ID: uc002bqf.3_intron_0_0_chr15_91474636_r
GENE: (3)
chr15:91474586-91474983-


(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(6)
B-CELL 		(9)
BREAST 		(28)
CELL-LINE 		(1)
CERVIX 		(4)
HEART 		(3)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(2)
OTHER 		(19)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GGCAGACAAGCTGTACAATCTGAGGGACCTGAATCGCTGCACCCCAGAGGGTACGCTTTCGTATGGGCTGTAAGGGAAAAGGGAGGGGGATGCCGCCTTCTGAAGACACATGTTGGTCAGTTCCCCTGAAAAACCCTGGGCATTCTTAATTCCCAAATTAATCCTACTGGACCACTCTTTGATCTTCTTTCATACAGTAAAAATACAATAGCTGGGCCAAGGGGAAGTTTTCAGGACAGCTCATTCCATCAGGAACTCATGGCCTTGAACCAAGCTTGCCAGGAAGTGGGGAAAAGGCAGTGCTTTCCTTGACATCACGCTAGCAAGTTTCTGTCGACTCTTATGCAGGATGGTCAGAACATCGAGTCCAGGAATACTTCGAGTGGGCAGCGCAGGTG
..................................................(((((....)))))..(((...((((...((((.((.((...)).))..((((.(((....)))..))))...))))......)))).))).................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150......................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784SRR189787SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
............................................................................AAAAGGGAGGGGGATGTAG...............................................................................................................................................................................................................................................................................................................1917.000.00-5.00------1.00----1.001.00----------1.00-1.001.00--1.00----------1.00-------1.00----1.001.00-------------------1.00------
.............................................................................AAAGGGAGGGGGATGTAGA..............................................................................................................................................................................................................................................................................................................1917.000.00-3.00------1.00----1.002.00-----------1.001.001.00------1.00-----------1.00----------1.00----1.00-1.001.00-------1.00--------
............................................................................AAAAGGGAGGGGGATGTA................................................................................................................................................................................................................................................................................................................185.000.00-------------1.00--3.00-----1.00------------------------------------------------------------
............................................................................AAAAGGGAGGGGGATGTAGA..............................................................................................................................................................................................................................................................................................................205.000.00---2.00-----1.00---------------1.00------------------------------------------1.00--------------
.............................................................................................................................................................................................................................................................AACTCATGGCCTTGAACCAAGCTTG........................................................................................................................2515.005.00--3.00--------1.00--------1.00--------------------------------------------------------------
..............................................................ATGGGCTGTAAGGGAAAAGGGAGGG.......................................................................................................................................................................................................................................................................................................................2514.004.00-------2.00--------------------------------------------------------1.00-------------1.00----
............................................................................AAAAGGGAGGGGGATGT.................................................................................................................................................................................................................................................................................................................173.000.00-------------------------------------------1.00--------1.00-------1.00----------------------
........................................................................................................................................................................................................................................................................................AGGAAGTGGGGAAAAGGCAGTGCTTTCCTTGACATCACGCTAGCAAGTTTCTGTCGACTCTTATGCAG..................................................6813.003.00------3.00----------------------------------------------------------------------------
.......................................................................................GGATGCCGCCTTCTGCT......................................................................................................................................................................................................................................................................................................173.000.003.00----------------------------------------------------------------------------------
............................................................................AAAAGGGAGGGGGATGTAGC..............................................................................................................................................................................................................................................................................................................202.000.00------------------2.00----------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................ATCGAGTCCAGGAATACTT...................1912.002.00---------2.00-------------------------------------------------------------------------
.............................................................................AAAGGGAGGGGGATGTTTT..............................................................................................................................................................................................................................................................................................................192.000.00-----2.00-----------------------------------------------------------------------------
.......................................................................................GGATGCCGCCTTCTGCTTG....................................................................................................................................................................................................................................................................................................192.000.001.00-----------------------------------------------------------------------1.00----------
............................................................................AAAAGGGAGGGGGATGTT................................................................................................................................................................................................................................................................................................................182.000.00-----2.00-----------------------------------------------------------------------------
....................................................ACGCTTTCGTATGGGCTG........................................................................................................................................................................................................................................................................................................................................1812.002.00----------------------------------1.00---------------------------1.00--------------------
............................................................................................................................................................................................................................................................................................................................................................................AGTCCAGGAATACTTCGAGTG.............2112.002.00----2.00------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................GTCGACTCTTATGCAGGATGGT............................................2211.001.00---1.00-------------------------------------------------------------------------------
...AGACAAGCTGTACAATCTGAGGGAC..................................................................................................................................................................................................................................................................................................................................................................................2511.001.00------------1.00----------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................AGTCCAGGAATACTTCGAATG.............211.000.00----1.00------------------------------------------------------------------------------
..........CTGTACAATCTGAGGGACCTGAAT............................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----------------------------1.00-----------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................CACGCTAGCAAGTTTCTGTCGACTCTTATTCAG..................................................331.000.00---------------1.00-------------------------------------------------------------------
