| (1) AGO1.ip | (4) AGO2.ip | (2) B-CELL | (1) BRAIN | (6) BREAST | (14) CELL-LINE | (2) CERVIX | (1) HELA | (2) OTHER | (14) SKIN | (1) XRN.ip |
| GGCCCTCACAGACAATGGGAGACACATCACCTACTTGGAGGAAGAGCTGGGTGGGTGCCACCTTGGGTTGGAGGTTTCTCTGGCCTTGACGATCAAGTGTAACCTGGATGGGAAGGACCTGGGGCTGGGGAGGGGCTGCCGTTCTCAGGGATGGCCTGCAGCGGGTATGCCCACCCTGCTTCATGCACCTGGGCTCACCTGCGTGGCCGGAGTGCCCCTGAGGCACGTGTTAAAAATGCAGAGTCCTGGC ............................................................(((((((.(((.(((..(((..((((((.....)))).))..(((((.((((.....))))...))))))))..))).)))..))))))).................................................................................................... .........................................................58...........................................................................................151................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | GSM956925Ago2D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR343337 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | GSM359173(GSM359173) hela_10_1. (hela) | SRR033718(GSM497063) Multiple Myeloma (U266). (B cell) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR191421(GSM715531) 122genomic small RNA (size selected RNA from . (breast) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR040037(GSM532922) G243T. (cervix) | SRR189787 | SRR343332(GSM796035) "KSHV (HHV8), EBV (HHV-4)". (cell line) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR191630(GSM715740) 70genomic small RNA (size selected RNA from t. (breast) | SRR033710(GSM497055) GCB DLBCL (GCB385). (B cell) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR191467(GSM715577) 115genomic small RNA (size selected RNA from . (breast) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR040007(GSM532892) G601T. (cervix) | GSM956925F181A(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | SRR191594(GSM715704) 70genomic small RNA (size selected RNA from t. (breast) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | GSM956925AGO2Paz8(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | GSM956925Paz8D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | SRR191622(GSM715732) 175genomic small RNA (size selected RNA from . (breast) | SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................GAGGGGCTGCCGTTCTGC....................................................................................................... | 18 | 27.00 | 0.00 | 7.00 | 2.00 | 6.00 | - | 2.00 | - | 1.00 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | |
| ..................................................................................................................................AGGGGCTGCCGTTCTGC....................................................................................................... | 17 | 8.00 | 0.00 | - | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................AGGGGCTGCCGTTCTGCC...................................................................................................... | 18 | 7.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | |
| .................................................................................................................................GAGGGGCTGCCGTTCTG........................................................................................................ | 17 | 6.00 | 0.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................AGGGGCTGCCGTTCTG........................................................................................................ | 16 | 5.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | |
| .................................................................................................................................GAGGGGCTGCCGTTCTGCCT..................................................................................................... | 20 | 4.00 | 0.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................AGGGGCTGCCGTTCTGCCT..................................................................................................... | 19 | 3.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................GAGGGGCTGCCGTTCTGCC...................................................................................................... | 19 | 3.00 | 0.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................TTGGGTTGGAGGTTTCTCTGGC...................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........ACAATGGGAGACACATCACCTACCCG..................................................................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................AGTGCCCCTGAGGCACCG...................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................AGGAAGAGCTGGGTGGACT................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .......................ACATCACCTACTTGGAGGAAGAGCTG......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................AGGGGCTGCCGTTCTGTA...................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................GAGGGGCTGCCGTTC.......................................................................................................... | 15 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| GGCCCTCACAGACAATGGGAGACACATCACCTACTTGGAGGAAGAGCTGGGTGGGTGCCACCTTGGGTTGGAGGTTTCTCTGGCCTTGACGATCAAGTGTAACCTGGATGGGAAGGACCTGGGGCTGGGGAGGGGCTGCCGTTCTCAGGGATGGCCTGCAGCGGGTATGCCCACCCTGCTTCATGCACCTGGGCTCACCTGCGTGGCCGGAGTGCCCCTGAGGCACGTGTTAAAAATGCAGAGTCCTGGC ............................................................(((((((.(((.(((..(((..((((((.....)))).))..(((((.((((.....))))...))))))))..))).)))..))))))).................................................................................................... .........................................................58...........................................................................................151................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | GSM956925Ago2D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR207113(GSM721075) IP against AGO 1 & 2. (ago1/2 cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR343337 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR444061(SRX128909) Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin) | GSM359173(GSM359173) hela_10_1. (hela) | SRR033718(GSM497063) Multiple Myeloma (U266). (B cell) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR330879(SRX091717) tissue: skin psoriatic involveddisease state:. (skin) | SRR191421(GSM715531) 122genomic small RNA (size selected RNA from . (breast) | SRR330907(SRX091745) tissue: normal skindisease state: normal. (skin) | SRR040037(GSM532922) G243T. (cervix) | SRR189787 | SRR343332(GSM796035) "KSHV (HHV8), EBV (HHV-4)". (cell line) | SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR191630(GSM715740) 70genomic small RNA (size selected RNA from t. (breast) | SRR033710(GSM497055) GCB DLBCL (GCB385). (B cell) | DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | SRR191467(GSM715577) 115genomic small RNA (size selected RNA from . (breast) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR040007(GSM532892) G601T. (cervix) | GSM956925F181A(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | SRR191594(GSM715704) 70genomic small RNA (size selected RNA from t. (breast) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | GSM956925AGO2Paz8(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line) | GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | GSM956925Paz8D5(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (cell line) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | SRR191622(GSM715732) 175genomic small RNA (size selected RNA from . (breast) | SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................ACCTGGGGCTGGGGAGGGT................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ...............................................................................................................................................................................................GGCTCACCTGCGTGGATCC........................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................GCCCACCCTGCTTCATTG................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................AGGTTTCTCTGGCCTGGCT................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................CCTGCTTCATGCACCAAGG......................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................GGCTCACCTGCGTGGA........................................... | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |