ID: uc002cld.1_intron_0_0_chr16_1359421_f.5p
GENE: (1)
chr16:1359371-1359620+


(5)
AGO2.ip
(5)
B-CELL
(18)
BREAST
(20)
CELL-LINE
(12)
CERVIX
(2)
HEART
(2)
HELA
(3)
LIVER
(2)
OTHER
(58)
SKIN

Sense strand
GGGAGTTTACAGACGCTCCCTCACATCGGGGACGCGGCTCCTTTAAGGGCGTAGGTGTCCAGGGCGCCGCCTGACTGGAAAGTCGCCCCCCGGCCGGGCTCCTGGGGCGGACCCGGGGCGCGGGCGCGCGGCGGCGGGGCGCGGGCAACGGGGAGCGCTCGGCGGCGCGGGAGGCGCTCGGGGCCGGGCGGCAGGAGCGGCGCGCGAGGCAGGCGTGCAGAGGGCAGCCCCGCGTTAGGCCCCGCCCCGC
..................................................................................((((.(((((.(((.((.((((((.....)))))))).))).(((...))).))))).))))..........................................................................................................
..............................................................................79................................................................145.......................................................................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925PAZD5TAX577744(Rovira)
total RNA. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
TAX577738(Rovira)
total RNA. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040041(GSM532926)
G612T. (cervix)
GSM532889(GSM532889)
G576N. (cervix)
SRR040030(GSM532915)
G013N. (cervix)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR189783SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
GSM532875(GSM532875)
G547N. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577740(Rovira)
total RNA. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
GSM532890(GSM532890)
G576T. (cervix)
TAX577579(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
..........................................................................................................................GGCGCGCGGCGGCGGTGGC.............................................................................................................19043.0019.005.00---3.001.002.002.002.00-2.002.00--2.00--2.00-1.002.00--1.00-----2.001.001.00--2.002.00-------1.00------1.00--1.00------1.001.00-----------1.00----1.00----------------------1.00-----------------------
..........................................................................................................................GGCGCGCGGCGGCGGTGG..............................................................................................................18039.0019.001.00---2.003.00-2.003.00-2.002.00-3.002.00-2.001.002.00-1.003.00-----1.00----1.00--------1.00----1.001.00-------1.001.00--1.00--------1.00---------------------------1.00----------------------------
..........................................................................................................................GGCGCGCGGCGGCGG.................................................................................................................15019.0019.00---7.00------------------3.00-2.003.002.00-------------------------------------------------1.00------------1.00-----------------------------------
...............................................................................................................................GCGGCGGCGGGGCGCCGCG........................................................................................................1910.000.00-7.003.00--------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................GCGGCGGGGCGCGGGTCA......................................................................................................1807.003.00---------4.00-----------------------------------2.00-----------------------------------------------1.00-------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGTGGT.............................................................................................................1905.0019.00----3.00-1.00-------------------------------1.00--------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGG...............................................................................................................1743.753.751.000.500.75--0.25----------------------------------------------------------------------------------------------------0.25------0.250.250.25-0.25-------
............................................................................................................................CGCGCGGCGGCGGGGCGCGGG.........................................................................................................2113.003.00------2.00-----------------------------------------------1.00----------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGACG..............................................................................................................1803.0019.003.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAGGG.............................................................................................................1903.0019.002.00--------------------------------------------------------------------------------------------------1.00-------------------------
..................................................................................................................................GCGGCGGGGCGCGGG.........................................................................................................1503.003.00---2.00-----------------------------------------------------------------------------------1.00-------------------------------------
...................................................................................CGCCCCCCGGCCGGGCGCG....................................................................................................................................................193.000.00-3.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGTGGG.............................................................................................................1902.0019.001.00------------------------------------------------------------------------------1.00---------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGGCG.............................................................................................................1912.002.00------------------------------------------------------------------1.00--1.00-------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGACT..............................................................................................................1802.0019.001.00---------------------------------------------------------------1.00------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAC...............................................................................................................1702.0019.002.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGGCGGGC..........................................................................................................2212.002.00--1.00-------------------------------------------------1.00------------------------------------------------------------------------
............................................................................................................................CGCGCGGCGGCGGGGCGG............................................................................................................1812.001.00-----------------------1.00------1.00----------------------------------------------------------------------------------------------
..................................................................................................................................GCGGCGGGGCGCGGGTC.......................................................................................................1702.003.00---------1.00--------------------------------------------------------------------------------1.00----------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAGTG.............................................................................................................1902.0019.002.00----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................CGCGCGGCGGCGGGGC..............................................................................................................1621.501.50----------------1.00-0.50----------------------------------------------------------------------------------------------------------
..................................................................................................................................GCGGCGGGGCGCGGGCAA......................................................................................................1811.001.00----------------------------------------------------------------------------------------1.00------------------------------------
............................................................................................................................CGCGCGGCGGCGGGGACT............................................................................................................181.000.00--------------------------------------------------------------------------1.00--------------------------------------------------
..............................................................................................................................CGCGGCGGCGGGGCGCGGGG........................................................................................................201.000.00------------1.00----------------------------------------------------------------------------------------------------------------
.................................................................................................................................GGCGGCGGGGCGCGGCGG.......................................................................................................1801.001.00-----------------------------------------------------------------------1.00-----------------------------------------------------
............................................................................................................................CGCGCGGCGGCGGGGTGGC...........................................................................................................191.000.00-------------1.00---------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAGGT.............................................................................................................1901.0019.00---------------------------1.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................CAGGCGTGCAGAGGGCTG.......................181.000.00-----------------------------------------------------------------------------------1.00-----------------------------------------
................................................................................................................................CGGCGGCGGGGCGCGGCGGG......................................................................................................201.000.00-----1.00-----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGGCGGGGG.........................................................................................................2311.002.00-1.00---------------------------------------------------------------------------------------------------------------------------
..........................................TTAAGGGCGTAGGTGTCCAGGGCGCCGCCGAC................................................................................................................................................................................321.000.00-------------------------------------------------------------------------------------1.00---------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAGA..............................................................................................................1801.0019.001.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAGC..............................................................................................................1801.0019.001.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................GCGGGGCGCGGGCAA......................................................................................................1521.001.00---------1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................CCCGGGGCGCGGGCGACTG........................................................................................................................191.000.00-------------------------------------------------------------------------------------------1.00---------------------------------
....................................................................................................................................GGCGGGGCGCGGGCAATGTG..................................................................................................201.000.00--------------------------------------------------------------------------------------------1.00--------------------------------
...............................................................................................................................GCGGCGGCGGGGCGCCGGG........................................................................................................191.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................GGCGGCGGGGCGCGGGCCCCG....................................................................................................211.000.00--------------------------------------------1.00--------------------------------------------------------------------------------
...............................................................................................................CCCGGGGCGCGGGCGTC..........................................................................................................................171.000.00----------------------------------------------------------------------------------------------------1.00------------------------
..........................................................................................................................GGCGCGCGGCGGCGGTGCA.............................................................................................................1901.0019.001.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................GCGGCGGCGGGGCGCCGG.........................................................................................................181.000.00-------------------------------------------------------------------------------------------------1.00---------------------------
..........................................................................................................................GGCGCGCGGCGGCGGTT...............................................................................................................1701.0019.00---------------------------------------------------------------------------1.00-------------------------------------------------
.........................................................................................................................................................................................GGGCGGCAGGAGCGGGTAG..............................................191.000.00---------------------------------------------------------------1.00-------------------------------------------------------------
............................................................................................................................CGCGCGGCGGCGGGGCGGG...........................................................................................................1911.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------
.........................................................................................CCGGCCGGGCTCCTGGGGCGG............................................................................................................................................2111.001.00----------------------------------------------------------------------------------1.00------------------------------------------
............................................................................................................................CGCGCGGCGGCGGGGT..............................................................................................................161.000.00------------------------------------------------------------------------1.00----------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGTGGA.............................................................................................................1901.0019.001.00----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................CGCGCGGCGGCGGGGCG.............................................................................................................1711.001.00-------------------------------------1.00---------------------------------------------------------------------------------------
.........................................................................................................................GGGCGCGCGGCGGCGGGGCGT............................................................................................................211.000.001.00----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................GCGCGCGGCGGCGGGGCGGCGG.........................................................................................................221.000.00-------1.00---------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGCGGACCCGGGGAA..................................................................................................................................181.000.00-------------------1.00---------------------------------------------------------------------------------------------------------
............................................................................................................................CGCGCGGCGGCGGGGCTGG...........................................................................................................1921.001.50-------------------------------1.00---------------------------------------------------------------------------------------------
...................................................................................CGCCCCCCGGCCGGGCG......................................................................................................................................................171.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAAA..............................................................................................................1801.0019.00---------------------------------------------------------------------------------1.00-------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGGC..............................................................................................................1811.001.001.00----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CGCTCGGGGCCGGGCGGCAGGAGCGGCGCG..............................................3011.001.00------------1.00----------------------------------------------------------------------------------------------------------------
.......................................................................................................................GCGGGCGCGCGGCGGCGGCCGG.............................................................................................................221.000.00------------1.00----------------------------------------------------------------------------------------------------------------
..................................................................................................................................GCGGCGGGGCGCGGGTTG......................................................................................................1801.003.00-----------------------------------------------------------------1.00-----------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGTCGC.............................................................................................................1901.0019.001.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................................CCTGGGGCGGACCCGCCTG...................................................................................................................................191.000.00----------------------------------------1.00------------------------------------------------------------------------------------
...................................................................................CGCCCCCCGGCCGGGGGCA....................................................................................................................................................191.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAGCA.............................................................................................................1901.0019.001.00----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................CGCGCGGCGGCGGGGCGA............................................................................................................1811.001.00------------------------------------------------1.00----------------------------------------------------------------------------
.................................................................................................................................GGCGGCGGGGCGCGG..........................................................................................................1501.001.00--------------------------------------------1.00--------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAGTA.............................................................................................................1901.0019.001.00----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................CGCGCGGCGGCGGGGCGGGGG.........................................................................................................2111.001.00----------1.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAGTC.............................................................................................................1901.0019.001.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGGCACGC..........................................................................................................2211.001.00------------1.00----------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGGCC.............................................................................................................1911.001.001.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAA...............................................................................................................1701.0019.00-------------------------------------1.00---------------------------------------------------------------------------------------
....................................................................................GCCCCCCGGCCGGGCCACC...................................................................................................................................................191.000.00-1.00---------------------------------------------------------------------------------------------------------------------------
......................................................................................................TGGGGCGGACCCGGGGG...................................................................................................................................171.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGAGCC.............................................................................................................1901.0019.001.00----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................GCGCGGCGGCGGGGCGGGGC.........................................................................................................201.000.00--------------------------------------1.00--------------------------------------------------------------------------------------
..............................................................................................................................CGCGGCGGCGGGGCGGCGG.........................................................................................................191.000.00------1.00----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGACA..............................................................................................................1801.0019.001.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGGCGGCGG.........................................................................................................2311.002.00-----------------------1.00-----------------------------------------------------------------------------------------------------
..................................................................................................................................GCGGCGGGGCGCGGGCAAGAGG..................................................................................................2211.001.00-------1.00---------------------------------------------------------------------------------------------------------------------