...AGACAAGCTGTACAATCTGAGGGACC.................................................................................................................................................................................................................................................................................................................................................................................2611.001.001.00----------------------------------------------------------------------------------
......CAAGCTGTACAATCTGAGGGACCTGAATC...........................................................................................................................................................................................................................................................................................................................................................................2911.001.00-----------------1.00-----------------------------------------------------------------
.................................................................................................................................................................................................................AGCTGGGCCAAGGGGAAGTTTCC......................................................................................................................................................................231.000.00-----------------------1.00-----------------------------------------------------------
...............................................................................................................................................................................................................ATAGCTGGGCCAAGGGGGAG...........................................................................................................................................................................201.000.00--1.00--------------------------------------------------------------------------------
.............................................................................AAAGGGAGGGGGATGCAG...............................................................................................................................................................................................................................................................................................................181.000.00-------1.00---------------------------------------------------------------------------
....................................................ACGCTTTCGTATGGGCTGTAAGGGAAAA..............................................................................................................................................................................................................................................................................................................................2811.001.00---------------------------------1.00-------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................TCGAGTCCAGGAATACTTCGAGTGGGCAGCG......3111.001.00---------------1.00-------------------------------------------------------------------
............GTACAATCTGAGGGACCT................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------------------------------------------1.00----------------------------------
.......................................................................................................................................................................................................................................................................................................................ACATCACGCTAGCAAGTTTCTGTTGCC............................................................271.000.00-----------------------------------------------------------------------------1.00-----
..................................................GTACGCTTTCGTATGGGCT.........................................................................................................................................................................................................................................................................................................................................1911.001.00---------------------------------------------------------1.00-------------------------
......................................................................................................................................................................................................................................................................................................................................................ATGCAGGATGGTCAGAACATCGAG................................2411.001.00-----------------------------------------------------------1.00-----------------------
............................................................................AAAAGGGAGGGGGATGCAG...............................................................................................................................................................................................................................................................................................................191.000.00------------------------------------------------------1.00----------------------------
................AATCTGAGGGACCTGAATCGC.........................................................................................................................................................................................................................................................................................................................................................................2111.001.00------------------------------------1.00----------------------------------------------
...AGACAAGCTGTACAATCTG........................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------------------------------------------1.00--------------------------------------
.....ACAAGCTGTACAATCTGAGGGATG.................................................................................................................................................................................................................................................................................................................................................................................241.000.00----1.00------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................CAGGATGGTCAGAACTCTG..................................191.000.00--------1.00--------------------------------------------------------------------------
........AGCTGTACAATCTGAGGGA...................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------1.00------------------------------------------
............................................................GTATGGGCTGTAAGGTCT................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------1.00---------------------------------
..CAGACAAGCTGTACAATCTGAA......................................................................................................................................................................................................................................................................................................................................................................................221.000.00----------------------1.00------------------------------------------------------------
.......................................................................................GGATGCCGCCTTCTGTTTT....................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------------------------1.00-----------------------------
...AGACAAGCTGTACAATCTGAGGGACCTGAATCGC.........................................................................................................................................................................................................................................................................................................................................................................3411.001.001.00----------------------------------------------------------------------------------
......................AGGGACCTGAATCGCTGCACCCCAGATT............................................................................................................................................................................................................................................................................................................................................................281.000.00------------1.00----------------------------------------------------------------------
................AATCTGAGGGACCTGAATCGCT........................................................................................................................................................................................................................................................................................................................................................................2211.001.00------------------------------1.00----------------------------------------------------
..................TCTGAGGGACCTGAATCG..........................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------1.00------------------------------------------------------------------------
................................................................................................................................................CTTAATTCCCAAATTTC.............................................................................................................................................................................................................................................171.000.00----------------------------------------------------------------------1.00------------
