ID: uc002bal.2_intron_0_0_chr15_75761325_r.3p
GENE: (12)
chr15:75761275-75761524-


(1)
AGO1.ip
(2)
AGO2.ip
(2)
B-CELL
(3)
BRAIN
(2)
BREAST
(10)
CELL-LINE
(4)
CERVIX
(2)
HEART
(1)
OTHER
(1)
RRP40.ip
(5)
SKIN
(1)
TESTES

Sense strand
TAAGAGGCCTTCTCATTTCTCTGGCCTCCAACACTCCCTGTGACCTCCTTCTTGAGTCCTTTCAGGCCTAAGGCCACCTGGCCTTCTGCCATGAGGCACTTTGCCTGTGAAGTCATTCATTCAGTTCTGCCTGGGTTATTTGGTAGAGGGAGGAAGAGAAGAGAGGTAAACCAGATGTGATCACTTCCTTCCTTCTTCAGGTACCTTCTGCTCACTGGACATCTGCCTGGCACAGCTGGAGGAGCTTGGC
.................................................................................................................................................(((((((((((.((((...((....)).(((...))).)))))))))))))))....................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR040025(GSM532910)
G613T. (cervix)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040028(GSM532913)
G026N. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040033(GSM532918)
G603T. (cervix)
SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................................................................................................................................TCACTTCCTTCCTTCTTCAG..................................................20123.0023.0022.00-------------------------1.00------
...............................................................................................................................................TAGAGGGAGGAAGAGAAGAGAGG....................................................................................2319.009.00-9.00-------------------------------
....................................................................................................................................................................................TCACTTCCTTCCTTCTTCAGA.................................................2119.0023.006.00----2.00----------------------1.00----
...............................................................................................................................................TAGAGGGAGGAAGAGAAGAGAG.....................................................................................2212.002.00----2.00----------------------------
..........................................................................................................................................................................................................ACCTTCTGCTCACTGGACATCTGCCTGGC...................2911.001.00--------------1.00------------------
...............................................................................................................................................TAGAGGGAGGAAGAGAAGAGAGT....................................................................................2311.002.00-1.00-------------------------------
.........................................................................................................................................................................................................................................AGCTGGAGGAGCTTGGC1711.001.00-----------------1.00---------------
....................................................................................................................................................................................................................CACTGGACATCTGCCTGGC...................1911.001.00--------1.00------------------------
....................................................................................................................................................................................TCACTTCCTTCCTTCTTCCA..................................................201.000.00---1.00-----------------------------
...............................................................................................................................................................................TGTGATCACTTCCTTCCTTCTTCAG..................................................2511.001.00------------1.00--------------------
................................................................................................................................................................................................................................GCCTGGCACAGCTGGTTCG.......191.000.00------------------------1.00--------
...............................................................................................................................................TAGAGGGAGGAAGAGAAGAGAGGTAT.................................................................................261.000.001.00--------------------------------
.........................................................................................................................................................................................................................................AGCTGGAGGAGCTTGGTGTG201.000.00-------------------------1.00-------
..................................................................................................................................................................................................................................CTGGCACAGCTGGAGGAGC.....1911.001.00----------1.00----------------------
...........................................................................................................................................TTGGTAGAGGGAGGAGTGT............................................................................................191.000.00---------------------------1.00-----
....................................................................................................................................................................................................................................GGCACAGCTGGAGGACAA....181.000.00--1.00------------------------------
....................................................................................................................................................................................................................................GGCACAGCTGGAGGACAAT...191.000.00--1.00------------------------------
........................................................................................................................................................................................................................................CAGCTGGAGGAGCTTGGC1811.001.00----------------------1.00----------
....................................................................................................................................................................................TCACTTCCTTCCTTCTTCAA..................................................201.000.001.00--------------------------------
....................................................................................................................................................................................TCACTTCCTTCCTTCTTCAGT.................................................2111.0023.00-----------1.00---------------------
....................................................................................................................................................................................TCACTTCCTTCCTTCTTACA..................................................201.000.00---1.00-----------------------------
.....................................................................................................................................................................................................................ACTGGACATCTGCCTGGCA..................1911.001.00-------------------1.00-------------
...............................................................................................................................................TAGAGGGAGGAAGAGAAGAG.......................................................................................2011.001.00---------------------1.00-----------
.......................................................................................................................................................................................................................................ACAGCTGGAGGAGCTATA.181.000.00--------------------1.00------------
.......................................................................................................................................................................................................................TGGACATCTGCCTGGCACAGCTGGAGGAGC.....3011.001.00------1.00--------------------------
.............CATTTCTCTGGCCTCC.............................................................................................................................................................................................................................1650.200.20-------------------------------0.20-
...................................................................................................................................................................................................................TCACTGGACATCTGC........................1590.110.11--------------------------------0.11

Antisense strand
TAAGAGGCCTTCTCATTTCTCTGGCCTCCAACACTCCCTGTGACCTCCTTCTTGAGTCCTTTCAGGCCTAAGGCCACCTGGCCTTCTGCCATGAGGCACTTTGCCTGTGAAGTCATTCATTCAGTTCTGCCTGGGTTATTTGGTAGAGGGAGGAAGAGAAGAGAGGTAAACCAGATGTGATCACTTCCTTCCTTCTTCAGGTACCTTCTGCTCACTGGACATCTGCCTGGCACAGCTGGAGGAGCTTGGC
.................................................................................................................................................(((((((((((.((((...((....)).(((...))).)))))))))))))))....................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR040025(GSM532910)
G613T. (cervix)
SRR029130(GSM416759)
DLD2. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040028(GSM532913)
G026N. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040033(GSM532918)
G603T. (cervix)
SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................................................................................................................................................................TACCTTCTGCTCACTGGGGG............................. 201.000.00------------------1.00--------------
..............................................................................TGGCCTTCTGCCATGATC.......................................................................................................................................................... 181.000.00---------------1.00-----------------
............................................................................CCTGGCCTTCTGCCAACTC........................................................................................................................................................... 191.000.00---------1.00-----------------------
.................................................................................................................................CCTGGGTTATTTGGTATCG...................................................................................................... 191.000.00-----------------------1.00---------
.......................................................................................................................................................................................CTTCCTTCCTTCTTCAAGG................................................ 191.000.00----------------1.00----------------
....................................CCTGTGACCTCCTTCTTGCTT................................................................................................................................................................................................. 211.000.00-------1.00-------------------------
.................................CTCCCTGTGACCTCCCG........................................................................................................................................................................................................ 171.000.00-------------1.00-------------------
...............................AGGAGGTCACAGGGAGTG......................................................................................................................................................................................................... 1820.500.50------------------------------0.50--
...........................................AAGGACTCAAGAAGGAGG............................................................................................................................................................................................. 1820.500.50-----------------------------0.50---
...............................................................................................................................................................................................................ATGTCCAGTGAGCAG............................ 1590.220.22------0.22--------------------------