ID: uc002bww.2_intron_2_0_chr15_101826007_r
GENE: (6)
chr15:101825957-101826468-


(1)
AGO2.ip 		(1)
B-CELL 		(1)
BRAIN 		(4)
BREAST 		(9)
CELL-LINE 		(3)
CERVIX 		(2)
HEART 		(1)
HELA 		(5)
LIVER 		(1)
OTHER 		(16)
SKIN 		(1)
TESTES

Sense strand
GGCAAACGGGGTGCACAGCTTGCAAAGGATATTGCCAGGAGAAGCAAAACGTAAGACACGGATATCCAACTTAACTCTACTTCACCTTCAGAAACATGATCTGATCTGTCTGGCAGTTCGTCTCCTACAAAATTAACCAAAAACTCTGACATATTAATGTGGTATTAAATTTGAGTGCTTATAGTCCATGTACATCAATGGTCCACACATCACAAGAAATTTCTACCAGCTTAGCAGAGCAAATATTTCAGTAGTCAGTCTTCATGTGATACCATGTACATCCTATTTTCTATATAGGAAGATGAACTGGATGGTGTTTCTGAAGGAGAGAGTTCTTGTATCAGTTTGTTAACAAAGATAAGATACTACACTGGTTGAATTACTTTCAAAAGCTTTTGAAAGTAAAAGAGAAGCAACTTCTGTTGGTCTAGGTCTAACAGTTATGTTCTTCCCCCTCTTAAGTTTTAATCCAGGTGCTGGTTTGCCAACTGACAAAAAGAAAGGTGGGCCAT
....................................................................................................................................................................................................................................((((....))))........((((......((((((...((((((((.((.....((((((((.....))))))))...)).))))))))..))))))....(((((((((....(((....)))....)))))).)))..)))).(((((.....)))))...........................................................................................................................
..................................................................................................................................................................................................................................227.................................................................................................................................................................391.......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR189786SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334SRR189787SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343335SRR029130(GSM416759)
DLD2. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040030(GSM532915)
G013N. (cervix)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR029124(GSM416753)
HeLa. (hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR029128(GSM416757)
H520. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532880(GSM532880)
G659T. (cervix)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................................................................................................................................................................................TAGCAGAGCAAATATTGGCG.....................................................................................................................................................................................................................................................................2010.000.00--7.00--3.00---------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................ACTGGTTGAATTACTCCT.............................................................................................................................188.000.00-7.00----------------------1.00--------------------------
..........................................................................................................................................................................................................................................................................................................AAGATGAACTGGATGGTGTTTCTGAAGGAGAGA.....................................................................................................................................................................................3313.003.00--------3.00------------------------------------------
........................................................................................................................................CCAAAAACTCTGACACTGC.....................................................................................................................................................................................................................................................................................................................................................................193.000.00----3.00----------------------------------------------
......................................................................TTAACTCTACTTCACCTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002.00-------------2.00-------------------------------------
..........................................AGCAAAACGTAAGACACGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00--------------2.00------------------------------------
.....................................................................................................................................................................................................................................................................................................ATAGGAAGATGAACTGGATGG......................................................................................................................................................................................................2112.002.00---------2.00-----------------------------------------
.........................................................ACGGATATCCAACTTAACTCCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................232.000.00---2.00-----------------------------------------------
...................................................................................ACCTTCAGAAACATGATCTGATC......................................................................................................................................................................................................................................................................................................................................................................................................................2312.002.00---------------2.00-----------------------------------
.....................................................................................................................................................................................................................................................................................................ATAGGAAGATGAACTGGATG.......................................................................................................................................................................................................2011.001.00------------------------------------1.00--------------
...................................CAGGAGAAGCAAAACGTAAGACAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00------------------1.00--------------------------------
..........................................................................................................................TCCTACAAAATTAACTTT....................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------1.00-------------
.......................................................................................................................................................................................................................................................................................................AGGAAGATGAACTGGATGGTGTTT.................................................................................................................................................................................................2411.001.00-------------------------1.00-------------------------
......CGGGGTGCACAGCTTGCAAGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................231.000.00--------------------------------1.00------------------
..............ACAGCTTGCAAAGGATATTGCCAGGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2831.001.00-----------------1.00---------------------------------
...........................................................................................................................................................................................................................................................................................................................GTTTCTGAAGGAGAGAGT...................................................................................................................................................................................1811.001.00---------------------1.00-----------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCAGGTGCTGGTTTGCCAACCGA....................261.000.00---1.00-----------------------------------------------
.......................................AGAAGCAAAACGTAACAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------1.00------------
................................................................................................TGATCTGATCTGTCTGGCAGTTCGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00-------------------1.00-------------------------------
......................................................................................................................................AACCAAAAACTCTGACATATTAATGTGGTATTAAA.......................................................................................................................................................................................................................................................................................................................................................3511.001.00------------------------------1.00--------------------
.................................................................................................GATCTGATCTGTCTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00---------------------------------------1.00-----------
.............................................................................................................................................................................................................................................................................................................ATGAACTGGATGGTGTTTCTGAAGGAGAGAGC...................................................................................................................................................................................321.000.00---1.00-----------------------------------------------
.......................................................................................................................................................................................................................................................................................................................TGGTGTTTCTGAAGGTTT.......................................................................................................................................................................................181.000.00---------------------------------1.00-----------------
.............................................................................TACTTCACCTTCAGAAACATGAT............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------1.00-----------------------------------------
......................................................................................................................................................................................................................................................TTCAGTAGTCAGTCTTCATGTGATACCATG............................................................................................................................................................................................................................................3011.001.00-----------------------------------1.00---------------
...................................................................................................TCTGATCTGTCTGGCACG...........................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------1.00---------------------------
.....................................................................................................................................................................................................................................................................................................ATAGGAAGATGAACTGGAT........................................................................................................................................................................................................1911.001.00-----------1.00---------------------------------------
......................................................................................................................................................................................................................AGAAATTTCTACCAGCTTAGCAGAG.................................................................................................................................................................................................................................................................................2511.001.00------------1.00--------------------------------------
.......................................................................................................................................................................................................................................TAGCAGAGCAAATATTGGAG.....................................................................................................................................................................................................................................................................201.000.00--1.00------------------------------------------------
.................................................................................................GATCTGATCTGTCTGGCAGT...........................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------1.00---------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................CACTGGTTGAATTACTTTC.............................................................................................................................1911.001.00----------------------------------1.00----------------
......................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAGCAACTTCTGTTGGTCTAGGTC..............................................................................2811.001.00-------1.00-------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCTGTTGGTCTAGGTCT.............................................................................2011.001.00----------------------1.00----------------------------
.........................................................................ACTCTACTTCACCTTTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------1.00-----------------------
........................................................................................................................................................................................................................................................................................................................GGTGTTTCTGAAGGAGAGAGTT..................................................................................................................................................................................2211.001.00----------------------------1.00----------------------
......................................................................................................................................................................................................................AGAAATTTCTACCAGCTT........................................................................................................................................................................................................................................................................................1811.001.00------------1.00--------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGCTGGTTTGCCAACCGAC...................221.000.00---1.00-----------------------------------------------
.....ACGGGGTGCACAGCTTGCAAAGGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................261.000.00-------1.00-------------------------------------------
..................................................................................................................................................................................................................................................................................................TATATAGGAAGATGAACTGGATGGTGTT..................................................................................................................................................................................................2811.001.00----------------------------------------1.00----------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAGGTGCTGGTTTGCCAACCGAC...................261.000.00---1.00-----------------------------------------------
...............................................................................................ATGATCTGATCTGTCTGGCAGTTCG........................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00----------------1.00----------------------------------
.......................................................................................................................................................................................................................................................................................................AGGAAGATGAACTGGATGGT.....................................................................................................................................................................................................2011.001.00--------------------1.00------------------------------
...AAACGGGGTGCACAGCCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00---1.00-----------------------------------------------
....AACGGGGTGCACAGCTTGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.670.67-------------------------------------------0.67-------
....AACGGGGTGCACAGCTTGCAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.670.67-----------------------------------------0.67---------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATCCAGGTGCTGG................................1640.500.50----------------0.50----------------------------------
.....................GCAAAGGATATTGCCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.330.33-----------------------------------------------0.33---
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGACAAAAAGAAAGGTGGGCCA.2330.330.33------------------------------------------0.33--------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCAGGTGCTGGTTTGC...........................1930.330.33---------------------------------------------0.33-----
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGAAAGGTGGGCCAT1930.330.33------------------------------------------0.33--------
.........................AGGATATTGCCAGGAGAAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.330.33------------------0.33--------------------------------
..................CTTGCAAAGGATATTGCCAGGAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.330.33------------------------------------------------0.33--
........................AAGGATATTGCCAGGAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.330.33-----------------0.33---------------------------------
..................CTTGCAAAGGATATTGCCAGGAGAAGCAAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................3230.330.33----------------------------------------------0.33----
........................AAGGATATTGCCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1650.200.20-------------------------------------------------0.20-

Antisense strand
GGCAAACGGGGTGCACAGCTTGCAAAGGATATTGCCAGGAGAAGCAAAACGTAAGACACGGATATCCAACTTAACTCTACTTCACCTTCAGAAACATGATCTGATCTGTCTGGCAGTTCGTCTCCTACAAAATTAACCAAAAACTCTGACATATTAATGTGGTATTAAATTTGAGTGCTTATAGTCCATGTACATCAATGGTCCACACATCACAAGAAATTTCTACCAGCTTAGCAGAGCAAATATTTCAGTAGTCAGTCTTCATGTGATACCATGTACATCCTATTTTCTATATAGGAAGATGAACTGGATGGTGTTTCTGAAGGAGAGAGTTCTTGTATCAGTTTGTTAACAAAGATAAGATACTACACTGGTTGAATTACTTTCAAAAGCTTTTGAAAGTAAAAGAGAAGCAACTTCTGTTGGTCTAGGTCTAACAGTTATGTTCTTCCCCCTCTTAAGTTTTAATCCAGGTGCTGGTTTGCCAACTGACAAAAAGAAAGGTGGGCCAT
