ID: uc002bof.2_intron_14_0_chr15_90192006_r
GENE: KIF7(4)
chr15:90191956-90192254-


(2)
AGO2.ip
(4)
B-CELL
(1)
BRAIN
(3)
BREAST
(6)
CELL-LINE
(1)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(1)
LIVER
(2)
OTHER
(28)
SKIN
(1)
TESTES

Sense strand
CCTCAGCGCCGGGGCAGCCACATACCCTACCGCGACTCCAAGATCACCCGGTGAGCTGCCCCCTGGCTCCTATGTGGCCTGGGGGCCGGGGAGGCGGGGAGTGTCCAGCACACCAGTGGGGGTGGAAGCCCAGGTCCCCTGAGGTCTCCAGCCCACGGGAACCGCGCCAGGAGCCGGTCCCAGGTCTGGCCCGCTGGCCCTGGGCCTGGAGCGTCGGGGCCCCTGAGAGCCTCCCCCTCGCGCCCTCAGGATCCTCAAAGACTCGCTGGGCGGGAACGCCAAGACGGTGATGATCGCCT
.................................................................................((((((((...((((.((.(((.....))).((.((.(((.((((..((((((...)))).))..)))).))))).))..)).)))).((.(((((........))))))).))))))))((((((.((...)).)))))).............................................................................
.................................................................................82..............................................................................................................................................226.......................................................................
SizePerfect hitTotal NormPerfect NormSRR038852(GSM458535)
QF1160MB. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040006(GSM532891)
G601N. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
...........................................................................................................................................................................................................GCCTGGAGCGTCGGGCCCA.............................................................................19125.005.0020.00--3.00-------2.00-------------------------------------
...........................................................................................................................................................................................................GCCTGGAGCGTCGGGC................................................................................16113.005.00----2.001.00----1.00---1.00--1.00--1.00-------1.00--1.00--1.001.00---1.00-1.00-------
...........................................................................................................................................................................................................GCCTGGAGCGTCGGGCCC..............................................................................1818.005.005.00-------2.00----1.00-----------------------------------
..........................................................................................................................................................................................................GGCCTGGAGCGTCGGGCCCA.............................................................................206.000.006.00------------------------------------------------
...........................................................................................................................................................................................................GCCTGGAGCGTCGGG.................................................................................1515.005.00--1.00----1.00--1.00-----1.00---------------1.00----------------
..........................................................................................................................................................................................................GGCCTGGAGCGTCGGGCCC..............................................................................194.000.00-1.00-------2.00-----------1.00---------------------------
..........................................................................................................................................................................................................GGCCTGGAGCGTCGGGC................................................................................174.000.00------1.001.00----------1.00-------------------1.00----------
.............................................................................................................................................................................................................CTGGAGCGTCGGGGC...............................................................................1512.002.00-1.001.00----------------------------------------------
...........................................................................................................................................................................................................GCCTGGAGCGTCGGGCC...............................................................................1712.005.00----1.00----------1.00---------------------------------
..............................................................................................................................................................................................................TGGAGCGTCGGGGCCA.............................................................................1621.501.00-1.50-----------------------------------------------
..............................................................................................................................................................................................................TGGAGCGTCGGGGCCATA...........................................................................1821.501.00-------------------------------------------0.50-0.50-0.50-
..................................................................................................................................................................................................................................................................AGACTCGCTGGGCGGGAACGCCAAGAC..............2711.001.00-----1.00-------------------------------------------
........................................................................................................................................................................................................TGGGCCTGGAGCGTCGTATG...............................................................................201.000.00---------------------------1.00---------------------
.................................GACTCCAAGATCACCCCG........................................................................................................................................................................................................................................................181.000.00-------------------------1.00-----------------------
..........................................................................................................................................................................................................GGCCTGGAGCGTCGGGCC...............................................................................181.000.00-----------------------1.00-------------------------
.............................................................................................................................................................................................................................................................CTCAAAGACTCGCTGGGC............................1811.001.00------------1.00------------------------------------
...........................................................................................................................................................................................................GCCTGGAGCGTCGGGCCCC.............................................................................1911.005.001.00------------------------------------------------
..............................................................................................................................................................................................................TGGAGCGTCGGGGCC..............................................................................1521.001.00-0.50--------------------------------------------0.50--
......................................................................................CGGGGAGGCGGGGAGTGA...................................................................................................................................................................................................181.000.00---------------------------------1.00---------------
.............................................................................................................................................................................................................CTGGAGCGTCGGGGCCAT............................................................................181.000.00----------------------------------------1.00--------
.......................................................................................................................................................................................................................................TCCCCCTCGCGCCCTTCC..................................................181.000.00--------------------------1.00----------------------
.............................................................................................................................................................................................................CTGGAGCGTCGGGGCCATAC..........................................................................201.000.00------1.00------------------------------------------
..............................................................................................................................................................................................................TGGAGCGTCGGGGCCCT............................................................................171.000.00------------------------------------1.00------------
.............................................................................................................................................................................................................CTGGAGCGTCGGGGCCATA...........................................................................191.000.00----------------------1.00--------------------------
............................................................................................................................................GAGGTCTCCAGCCCAAGCC............................................................................................................................................191.000.00------------------------1.00------------------------

Antisense strand
CCTCAGCGCCGGGGCAGCCACATACCCTACCGCGACTCCAAGATCACCCGGTGAGCTGCCCCCTGGCTCCTATGTGGCCTGGGGGCCGGGGAGGCGGGGAGTGTCCAGCACACCAGTGGGGGTGGAAGCCCAGGTCCCCTGAGGTCTCCAGCCCACGGGAACCGCGCCAGGAGCCGGTCCCAGGTCTGGCCCGCTGGCCCTGGGCCTGGAGCGTCGGGGCCCCTGAGAGCCTCCCCCTCGCGCCCTCAGGATCCTCAAAGACTCGCTGGGCGGGAACGCCAAGACGGTGATGATCGCCT
.................................................................................((((((((...((((.((.(((.....))).((.((.(((.((((..((((((...)))).))..)))).))))).))..)).)))).((.(((((........))))))).))))))))((((((.((...)).)))))).............................................................................
.................................................................................82..............................................................................................................................................226.......................................................................
SizePerfect hitTotal NormPerfect NormSRR038852(GSM458535)
QF1160MB. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040006(GSM532891)
G601N. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577579(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
.......................................................................................................................................................................................................................................................................ATCACCGTCTTGGCGTTCCCGCCCAGCG........ 2811.001.00-----------------------------1.00-------------------
....................................................................................................................................................................CGCCAGGAGCCGGTCTACG.................................................................................................................... 191.000.00-1.00-----------------------------------------------
............................................................................................................................GAAGCCCAGGTCCCCGTGT............................................................................................................................................................ 191.000.00-------------------------------------1.00-----------
....................................................................................GCCGGGGAGGCGGGGAGAC.................................................................................................................................................................................................... 191.000.00-------------------1.00-----------------------------
.....................................................................................................................................................................GCCAGGAGCCGGTCCTGGC................................................................................................................... 191.000.00------------------------------1.00------------------
...............................................................................CCGCCTCCCCGGCCCCCA.......................................................................................................................................................................................................... 1820.500.50--------------------------------------------0.50----
..............................................................................................................................................................................................................................................................CCAGCGAGTCTTTGA.............................. 1520.500.50------------------------------------------0.50------
................................................................................................................................................................................................................................GAGGGGGAGGCTCTC............................................................ 1580.380.38------------------------------------------0.38------
........................................................................................................................................................................................................................................GAGGGCGCGAGGGGG.................................................... 1530.330.33------------------------------------------------0.33