ID: uc002bgc.2_intron_10_0_chr15_81582387_f
GENE: IL16(11)
chr15:81582337-81582843+


(1)
AGO2.ip 		(1)
BRAIN 		(5)
BREAST 		(7)
CELL-LINE 		(4)
CERVIX 		(5)
HEART 		(3)
LIVER 		(1)
OTHER 		(12)
SKIN

Sense strand
TGACTCTAGGACTCATACTCTTAACTATTACTCCAAAGTGATAATAAACTGTGAGTCACAGCTCAGACAGTATAATAGTGATTGTGATTATTACGATATTGTTGATAATGATGATGTCATGACAGCATTGCCAAGAACGGACTAGCTCATAGAGATAACCTATGAAGTGGTAACTTTGCCTAGAATTTTCCAGCAAGTAGTGGGGAGAAGGTTGGAGAGTTGAGGGGGCCTCCTTGGGAACCCCTGCATTGATAGACTTTGGACTTTATCTAGAAGATACTGAGGAACCATTGATTCCCGGGGTATTTCTGGAAATGGAATTCATCAGCTATTTGCAGAGTGGGTTGAAATAAAATAATTTAGAATCCAGTGGCCCAGCTTTGGAGCTGGTACGGGGCTGGGAGCCTGATGCAGGAGCTTCTACTGTTTGTTTGAGGAGATGACTGATATTTTCTAGGTCTCTGAACAGCAACTCAAAGAAGCTGTGGCCCAGGCTGTGGAAAACAC
.............................................................................................................................................................................................................................................................................(((((((((((((.((((.......)))))))..(((((((..(((..((.......((((.((((((...((((((.((((......))))..))))))..((((((((((((.........)))))))))..)))...)))))))))).......))..)))..))))))).....))))))))))..................................................
..........................................................................................................................................................................................................................................................................267...........................................................................................................................................................................................457................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR189782SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040037(GSM532922)
G243T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTGATATTTTCGCT..................................................19271.000.00214.0027.0017.006.003.004.00-----------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTGATATTTTCGCTA.................................................2013.000.007.003.002.001.00-------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTGATATTTTCGC...................................................187.000.005.001.00--1.00------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTGATATTTTCG....................................................176.000.006.00----------------------------------------
...............................................................................................................................................................................................................................................................................AGAAGATACTGAGGAACATA........................................................................................................................................................................................................................205.000.00---------2.00----------------1.00--1.00-1.00---------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGGTCTCTGAACTCTG....................................194.000.00----------2.001.00---1.00-------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTGATATTTTCTCT..................................................193.000.002.00--1.00-------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGTTTGTTTGAGGAGATGAC...............................................................2312.002.00-----------1.00-1.00---------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGCTGTGGCCCAGGCTGTGGAAAACA.3012.002.00-------2.00---------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTGATATTTTCGCT..................................................182.000.002.00----------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTGATATTTTCGTT..................................................192.000.001.001.00---------------------------------------
..........................................................................................................................................................................................................................................................................................AGGAACCATTGATTCAGG...............................................................................................................................................................................................................181.000.00-----------------------1.00-----------------
.....................................................................................................................................................................................................................................................................................................................................CAGCTATTTGCAGAGTGGG...................................................................................................................................................................1911.001.00------------------------1.00----------------
..................................................................................................................................................................................................................GTTGGAGAGTTGAGGGGTTGG....................................................................................................................................................................................................................................................................................211.000.00-------------------------1.00---------------
...........................................................................................................................................................................................................GGAGAAGGTTGGAGACGT..............................................................................................................................................................................................................................................................................................181.000.00------------1.00----------------------------
.............................................................................................................................CATTGCCAAGAACGGACTAGCTC.......................................................................................................................................................................................................................................................................................................................................................................2311.001.00----------------------1.00------------------
........................................................................................................................................................................................................TGGGGAGAAGGTTGGTA..................................................................................................................................................................................................................................................................................................171.000.00------------------------------1.00----------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGCTGTGGAAAATCTC191.000.00--------1.00--------------------------------
.........................................................................................................................................................................................................................................................................................GAGGAACCATTGATTCGAAC..............................................................................................................................................................................................................201.000.00----------------------------1.00------------
................................................................................................................................................................................................................................................................................GAAGATACTGAGGAAC...........................................................................................................................................................................................................................1621.001.00---------------------------------0.500.50------
...................................................................................................................................................................................................................................................CTGCATTGATAGACTCACT.....................................................................................................................................................................................................................................................191.000.00------------------1.00----------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTGATATTTTCGT...................................................181.000.001.00----------------------------------------
.........................................................................................................................................................................................................GGGGAGAAGGTTGGAACAC...............................................................................................................................................................................................................................................................................................191.000.00-------------------1.00---------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................GTACGGGGCTGGGAGCC.....................................................................................................1721.001.00--------1.00--------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCAAAGAAGCTGTGGCCCAGGCTGTGG.......2911.001.00---------------------------1.00-------------
...............................................................................................................................................................................................................AAGGTTGGAGAGTTG.............................................................................................................................................................................................................................................................................................1550.800.80--------------------------------0.80--------
.....................................................................................................................................................................................................................................................................................................................................................................................................GTACGGGGCTGGGAGC......................................................................................................1620.500.50-----------------------------------0.50-----
.................................................................................................................................................................................................................................................................................AAGATACTGAGGAAC...........................................................................................................................................................................................................................1590.220.22-------0.11-------------------------0.11-------
....................................................................................................................................................................................................................................................................................................................CTGGAAATGGAATTCAT......................................................................................................................................................................................1750.200.20--------------------------------------0.20--
...............................................................................................................................................................................................................AAGGTTGGAGAGTTGTGTG.........................................................................................................................................................................................................................................................................................1950.200.80---------------------------------------0.20-
.................................................................................................................................................................................................................................................................................AAGATACTGAGGAACAAAG.......................................................................................................................................................................................................................1990.110.22----------------------------------------0.11