....................................................................................................................................................................................................................................((((....))))........((((......((((((...((((((((.((.....((((((((.....))))))))...)).))))))))..))))))....(((((((((....(((....)))....)))))).)))..)))).(((((.....)))))...........................................................................................................................
..................................................................................................................................................................................................................................227.................................................................................................................................................................391.......................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR189786SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334SRR189787SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR343335SRR029130(GSM416759)
DLD2. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR040030(GSM532915)
G013N. (cervix)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR029124(GSM416753)
HeLa. (hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR029128(GSM416757)
H520. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532880(GSM532880)
G659T. (cervix)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................................................................................................ATTTGAGTGCTTATAATTG..................................................................................................................................................................................................................................................................................................................................... 198.000.006.00---------2.00----------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................ACTGGTTGAATTACTTGA............................................................................................................................. 183.000.00-3.00-------------------------------------------------
........................................................................................................................................................................ATTTGAGTGCTTATAATTA..................................................................................................................................................................................................................................................................................................................................... 192.000.001.00-----1.00--------------------------------------------
........................................................................................................................................................................ATTTGAGTGCTTATAATCG..................................................................................................................................................................................................................................................................................................................................... 191.000.001.00--------------------------------------------------
.......................................................................................................................................................................GGACTATAAGCACTCAAATT..................................................................................................................................................................................................................................................................................................................................... 2011.001.00-----------------------------1.00---------------------
........................................................................................................................................................................ATTTGAGTGCTTATAGTTC..................................................................................................................................................................................................................................................................................................................................... 191.000.001.00--------------------------------------------------
............................................................................................................................................................................................................................................................................................................GATGAACTGGATGGTGTC.................................................................................................................................................................................................. 181.000.00--------------------------1.00------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTTCTTCCCCCTTAG..................................................... 181.000.001.00--------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................ACTGGTTGAATTACTTG.............................................................................................................................. 171.000.00-1.00-------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGAGAAGCAACTGACC.......................................................................................... 201.000.00-------1.00-------------------------------------------
........................................................................................................................................................................ATTTGAGTGCTTATAAATA..................................................................................................................................................................................................................................................................................................................................... 191.000.00------1.00--------------------------------------------
......................................................................................................................................................................AAATTTGAGTGCTTATATTT...................................................................................................................................................................................................................................................................................................................................... 201.000.001.00--------------------------------------------------
......................................................................................................................................................................AAATTTGAGTGCTTATATA....................................................................................................................................................................................................................................................................................................................................... 191.000.001.00--------------------------------------------------
...............................................................................AGATCATGTTTCTGAAGGTGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................... 2311.001.00-------------------------------1.00-------------------
........................................................................................................................................................................ATTTGAGTGCTTATAATCA..................................................................................................................................................................................................................................................................................................................................... 191.000.001.00--------------------------------------------------
........................................................................................................................................................................ATTTGAGTGCTTATAATTC..................................................................................................................................................................................................................................................................................................................................... 191.000.00------1.00--------------------------------------------
........................................................................................................................................................................ATTTGAGTGCTTATAATGG..................................................................................................................................................................................................................................................................................................................................... 191.000.001.00--------------------------------------------------
.....................................................................................AGATCATGTTTCTGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................... 1720.500.50--------------------------------------------0.50------
............................................................................................................................................................................................................................GCTAAGCTGGTAGAA..................................................................................................................................................................................................................................................................................... 1590.110.11--------------------------------------------------0.11