............................CTGAATCGCTGCACCCCAGAGG............................................................................................................................................................................................................................................................................................................................................................2211.001.00--------------------------1.00--------------------------------------------------------
................................................................................................................................AAAAACCCTGGGCATTCAA...........................................................................................................................................................................................................................................................191.000.00---------------------1.00-------------------------------------------------------------
................................................................................................................................................................................................................................................................TCATGGCCTTGAACCAAGC...........................................................................................................................1911.001.00---------------1.00-------------------------------------------------------------------
...........................................................................GAAAAGGGAGGGGGATGTAGC..............................................................................................................................................................................................................................................................................................................211.000.00-----------------------------------------------------------------------1.00-----------
.........GCTGTACAATCTGAGGGACCTGA..............................................................................................................................................................................................................................................................................................................................................................................2311.001.00---1.00-------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................CAGGAATACTTCGAGTGGGCAG........2211.001.00---------------------------------------------------------------------1.00-------------
.....ACAAGCTGTACAATCTGAGGGACC.................................................................................................................................................................................................................................................................................................................................................................................2411.001.00---------------------------------------------------------------------------1.00-------
...................................................................................................................................................................................................................................................................................................................................CAAGTTTCTGTCGACTCTTATGCAGGATGGTCAG.........................................3411.001.001.00----------------------------------------------------------------------------------
.............................................................................AAAGGGAGGGGGATGTAT...............................................................................................................................................................................................................................................................................................................181.000.00-1.00---------------------------------------------------------------------------------
.......................................................................................GGATGCCGCCTTCTGTT......................................................................................................................................................................................................................................................................................................171.000.00-------------------------------------------------------------1.00---------------------
...AGACAAGCTGTACAATCTGAGGGACCTGAATCGCTG.......................................................................................................................................................................................................................................................................................................................................................................3611.001.001.00----------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................CAGAACATCGAGTCCAGGAATACTTCGA................2811.001.00---------------------------------------1.00-------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................ATGCAGGATGGTCAGAAC......................................1811.001.00-------------------------------------------------------------------1.00---------------
...........................................................................................GCCGCCTTCTGAAGACACA................................................................................................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------1.00---------
.......................................................................................................................................................................................................................................................................................................................................................................................ACTTCGAGTGGGCAGCGCAGGCGG241.000.00------------------------1.00----------------------------------------------------------
.............................................................................AAAGGGAGGGGGATGCAGC..............................................................................................................................................................................................................................................................................................................191.000.00-1.00---------------------------------------------------------------------------------
..CAGACAAGCTGTACAATCTGAGGGACC.................................................................................................................................................................................................................................................................................................................................................................................2711.001.00---------------------------------------------------1.00-------------------------------
.............................................................................................................................................................................................................CAATAGCTGGGCCAAGGGGAAGTTT........................................................................................................................................................................2511.001.00--------------------------------1.00--------------------------------------------------
................AATCTGAGGGACCTGAATCG..........................................................................................................................................................................................................................................................................................................................................................................2011.001.00---1.00-------------------------------------------------------------------------------
.....................GAGGGACCTGAATCGCTGAA.....................................................................................................................................................................................................................................................................................................................................................................201.000.00------------1.00----------------------------------------------------------------------
....GACAAGCTGTACAATCTGAGGGACCTGAAT............................................................................................................................................................................................................................................................................................................................................................................3011.001.001.00----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................AACTCATGGCCTTGAACCAAGCCTG........................................................................................................................251.000.00--------------------1.00--------------------------------------------------------------
.......................................................................................GGATGCCGCCTTCTGCGTG....................................................................................................................................................................................................................................................................................................191.000.001.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................TTGCCAGGAAGTGGGGAAAGGGC....................................................................................................231.000.00------------------------1.00----------------------------------------------------------
