50--0.50--------0.500.500.500.50---
................................................................................................................................................................................CTTCCTTAACTGCACGATATTCAGA.................................................25219.5019.50-5.50----1.00------------0.50-----0.50--1.00--0.500.50-1.00-0.50-----0.50---0.50--1.00--0.50---0.500.50----0.50-----0.50---0.50-----0.50-----0.50-----0.50----0.50---0.500.500.50--------
................................................................................................................................................................................CTTCCTTAACTGCACGATATTCAG..................................................24212.0012.00-0.50---0.50-2.00----0.50-----1.50-0.50-0.50--0.500.500.50---0.50----0.50----0.50-----------------------0.50----0.50-----0.50---0.50--0.50-0.50------------------------
.................................................................................................................................................................................TTCCTTAACTGCACGATATTCAG..................................................2325.005.00-0.50-----------------0.50---------------1.00------------------------0.50------------0.50--------0.50---------0.50---0.50-----0.50-------
................................................................................................................................................................................CTTCCTTAACTGCACGATATTCAGAA................................................2624.0019.50------1.00-----------------------1.00-------------1.00--------1.00--------------------------------------------------------
.................................................................................................................................................................................TTCCTTAACTGCACGATATTCAGAA................................................2522.0027.00-1.00----1.00-------------------------------------------------------------------------------------------------------
.................................................................................GAGGTTGAGGCTGCAGTGGGGA...................................................................................................................................................221.000.00-------------------------------------------1.00------------------------------------------------------------------
................................................................................................................................................................................CTTCCTTAACTGCACGATATTCAGC.................................................2521.0012.00---------------------------------------1.00----------------------------------------------------------------------
...........................................................................................................TTGTGCCCCTGCACTCCAGTCCGGG......................................................................................................................251.000.00--1.00-----------------------------------------------------------------------------------------------------------
........................................................................................AGGCTGCAGTGAGCTATGAATAG...........................................................................................................................................231.000.00------------1.00-------------------------------------------------------------------------------------------------
...............................................................AGGATCGCTTGAGCCAGTAG.......................................................................................................................................................................201.000.00------------------------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GCCAAAAATGGAGAACTACT.............2021.001.00--------------1.00-----------------------------------------------------------------------------------------------
................................................................................................................................................................................CTTCCTTAACTGCACGATATTCAGAAC...............................................2721.0019.50------------------------------------------------1.00-------------------------------------------------------------
...............................................................AGGATCGCTTGAGCCAGGGAGTGCG..................................................................................................................................................................251.000.00--1.00-----------------------------------------------------------------------------------------------------------
........................................................AGGTGGGAGGATCGCTTGAC..............................................................................................................................................................................201.000.00-----------------------------------------------1.00--------------------------------------------------------------
..........................................................GTGGGAGGATCGCTTGACGG............................................................................................................................................................................201.000.00-----------------1.00--------------------------------------------------------------------------------------------
..........................................................................AGCCAGGGAGGTTGAGGCTGTAGC........................................................................................................................................................241.000.00--1.00-----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCTTAACTGCACGATATTCA...................................................2221.001.00-0.50-------0.50----------------------------------------------------------------------------------------------------
...............................................................AGGATCGCTTGAGCCAGGGACA.....................................................................................................................................................................221.000.00---------------------------------------------1.00----------------------------------------------------------------
....................................................................................GTTGAGGCTGCAGTGAGCTATG................................................................................................................................................2201.001.00-------------1.00------------------------------------------------------------------------------------------------
........................................................................TGAGCCAGGGAGGTTGAGGCTGCAGCGG......................................................................................................................................................281.000.00--1.00-----------------------------------------------------------------------------------------------------------