Antisense strand
TGACTCTAGGACTCATACTCTTAACTATTACTCCAAAGTGATAATAAACTGTGAGTCACAGCTCAGACAGTATAATAGTGATTGTGATTATTACGATATTGTTGATAATGATGATGTCATGACAGCATTGCCAAGAACGGACTAGCTCATAGAGATAACCTATGAAGTGGTAACTTTGCCTAGAATTTTCCAGCAAGTAGTGGGGAGAAGGTTGGAGAGTTGAGGGGGCCTCCTTGGGAACCCCTGCATTGATAGACTTTGGACTTTATCTAGAAGATACTGAGGAACCATTGATTCCCGGGGTATTTCTGGAAATGGAATTCATCAGCTATTTGCAGAGTGGGTTGAAATAAAATAATTTAGAATCCAGTGGCCCAGCTTTGGAGCTGGTACGGGGCTGGGAGCCTGATGCAGGAGCTTCTACTGTTTGTTTGAGGAGATGACTGATATTTTCTAGGTCTCTGAACAGCAACTCAAAGAAGCTGTGGCCCAGGCTGTGGAAAACAC
.............................................................................................................................................................................................................................................................................(((((((((((((.((((.......)))))))..(((((((..(((..((.......((((.((((((...((((((.((((......))))..))))))..((((((((((((.........)))))))))..)))...)))))))))).......))..)))..))))))).....))))))))))..................................................
..........................................................................................................................................................................................................................................................................267...........................................................................................................................................................................................457................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR189782SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040037(GSM532922)
G243T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTGATATTTTCCG................................................... 188.000.006.001.00--1.00------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTGAGGAGATGAG............................................................... 171.000.00------1.00----------------------------------
.....................................................................................................................................AGAACGGACTAGCTCAGT.................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-----------------1.00-----------------------
................................................................................................................................................................................................................................................................................................................ATTTCTGGAAATGGACGTG........................................................................................................................................................................................ 191.000.00---------------------1.00-------------------
...........................................................................................................................................................................................................................................................................................................................................................AAATAAAATAATTTAGAAAAG........................................................................................................................................... 211.000.00------1.00----------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTGATATTTTCTCG.................................................. 191.000.001.00----------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCTGATGCAGGAGCTT....................................................................................... 191.000.00----------------1.00------------------------
.....................................................................................................................................AGAACGGACTAGCTCAATAC.................................................................................................................................................................................................................................................................................................................................................................. 201.000.00------1.00----------------------------------
....................................................GAGTCACAGCTCAGACGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00--------------------1.00--------------------
.........................................................................................................................................................................................................................AGTTGAGGGGGCCTCATAG............................................................................................................................................................................................................................................................................... 191.000.00--------------1.00--------------------------
...................................................................................................................................................TAGGTTATCTCTATG......................................................................................................................................................................................................................................................................................................................................................... 1580.250.25------------------------------------0.25----
.......................................................................................................................................................................................................................................................................................................................................................AATTATTTTATTTCAAC................................................................................................................................................... 1740.250.25-------------------------------------0.25---
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGAGTTGCTGTT........................... 1680.120.12------------------------------------0.12----