........................................................................................................................CGGGCGCGCGGCGGCGCTGA..............................................................................................................201.000.00--------------------------------------------------------------------------------------1.00--------------------------------------
....................................................................................................................GGCGCGGGCGCGCGGCGGCGGGCGGG............................................................................................................261.000.00------------1.00----------------------------------------------------------------------------------------------------------------
....................................................................................GCCCCCCGGCCGGGCG......................................................................................................................................................161.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CGCGGCGGCGGGGCGGAGG.........................................................................................................191.000.00-----------------------------------------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................................................CGGGGCCGGGCGGCAGGCGG....................................................201.000.00------------------------1.00----------------------------------------------------------------------------------------------------
...........................................................................................................................GCGCGCGGCGGCGGGG...............................................................................................................1660.830.83--0.50-------------------------------------------------------------------------------------------------------0.17-0.17----------------
................................................................................................................................CGGCGGCGGGGCGCGGG.........................................................................................................1790.670.67----------------------------------------------0.11--------------------------------------------------------0.44----------------0.11----
.....................................................................................................CTGGGGCGGACCCGGGG....................................................................................................................................1720.500.50---------------------------0.50-------------------------------------------------------------------------------------------------
..................................................................................................................GGGGCGCGGGCGCGCGGCGGCG..................................................................................................................2220.500.500.50----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................CGGGGCGCGGGCGCGCGGCGGC...................................................................................................................2220.500.50--------------------------0.50--------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGAGAA............................................................................................................2060.330.33----------------------------------------------------0.17---0.17--------------------------------------------------------------------
............................................................................................................................................GCGGGCAACGGGGAG...............................................................................................1530.330.33---------------------------------------------------------------------------------------------------------------0.33-------------
..........................................................................................................................GGCGCGCGGCGGCGGG................................................................................................................1660.330.33------------------------------------------------------------------------------------------------------------0.33----------------
............................................................................................................................................GCGGGCAACGGGGAGGGG............................................................................................1830.330.33---------------------------------------------------0.33-------------------------------------------------------------------------
..............................................................................................................................................................................CGCTCGGGGCCGGGC.............................................................1550.200.20----------------------------------------------------------------------------------------------------------------------0.20------
...........................................................................................................................GCGCGCGGCGGCGGGGACG............................................................................................................1960.170.83---------------------------------------------------------0.17-------------------------------------------------------------------
.................................................................................................................CGGGGCGCGGGCGCGCG........................................................................................................................1760.170.17----------0.17------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGCA..............................................................................................................1860.170.330.17----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGCC..............................................................................................................1860.170.330.17----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGACC.............................................................................................................1960.170.33----------------------------0.17------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGTGA.............................................................................................................1960.170.330.17----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGTGGC............................................................................................................2060.170.33----------------------------------------------0.17------------------------------------------------------------------------------
...............................................................................................................................GCGGCGGCGGGGCGCGGG.........................................................................................................1870.140.14-------------------0.14---------------------------------------------------------------------------------------------------------
.......................................................................................................GGGGCGGACCCGGGG....................................................................................................................................1590.110.11----------------------------------------------------------------------------------------------------------0.11------------------

Antisense strand
GGGAGTTTACAGACGCTCCCTCACATCGGGGACGCGGCTCCTTTAAGGGCGTAGGTGTCCAGGGCGCCGCCTGACTGGAAAGTCGCCCCCCGGCCGGGCTCCTGGGGCGGACCCGGGGCGCGGGCGCGCGGCGGCGGGGCGCGGGCAACGGGGAGCGCTCGGCGGCGCGGGAGGCGCTCGGGGCCGGGCGGCAGGAGCGGCGCGCGAGGCAGGCGTGCAGAGGGCAGCCCCGCGTTAGGCCCCGCCCCGC
..................................................................................((((.(((((.(((.((.((((((.....)))))))).))).(((...))).))))).))))..........................................................................................................