.......................................................................................................................................................................................................................................CAGGACAGCTCATTCCATCAGGAACTCATGGC.......................................................................................................................................3211.001.001.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................CTTGACATCACGCTAGCAAG.......................................................................2011.001.00----------------------------------------------1.00------------------------------------
...............................................................................................................................................................................................................................................................................................................TTTCCTTGACATCACGC..............................................................................1720.500.50---------------------------------------------------------------------------------0.50-
.............................................................TATGGGCTGTAAGGGAAAA..............................................................................................................................................................................................................................................................................................................................1920.500.50----------------------------------------------------------------------------------0.50
......................................GCACCCCAGAGGGTACG.......................................................................................................................................................................................................................................................................................................................................................1720.500.50--------------------------------------------------------------------------------0.50--
...AGACAAGCTGTACAATCT.........................................................................................................................................................................................................................................................................................................................................................................................1820.500.50-------------------------------------------------------------------------------0.50---

Antisense strand
GGCAGACAAGCTGTACAATCTGAGGGACCTGAATCGCTGCACCCCAGAGGGTACGCTTTCGTATGGGCTGTAAGGGAAAAGGGAGGGGGATGCCGCCTTCTGAAGACACATGTTGGTCAGTTCCCCTGAAAAACCCTGGGCATTCTTAATTCCCAAATTAATCCTACTGGACCACTCTTTGATCTTCTTTCATACAGTAAAAATACAATAGCTGGGCCAAGGGGAAGTTTTCAGGACAGCTCATTCCATCAGGAACTCATGGCCTTGAACCAAGCTTGCCAGGAAGTGGGGAAAAGGCAGTGCTTTCCTTGACATCACGCTAGCAAGTTTCTGTCGACTCTTATGCAGGATGGTCAGAACATCGAGTCCAGGAATACTTCGAGTGGGCAGCGCAGGTG
..................................................(((((....)))))..(((...((((...((((.((.((...)).))..((((.(((....)))..))))...))))......)))).))).................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150......................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189782SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784SRR189787SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
........TGCAGCGATTCAGGTCCCTCAGATTGTACAGCT..................................................................................................................................................................................................................................................................................................................................................................... 3312.002.00-------------------2.00---------------------------------------------------------------
.................................................................................................TTCTGAAGACACATGCCGT.......................................................................................................................................................................................................................................................................................... 192.000.00-----------2.00-----------------------------------------------------------------------
..................................................................................................................................................................CCTACTGGACCACTCTTTGGCTG..................................................................................................................................................................................................................... 231.000.00---------------------1.00-------------------------------------------------------------
............................................................................................................GGGGAACTGACCAACATG................................................................................................................................................................................................................................................................................ 1811.001.00----------1.00------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................TGGACTCGATGTTCTGACCATCCTGC............................ 2611.001.00-----------------1.00-----------------------------------------------------------------
.....................................................................................................................................................................................................TAAAAATACAATAGCTGT....................................................................................................................................................................................... 181.000.00---------------------------------------------1.00-------------------------------------
.........................................................................GGGAAAAGGGAGGGGGCC................................................................................................................................................................................................................................................................................................................... 181.000.00-----------------------------------------1.00-----------------------------------------
....CCCTCAGATTGTACAGCTTGTC.................................................................................................................................................................................................................................................................................................................................................................................... 2211.001.00------1.00----------------------------------------------------------------------------
.....................................................................................................................................................................ACTGGACCACTCTTTGGG....................................................................................................................................................................................................................... 181.000.00--1.00--------------------------------------------------------------------------------
...................................................................................................................................................................ATCAAAGAGTGGTCCAGTAG....................................................................................................................................................................................................................... 2011.001.00----------1.00------------------------------------------------------------------------
........................................................................................................................................................................................................................................AGGACAGCTCATTCCACGGT.................................................................................................................................................. 201.000.00-----------------------1.00-----------------------------------------------------------
....................................................................................................................................................................................TTGTATTTTTACTGTATGAAAGAAGATC.............................................................................................................................................................................................. 2811.001.00-----------------1.00-----------------------------------------------------------------
........................................................................................................GGGGAACTGACCAACATGTGTC................................................................................................................................................................................................................................................................................ 2211.001.00-------------------------------------1.00---------------------------------------------