ID: uc002bvg.2_intron_2_0_chr15_100161286_f.5p
GENE: (3)
chr15:100161236-100161485+


(1)
AGO2.ip
(1)
AGO3.ip
(1)
BRAIN
(9)
CELL-LINE
(1)
CERVIX
(2)
HEART
(1)
HELA
(2)
LIVER
(1)
OTHER
(8)
SKIN

Sense strand
GATGGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCTGGACCTCAGGTAATCTACCCTCCTCGGCCTCCCAAAGCGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCAGCCTCACCGATGTCTATCTACAGAATATTTAATAACAAAACTAGAACTACATTTTTCCTACCCACAACAATACATTGTGAACATTTATTGTACAGTGTTCCACCTTTTTAATGGCTACAGTATTGTAGGGACAGG
............................................................................((.(((((.....(((((((........))))))).)))))))....(((((...((((.....................))))...)))))..................................................................................
.......................................................................72................................................................................................170..............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189786SRR189784SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343336DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189782GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
............................................................................AGCGCTGGGATTACAGGCGAGCC.......................................................................................................................................................2314.000.0010.004.00----------------------------
...........................................................................AAGCGCTGGGATTACAGGCGAGCC.......................................................................................................................................................248.000.006.002.00----------------------------
....................................................................................................................................................AACAAAACTAGAACTCTG....................................................................................183.000.00----------------------1.00-1.00--1.00--
............................................................................AGCGCTGGGATTACAGGCGATTC.......................................................................................................................................................232.000.002.00-----------------------------
...........................................................................AAGCGCTGGGATTACAGGCGTGAGCAC....................................................................................................................................................272.000.002.00-----------------------------
...........................................................................AAGCGCTGGGATTACAGGCGCTAG.......................................................................................................................................................242.000.002.00-----------------------------
............................................................................AGCGCTGGGATTACAGGCGACCC.......................................................................................................................................................232.000.00-2.00----------------------------
..............ATGTTGGCCAGGCTGGTCTCGAACTCTCGTC.............................................................................................................................................................................................................312.000.002.00-----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGAACCC....................................................................................................................................................262.000.00-2.00----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGAGCCACATG................................................................................................................................................302.000.00-2.00----------------------------
........................................................................................ACAGGCGTGAGCCACTGCGCCTGGCCAGAGCC..................................................................................................................................321.000.001.00-----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGAGGCCA...................................................................................................................................................271.000.00-1.00----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGCGGC.....................................................................................................................................................251.000.001.00-----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGGCT......................................................................................................................................................241.000.00-1.00----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGAGCTAG...................................................................................................................................................271.000.001.00-----------------------------
...............................................................................................TGAGCCACTGCGCCTGGCCAGCTGAG.................................................................................................................................261.000.001.00-----------------------------
............................................................................AGCGCTGGGATTACAGGCGAGCT.......................................................................................................................................................231.000.001.00-----------------------------
..............................................................................CGCTGGGATTACAGGCGTGAGCCACTGCACG.............................................................................................................................................311.000.00-1.00----------------------------
..............................................................................CGCTGGGATTACAGGCGTGAGGTA....................................................................................................................................................241.000.001.00-----------------------------
..............................................................................CGCTGGGATTACAGGCGTGAGCCGTG..................................................................................................................................................261.000.00------1.00-----------------------
............................................................................AGCGCTGGGATTACAGGCGTGAGCCACTGCGA..............................................................................................................................................321.000.001.00-----------------------------
...........................................................................AAGCGCTGGGATTACAGGCGTGCGTG.....................................................................................................................................................261.000.001.00-----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGAGCAAGC..................................................................................................................................................281.000.001.00-----------------------------
...............TGTTGGCCAGGCTGGTCTCGAACTCTCGGG.............................................................................................................................................................................................................301.000.001.00-----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGAGCTGGC..................................................................................................................................................281.000.001.00-----------------------------
.....................................................................................................................................TACAGAATATTTAATGTAC..................................................................................................191.000.00-------------1.00----------------
....GAGTTTCACCATGTTGGCTAAA................................................................................................................................................................................................................................221.000.00--------------------------1.00---
.......................................................................................................................................................................................................................CACCTTTTTAATGGCTACAGTATTGTAGGGA....3111.001.00-------1.00----------------------
............................................................................AGCGCTGGGATTACAGGCGTGAGCAAG...................................................................................................................................................271.000.00-1.00----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGAGCCCCCA.................................................................................................................................................291.000.001.00-----------------------------
...........................................................................AAGCGCTGGGATTACAGGCGTGAGCAATC..................................................................................................................................................291.000.00-1.00----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGAGCAGCT..................................................................................................................................................281.000.001.00-----------------------------
..............................................................................CGCTGGGATTACAGGCGTGAGTCAG...................................................................................................................................................251.000.00-1.00----------------------------
.................................................................................................AGCCACTGCGCCTGGCCAGCCAGAG................................................................................................................................251.000.001.00-----------------------------
..........CACCATGTTGGCCAGGCTGGTCTCGAACTCTGCAC.............................................................................................................................................................................................................351.000.00--------1.00---------------------
...........................................................................AAGCGCTGGGATTACAGGCGAGTC.......................................................................................................................................................241.000.00-1.00----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGATCT.....................................................................................................................................................251.000.001.00-----------------------------
..........................................................................AAAGCGCTGGGATTACAGGCGT..........................................................................................................................................................2201.001.00--------------1.00---------------
...............................................................................................................................................................AACTACATTTTTCCTACC.........................................................................1811.001.00-----------------1.00------------
............................................................................AGCGCTGGGATTACAGGCGTGGAG......................................................................................................................................................241.000.00-1.00----------------------------
....GAGTTTCACCATGTTGGCCAGTCTG.............................................................................................................................................................................................................................251.000.00--1.00---------------------------
........................................................................................ACAGGCGTGAGCCACTGCGCCTGGCCAGGTTC..................................................................................................................................321.000.001.00-----------------------------
........................................................................................................................................................AAACTAGAACTACATTTTTCCTACCCA.......................................................................2711.001.00-----------------------1.00------
..........................................................................AAAGCGCTGGGATTACAGGCGAGCC.......................................................................................................................................................251.000.001.00-----------------------------
.................TTGGCCAGGCTGGTCTCGAACTCT.................................................................................................................................................................................................................2401.001.00---------------------1.00--------
.....................CCAGGCTGGTCTCGAACTCTCTCC.............................................................................................................................................................................................................241.000.001.00-----------------------------
.....AGTTTCACCATGTTGGCCAGGCTGGCCCC........................................................................................................................................................................................................................291.000.001.00-----------------------------
.....AGTTTCACCATGTTGGCCAGGCTGGGCCT........................................................................................................................................................................................................................291.000.00-1.00----------------------------
............................................................................AGCGCTGGGATTACAGGCGTGAGCCGCG..................................................................................................................................................281.000.001.00-----------------------------
.......................................................................CCCAAAGCGCTGGGATTACAGGCGCTC........................................................................................................................................................271.000.00------------------1.00-----------
........................................................................................................................................................................................................................................CAGTATTGTAGGGAC...1550.200.20-----------------------------0.20