..............................................................................79................................................................145.......................................................................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925PAZD5TAX577744(Rovira)
total RNA. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189784SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
TAX577738(Rovira)
total RNA. (breast)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040041(GSM532926)
G612T. (cervix)
GSM532889(GSM532889)
G576N. (cervix)
SRR040030(GSM532915)
G013N. (cervix)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
TAX577588(Rovira)
total RNA. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR189783SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
GSM532875(GSM532875)
G547N. (cervix)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040012(GSM532897)
G648N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
TAX577740(Rovira)
total RNA. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
GSM532890(GSM532890)
G576T. (cervix)
TAX577579(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
.......................................................................................................GGGGCGGACCCGGGGCGGG................................................................................................................................ 19912.890.00-----0.220.110.111.00-0.560.89-0.670.44-0.560.220.780.110.220.22------0.220.330.330.330.220.220.22-0.110.110.11-------0.670.11--0.22-0.110.220.22---0.110.110.11----------------------------------1.00------0.33-0.110.33---0.22--0.22--------0.110.110.110.11
.............GTCCCCGATGTGAGGGAGCG......................................................................................................................................................................................................................... 2014.004.00---------------4.00-------------------------------------------------------------------------------------------------------------
..................................................................................CCCGGCCGGGGGGCGA........................................................................................................................................................ 1613.003.00--1.00-----------------------------------------------------------1.00---------------------1.00----------------------------------------
..................................................................................TCGCCCCCCGGCCGGTC....................................................................................................................................................... 172.000.00------------------------------------------2.00----------------------------------------------------------------------------------
..................................................................................TCGCCCCCCGGCCGGGACGC.................................................................................................................................................... 202.000.00---------------------------------2.00-------------------------------------------------------------------------------------------
....................................................................................................CCTGGGGCGGACCCGGGG.................................................................................................................................... 182.000.00--------------------------------1.00----------1.00---------------------------------------------------------------------------------
...............................................................................................GGGCTCCTGGGGCGGCGCG........................................................................................................................................ 192.000.00--1.00-------------------------1.00------------------------------------------------------------------------------------------------
..GAGCGTCTGTAAACTC........................................................................................................................................................................................................................................ 1612.002.00---------------------------------------2.00-------------------------------------------------------------------------------------
..........................................................................................................................GCCCCGCCGCCGCGCGCC.............................................................................................................. 1811.001.00-1.00---------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CGCGGGCGCGCGGCGA.................................................................................................................... 161.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................GGGCTCCTGGGGCGGAGA......................................................................................................................................... 181.000.00-------------------------------------------------1.00---------------------------------------------------------------------------
....................................................................................................CCTGGGGCGGACCCGGG..................................................................................................................................... 171.000.00-----------------------------------------------0.50-0.50---------------------------------------------------------------------------
.................................................................................GTCGCCCCCCGGCCGGGGC...................................................................................................................................................... 191.000.00------------------------------------1.00----------------------------------------------------------------------------------------
.................................................................................GTCGCCCCCCGGCCGAGG....................................................................................................................................................... 181.000.00---------------------------------------------------------1.00-------------------------------------------------------------------
.................................................................................GTCGCCCCCCGGCCGGGCCGC.................................................................................................................................................... 211.000.00--------------------------------------------------------------------------------1.00--------------------------------------------
.............................................................................................CCGGGCTCCTGGGGCTGAT.......................................................................................................................................... 191.000.00-------------------------------------------------------------------1.00---------------------------------------------------------
............................................................................................................................................................GCTCGGCGGCGCGGGAAA............................................................................ 181.000.00----------------------------------------------------------------------1.00------------------------------------------------------
..................................................................................TCGCCCCCCGGCCGGG........................................................................................................................................................ 161.000.00----------------------------------------------------------------------------------------------1.00------------------------------
.........................................................................................................................................GCGCCGCCGAGCGCTCCCCGTTGCCCGCGCC.................................................................................. 3111.001.00---1.00-------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GAGCGGCGCGCGAGGG........................................ 161.000.00---------------------------------------------------1.00-------------------------------------------------------------------------
..................................................................................CCGGCCGGGGGGCGA......................................................................................................................................................... 1511.001.00--1.00--------------------------------------------------------------------------------------------------------------------------