.............................................................GGAGGATCGCTTGAGCCA...........................................................................................................................................................................1801.001.00-----------1.00--------------------------------------------------------------------------------------------------
..........................................................................AGCCAGGGAGGTTGAGGCTGCAGGGG......................................................................................................................................................261.000.00--1.00-----------------------------------------------------------------------------------------------------------
..........................................................................AGCCAGGGAGGTTGAGGCTGCAGTGACCCA..................................................................................................................................................301.000.001.00-------------------------------------------------------------------------------------------------------------
........................................................................TGAGCCAGGGAGGTTGAGGCGCAG..........................................................................................................................................................241.000.001.00-------------------------------------------------------------------------------------------------------------
..................................................................ATCGCTTGAGCCAGGG........................................................................................................................................................................1601.001.00-------------1.00------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CCTTAACTGCACGATATTCAGA.................................................2220.500.50-0.50------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................ATGCCAAAAATGGAGAACTACTTAAATA.......2820.500.50---------------------0.50----------------------------------------------------------------------------------------
........................................................................................................................................................................TTTTTACACTTCCTTAACTGCACGATATTCAGA.................................................3320.500.50------------------------------------------------------0.50-------------------------------------------------------
.........................................................................................................................................................................................................................GCCAAAAATGGAGAACTACTTAAATAT......2720.500.50---0.50----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................ACTTCCTTAACTGCACGATATTCAG..................................................2520.500.50----------------------------------------------------------0.50---------------------------------------------------
.................................................................................................................................................................................TTCCTTAACTGCACGATATT.....................................................2020.500.50---------------------------------------------------------------0.50----------------------------------------------
...........................................................................................................................................................................TTACACTTCCTTAACTGCACGATATTCAG..................................................2920.500.50---------0.50----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TGGAGAACTACTTAAATA.......1820.500.50---0.50----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TCCAAAACGAAACAAGAGATTTTTACA..........................................................................2720.500.50---0.50----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................ACTTCCTTAACTGCACGATATTCA...................................................2420.500.50--------------------------------------------------------------------------0.50-----------------------------------
......................................................................................................................................................................................................................TATGCCAAAAATGGAGAACTACTTAAATA.......2920.500.50---0.50----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................TTTTACACTTCCTTAACTGCACGATATTCAG..................................................3120.500.50----------------------------------------------0.50---------------------------------------------------------------
............................................................................................................................................................................................................................AAAAATGGAGAACTACTTAA..........2020.500.50---------------------------------------------------------------------------------0.50----------------------------
......................................................................................................................................................................................................................TATGCCAAAAATGGAGAACTACTTAA..........2620.500.50---0.50----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCTTAACTGCACGATATTCAGAT................................................2520.500.50---------------------------------------------------------------------------0.50----------------------------------
...............................................................................................................................................................................ACTTCCTTAACTGCACGATATTC....................................................2320.500.50----------------------------------------------------------------0.50---------------------------------------------
.....................................................................................................................................................................................................................TTATGCCAAAAATGGAGA...................1830.330.33------------------------------------------------------------------------------------------------------------0.33-
........................................................................................................TGATTGTGCCCCTGCACTCCAGTCTGGGC.....................................................................................................................2940.250.25---0.25----------------------------------------------------------------------------------------------------------

Antisense strand
CACATGAGCCAGGCGTGGTAGCGCGTACCTACGTTCCCAGCCACTTGGGTTGGTTAAGGTGGGAGGATCGCTTGAGCCAGGGAGGTTGAGGCTGCAGTGAGCTATGATTGTGCCCCTGCACTCCAGTCTGGGCAACGGAGTAAACCTGCTCCAAAACGAAACAAGAGATTTTTACACTTCCTTAACTGCACGATATTCAGATTTCGGCCTTAGTTATGCCAAAAATGGAGAACTACTTAAATATATTCGC
..............................................................................(((((((((.((((((.((((.((.........)).....)))).)))))).)))...((((((....))))))........................))))))....................................................................
............................................................................77.........................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038854(GSM458537)
MM653. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038859(GSM458542)
MM386. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191448(GSM715558)
143genomic small RNA (size selected RNA from . (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
...............................................................................................................................................................................ACTTCCTTAACTGCACGATATTCAGATTTCGGCCTTAGTTATGCCAAAAATGGAGAACTACTTAAATATT..... 704.000.00----4.00---------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................ATTTTTACACTTCCTTAACTGCACGATATTCAGATTTCGGCCTTAGTTTTTT............................... 523.000.00----3.00---------------------------------------------------------------------------------------------------------
.........................................................................................GGCTGCAGTGAGCTATGATGACC.......................................................................................................................................... 233.000.003.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TATTTAAGTAGTTCTCCATTTTTGGCATAACTAAGGCCGAAATCTGAATATCGTGCAGTTAAGG....... 6422.502.50--------2.50-----------------------------------------------------------------------------------------------------
....TGAGCCAGGCGTGGTGTAG................................................................................................................................................................................................................................... 192.000.002.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................CCCTGCACTCCAGTCTGGGCACAC................................................................................................................. 242.000.00--2.00-----------------------------------------------------------------------------------------------------------
.................................................................................................................CCCTGCACTCCAGTCTGGGCAACGGACACG........................................................................................................... 301.000.001.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................GTGCCCCTGCACTCCAGTCACC....................................................................................................................... 221.000.00--1.00-----------------------------------------------------------------------------------------------------------
.................................................................................................................CCCTGCACTCCAGTCTGGCCG.................................................................................................................... 211.000.00-----------------------1.00--------------------------------------------------------------------------------------
................................................................................................................CCCCTGCACTCCAGTCTGGGCAAGTG................................................................................................................ 261.000.001.00-------------------------------------------------------------------------------------------------------------
............................................................................................................TGTGCCCCTGCACTCCATAGT......................................................................................................................... 211.000.00----------1.00---------------------------------------------------------------------------------------------------
................................................................................................................CCCCTGCACTCCAGTCTGGGCAAG.................................................................................................................. 241.000.001.00-------------------------------------------------------------------------------------------------------------
..............................................................................................................................TCTGGGCAACGGAGTAGTGC........................................................................................................ 201.000.00--1.00-----------------------------------------------------------------------------------------------------------
.................................................................................................................CCCTGCACTCCAGTCTGGGCAACGGAACG............................................................................................................ 291.000.00--1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................TGAATATCGTGCAGTTAAGGAAGTG................................................... 2521.001.00---1.00----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TCCAAAACGAAACAAGAA................................................................................... 181.000.00---------------------------------------------------1.00----------------------------------------------------------
................................GTTCCCAGCCACTTGTCTG....................................................................................................................................................................................................... 191.000.00--------------------1.00-----------------------------------------------------------------------------------------
.................................................................................................................CCCTGCACTCCAGTCTGGGCAACAC................................................................................................................ 251.000.001.00-------------------------------------------------------------------------------------------------------------
.....................................................................................................................GCACTCCAGTCTGGGCACGCG................................................................................................................ 211.000.001.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................GAGAACTACTTAAATATTTTT.. 211.000.001.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................CTGCACTCCAGTCTGGGCAACGGAGTCGGC......................................................................................................... 301.000.001.00-------------------------------------------------------------------------------------------------------------
.ACATGAGCCAGGCGTGGTTTG.................................................................................................................................................................................................................................... 211.000.00--1.00-----------------------------------------------------------------------------------------------------------
..................................................................ATCGCTTGAGCCAGGGAGGTTGGCC............................................................................................................................................................... 251.000.001.00-------------------------------------------------------------------------------------------------------------
..............................................................................................................................................AACCTGCTCCAAAACGAT.......................................................................................... 181.000.00-----------------------------1.00--------------------------------------------------------------------------------
...................................................................................................AGCTATGATTGTGCCAAGA.................................................................................................................................... 191.000.00--------------1.00-----------------------------------------------------------------------------------------------