Antisense strand
GATGGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCTGGACCTCAGGTAATCTACCCTCCTCGGCCTCCCAAAGCGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCAGCCTCACCGATGTCTATCTACAGAATATTTAATAACAAAACTAGAACTACATTTTTCCTACCCACAACAATACATTGTGAACATTTATTGTACAGTGTTCCACCTTTTTAATGGCTACAGTATTGTAGGGACAGG
............................................................................((.(((((.....(((((((........))))))).)))))))....(((((...((((.....................))))...)))))..................................................................................
.......................................................................72................................................................................................170..............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189786SRR189784SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343336DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189782GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
................GTTGGCCAGGCTGGTCTCGAACTCTGGTG............................................................................................................................................................................................................. 295.000.001.004.00----------------------------
..TGGAGTTTCACCATGTTGGCCACTA............................................................................................................................................................................................................................... 252.000.00---2.00--------------------------
............................................................................AGCGCTGGGATTACAGGCGTACAG...................................................................................................................................................... 242.000.002.00-----------------------------
.............................................................................................................................................................AGAACTACATTTTTCCTACCCACAACTG................................................................. 282.000.00-----2.00------------------------
.............................................................................GCGCTGGGATTACAGGGGG.......................................................................................................................................................... 191.000.00---------1.00--------------------
............................................................................ACGCCTGTAATCCCAGCGCT.......................................................................................................................................................... 2001.001.00----------------1.00-------------
..................................GAACTCTGGACCTCAGAGG..................................................................................................................................................................................................... 191.000.00----------------------------1.00-
................................TCGAACTCTGGACCTCACGGA..................................................................................................................................................................................................... 211.000.00------------1.00-----------------
.............................GTCTCGAACTCTGGACCTTCTA....................................................................................................................................................................................................... 221.000.00----------1.00-------------------
............................................................................TCACGCCTGTAATCCCAGCGCT........................................................................................................................................................ 2201.001.00--1.00---------------------------
.ATGGAGTTTCACCATGTTGGCCAAG................................................................................................................................................................................................................................ 251.000.00--------------------1.00---------
........................GGCTGGTCTCGAACTCTGGACCTCGAG....................................................................................................................................................................................................... 271.000.001.00-----------------------------
..................................................................................................................................ATCTACAGAATATTTGCCC..................................................................................................... 191.000.00----1.00-------------------------
....................................................................................................................................................................................................................TTCCACCTTTTTAATAAAG................... 191.000.00---------------1.00--------------
........................GGCTGGTCTCGAACTCTGCCC............................................................................................................................................................................................................. 211.000.00-1.00----------------------------
..TGGAGTTTCACCATGTTGGCCAGGCTGGTCCC........................................................................................................................................................................................................................ 321.000.00-1.00----------------------------
..TGGAGTTTCACCATGTTGGCCACTTT.............................................................................................................................................................................................................................. 261.000.00---1.00--------------------------
...........................................................................................GGCGTGAGCCACTGCGCCTGGCCACC..................................................................................................................................... 261.000.001.00-----------------------------
....................GCCAGGCTGGTCTCGAACTCTGGTG............................................................................................................................................................................................................. 251.000.001.00-----------------------------
................GTTGGCCAGGCTGGTCTCGAACTCTCGGC............................................................................................................................................................................................................. 291.000.001.00-----------------------------
................GTTGGCCAGGCTGGTCTCGAACTCTGGCG............................................................................................................................................................................................................. 291.000.001.00-----------------------------
..............................................................CCTCGGCCTCCCAAAGCGCTGGGAGT.................................................................................................................................................................. 261.000.00-------------------1.00----------
...................AGAGTTCGAGACCAGCCTGGCC................................................................................................................................................................................................................. 2201.001.00-------------------------1.00----
....GAGTTTCACCATGTTGGCCAGAAC.............................................................................................................................................................................................................................. 241.000.00----1.00-------------------------
..TGGAGTTTCACCATGTTGGCCACAG............................................................................................................................................................................................................................... 251.000.00-----------1.00------------------
................GTTGGCCAGGCTGGTCTCGAACTCTGGCA............................................................................................................................................................................................................. 291.000.00-1.00----------------------------