..................................................................................TCGCCCCCCGGCCGGGGC...................................................................................................................................................... 181.000.00----------------------------------------------------------1.00------------------------------------------------------------------
..........................................................................................................................CGCCCCGCCGCCGCGCGCC............................................................................................................. 1911.001.00-1.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................................GGGCTCCTGGGGCGGCGC......................................................................................................................................... 181.000.00----------------------------1.00------------------------------------------------------------------------------------------------
..................................................................................TCGCCCCCCGGCCGGGCGC..................................................................................................................................................... 191.000.00------------------------------------1.00----------------------------------------------------------------------------------------
................................................................................................................................CGGCGGCGGGGCGCGGGGG....................................................................................................... 1991.000.00--1.00--------------------------------------------------------------------------------------------------------------------------
............................................................................................................................CGCGCGGCGGCGGGGGG............................................................................................................. 171.000.00-------------------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GAGCGGCGCGCGAGGGCT...................................... 181.000.00-----------------------------------------------------------------------------1.00-----------------------------------------------
..................................................................................TCGCCCCCCGGCCGGGA....................................................................................................................................................... 171.000.00----------------------------------------1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GGCAGGCGTGCAGAGGGCAGATT.................... 231.000.00--------------------------------------------------------------------------------------------------1.00--------------------------
...................................................................................CGCCCCCCGGCCGGGCGGC.................................................................................................................................................... 190.600.00-0.20-----------------------------------------------------0.20-------------------------------------------------0.20-------------------
...................................................................................GCCCGGCCGGGGGGCG....................................................................................................................................................... 1650.600.60--0.20--------0.20-------------------------------------------------------------------------------------------0.20---------------------
..........................................................................................................................GGCGCGCGGCGGCGGGGGGG............................................................................................................ 2040.500.00-----------------0.25--------------------------------------------------------------------------------------0.25--------------------
.....................................................................................................CCGGGTCCGCCCCAG...................................................................................................................................... 1520.500.50------------------------------------------------------------------------------------------------------0.50----------------------
..........................................................................................................................GGCGCGCGGCGGCGGGGG.............................................................................................................. 1840.500.00------0.25-------------------------------------------------------------------------------------------------0.25--------------------
....................................................................................................CGGGTCCGCCCCAGG....................................................................................................................................... 1520.500.50------------------------------------------------0.50----------------------------------------------------------------------------
.............................................................................................................................................................................GCCGCCCGGCCCCGAGCGC.......................................................... 1920.500.50-----------------------------------------------------------------------------------------------------------0.50-----------------
....................................................................................................................................................................................TCCTGCCGCCCGGCCC...................................................... 1630.330.33--------------------------------------------------------------------------------------------------------------0.33--------------
..........................................................................................................................CCCCGCCGCCGCGCGCC............................................................................................................... 1740.250.25--------------------------------------------------0.25--------------------------------------------------------------------------
..........................................................................................................................GGCGCGCGGCGGCGGGGGGC............................................................................................................ 2040.250.00--------------------------------------------------------------------------------------------------------------------0.25--------
...................................................................................CGCCCCCCGGCCGGGCGGCG................................................................................................................................................... 200.200.00-----------------------------------------------------------------------------------------------------------------------0.20-----
.......................................................................................................................................................................................GCTCCTGCCGCCCGG.................................................... 1560.170.17-----------------------------------0.17-----------------------------------------------------------------------------------------
.......................................................................................................GGGGCGGACCCGGGGGGGG................................................................................................................................ 1990.110.00-------------0.11---------------------------------------------------------------------------------------------------------------
.......................................................................................................CCCCGGGTCCGCCCC.................................................................................................................................... 1590.110.11----------------------------------------------------------------------------------------------------------------0.11------------
.......................................................................................................GGGGCGGACCCGGGGCCGG................................................................................................................................ 1990.110.00-------------------------------------------------------------------------------------------------------------0.11---------------
.......................................................................................................GGGGCGGACCCGGGGCGCG................................................................................................................................ 1990.110.00-------------------------------------------------------------------------------------------------------------0.11---------------