...ATGAGCCAGGCGTGGTATTG................................................................................................................................................................................................................................... 201.000.00--1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................TGCCCCTGCACTCCAGTCTAAA...................................................................................................................... 221.000.00-1.00------------------------------------------------------------------------------------------------------------
..................................................................................................................CCTGCACTCCAGTCTGGGCATGCG................................................................................................................ 241.000.001.00-------------------------------------------------------------------------------------------------------------
................................................................................................................CCCCTGCACTCCAGTCTGGGCAAGC................................................................................................................. 251.000.001.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................CCTGCACTCCAGTCTGGGCAAA.................................................................................................................. 221.000.00-------------------------------------1.00------------------------------------------------------------------------
....................AACCCAAGTGGCTGGGAACGTAGGTACGCGC....................................................................................................................................................................................................... 3121.001.00----------------1.00---------------------------------------------------------------------------------------------
.......................................................................................................................................................CAAAACGAAACAAGACC.................................................................................. 171.000.00---------------1.00----------------------------------------------------------------------------------------------
...................................................................................GGTTGAGGCTGCAGTGAGCTATAGGT............................................................................................................................................. 261.000.001.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................TTGTGCCCCTGCACTCCAGTAT......................................................................................................................... 221.000.00----------------------------------------1.00---------------------------------------------------------------------
.............................................................................................GCAGTGAGCTATGATTGCAC......................................................................................................................................... 201.000.00-----------1.00--------------------------------------------------------------------------------------------------
..CATGAGCCAGGCGTGGTGTTG................................................................................................................................................................................................................................... 211.000.00--1.00-----------------------------------------------------------------------------------------------------------
....TGAGCCAGGCGTGGTAGCGCGTACGT............................................................................................................................................................................................................................ 261.000.001.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................CTCCAGTCTGGGCAACGGAAGC............................................................................................................ 221.000.001.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................CACTCCAGTCTGGGCAACGGAG.............................................................................................................. 221.000.00---------------1.00----------------------------------------------------------------------------------------------
...................................................................................................................CTGCACTCCAGTCTGGGCAAAAG................................................................................................................ 231.000.00---------------------------------1.00----------------------------------------------------------------------------
.................................................................................................................CCCTGCACTCCAGTCTGGGCAC................................................................................................................... 221.000.00--1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................TTGTGCCCCTGCACTCCACAC.......................................................................................................................... 211.000.00----------1.00---------------------------------------------------------------------------------------------------
...................................................................................................................CTGCACTCCAGTCTGGAGCG................................................................................................................... 201.000.00-----1.00--------------------------------------------------------------------------------------------------------
............................................................................................................TCCGTTGCCCAGACTGGAGTGCAGGGGCACA............................................................................................................... 3121.001.001.00-------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................CAAAACGAAACAAGAGTC................................................................................. 181.000.001.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TATTTAAGTAGTTCTCCATTTTTGGCATAACT....... 3221.001.00---1.00----------------------------------------------------------------------------------------------------------
...............................................................................................................GCCCCTGCACTCCAGTCTGGGCAGCG................................................................................................................. 261.000.00--------------------------------------1.00-----------------------------------------------------------------------
..........................AAGTGGCTGGGAACGTAGGT............................................................................................................................................................................................................ 2021.001.00--------------------------------------------------1.00-----------------------------------------------------------
.................TGGGAACGTAGGTACGCGCTAC................................................................................................................................................................................................................... 2220.500.50---------------------0.50----------------------------------------------------------------------------------------
.........................................................................................................................................................................................TAAGGCCGAAATCTGAATATCGTGCAG...................................... 2720.500.50---------------------------------------------------------------------------------------------0.50----------------
.......................................................................................................................................................................................................................ATTTAAGTAGTTCTCCATTTTTGGCAT........ 2720.500.50---------------------0.50----------------------------------------------------------------------------------------
.............................................................................................................................................................................CTGAATATCGTGCAGTTAAGGAAGTGT.................................................. 2720.500.50---0.50----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................ACTAAGGCCGAAATCTGA.................................... 1820.500.50--------------------------------------------------------------------------------------------------0.50-----------
...........................................................................................................................................................................................................................AATATATTTAAGTAGTTCTCCATTTTTG... 2820.500.50---0.50----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................TGCAGTTAAGGAAGTGTAAAAATCTCTT............................................................ 2820.500.50---0.50----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................ATCTGAATATCGTGCAGTTAAGGA................................................ 2420.500.50-------------------------------------------------------------------------------0.50------------------------------
...........................................................................................................................................................................AATATCGTGCAGTTAAGGAAGTGTAA..................................................... 2620.500.50-------------------------------------------------------------------------------------------------0.50------------
.................................................................................................................................................................................TCTGAATATCGTGCAGTTAAGGAA................................................. 2420.500.50---0.50----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................GGCATAACTAAGGCCGAAATCTGAATAT.............................. 2820.500.50---0.50----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................TCTGAATATCGTGCAGTTAAGGAAGTGT................................................. 2820.500.50---0.50----------------------------------------------------------------------------------------------------------
...................AACCCAAGTGGCTGGGAACGTAGGTACGCGCT....................................................................................................................................................................................................... 3220.500.50-----------------------------------------------------------------------------------------0.50--------------------
..TACCACGCCTGGCTCATG...................................................................................................................................................................................................................................... 1820.500.50---------------------------0.50----------------------------------------------------------------------------------
..........................................................................................................................................................AGGAAGTGTAAAAATCTCTTGTTTCGTT.................................................................... 2820.500.50---0.50----------------------------------------------------------------------------------------------------------
..CAACCCAAGTGGCTGGGAACGTAGGTACGCGCTACCACGCCTGGCTCATG...................................................................................................................................................................................................... 5020.500.50-----------------------------------------------------------------------------------------------------------0.50--
...................CCCAAGTGGCTGGGAACGTAGGTACGCGCT......................................................................................................................................................................................................... 3020.500.50-----0.50--------------------------------------------------------------------------------------------------------
...................................................................................................................................................CTCTTGTTTCGTTTTGGAGC................................................................................... 2020.500.50---0.50----------------------------------------------------------------------------------------------------------
............................................................................................................................................................................TGAATATCGTGCAGTTAAGGAAGTGTA................................................... 2720.500.50---0.50----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ATCTGAATATCGTGCAGTTAAGG................................................ 2320.500.50-----0.50--------------------------------------------------------------------------------------------------------
......................CCCAAGTGGCTGGGAACGTAGGTACGC......................................................................................................................................................................................................... 2720.500.50---0.50----------------------------------------------------------------------------------------------------------
...................TGGGAACGTAGGTACGCGCT................................................................................................................................................................................................................... 2020.500.50---0.50----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TGCAGTTAAGGAAGTGTAAAAATCTCT............................................................ 2720.500.50---0.50----------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................CTAAGGCCGAAATCTGAATATCGTGC..................................... 2620.500.50---0.50----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................AAATCTGAATATCGTGCA.............................................. 1820.500.50-----------------0.50--------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TAAGTAGTTCTCCATTTTTGGCA........... 2320.500.50---0.50----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................TCTGAATATCGTGCAGTTAAGGAAGT................................................. 2620.500.50---0.50----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................AAGGCCGAAATCTGAATATCGTGCAGTT....................................... 2820.500.50---0.50----------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................TAACTAAGGCCGAAATCTGAATATC.................................. 2520.500.50---0.50----------------------------------------------------------------------------------------------------------
...................................................................................................................TACTCCGTTGCCCAGACTGGAGTGCAG............................................................................................................ 2740.250.250.25-------------------------------------------------------------------------------------------------------------
...........................................................................TAGCTCACTGCAGCCTCAACCTCCCTGGC.................................................................................................................................................. 2990.220.220.22-------------------------------------------------------------------------------------------------------------
.........................................................AACCTCCCTGGCTCAAGCGATCCTCCCACC................................................................................................................................................................... 3050.200.200.20-------------------------------------------------------------------------------------------------------------
.............................................................................................................TGCCCAGACTGGAGTGCAGGGGCAC.................................................................................................................... 2550.200.20-------------------------------------------------------------------------------------------------------------0.20
..............................................................................................................TGCCCAGACTGGAGTGCAGGGGCA.................................................................................................................... 2490.110.110.11-------------------------------------------------------------------------------------------------------------