ID: uc002avp.2_intron_2_0_chr15_73617537_r
GENE: (5)
chr15:73617487-73617688-


(1)
AGO2.ip 		(1)
B-CELL 		(1)
BRAIN 		(8)
BREAST 		(5)
CELL-LINE 		(2)
CERVIX 		(4)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(6)
SKIN

Sense strand
TGTTCGACGAGGAGAGCATCCTGGGCGAGCTAAGCGAGCCCCTGCGGGAGGTGAGCTGTGTGGCGGCCCGGCGTGGAGGGGAGCCAGGCCTTCCTGGCAGCCAGCTCCCCTCACCACCTCCTTCCCGTGTCCCAATCCACCCTGTCCGGCAGGAGATCATCAACTTTAACTGTCGGAAGCTGGTGGCCTCCATGCCACTGTT
....................................................((((((..((((..(((........)))..)))).(((.....)))...))))))...............................................................................................
..................................................51......................................................107.............................................................................................
SizePerfect hitTotal NormPerfect NormSRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040008(GSM532893)
G727N. (cervix)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM532876(GSM532876)
G547T. (cervix)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........................................................GTGGCGGCCCGGCGTCCGG............................................................................................................................19154.004.0032.0010.00--3.002.00------1.00--1.00---1.00---1.00-1.001.001.00-
...........................................................GTGGCGGCCCGGCGTC...............................................................................................................................1617.004.00--6.001.00-------------------------
...........................................................GTGGCGGCCCGGCGTCC..............................................................................................................................1715.004.00--2.001.00--1.00-----------------1.00----
...........................................................GTGGCGGCCCGGCGT................................................................................................................................1514.004.00--1.001.00-1.00------------1.00----------
...........................................................GTGGCGGCCCGGCGTCCG.............................................................................................................................1814.004.00--------2.00-1.001.00-----------------
.............................................................................................................................................................................CGGAAGCTGGTGGCCATCG..........194.000.00-------2.00--1.00--1.00---------------
.............................................................................GGGGAGCCAGGCCTTAAAG..........................................................................................................191.000.00----------------------------1.00
...........................................................GTGGCGGCCCGGCGTGCGG............................................................................................................................191.000.00--------------1.00--------------
...........................................................GTGGCGGCCCGGCGTCCT.............................................................................................................................1811.004.00------1.00----------------------
.....GACGAGGAGAGCATCGAG...................................................................................................................................................................................181.000.00-----------1.00-----------------
.........................................................GTGTGGCGGCCCGGCGG................................................................................................................................171.000.00----------------------1.00------
....................................................................................................................................................................TTTAACTGTCGGAAGCTGGTGGCCTCTG..........281.000.00---1.00-------------------------
...........................................................................................TCCTGGCAGCCAGCTCCGAGC..........................................................................................211.000.00---------------------1.00-------

Antisense strand
TGTTCGACGAGGAGAGCATCCTGGGCGAGCTAAGCGAGCCCCTGCGGGAGGTGAGCTGTGTGGCGGCCCGGCGTGGAGGGGAGCCAGGCCTTCCTGGCAGCCAGCTCCCCTCACCACCTCCTTCCCGTGTCCCAATCCACCCTGTCCGGCAGGAGATCATCAACTTTAACTGTCGGAAGCTGGTGGCCTCCATGCCACTGTT
....................................................((((((..((((..(((........)))..)))).(((.....)))...))))))...............................................................................................
..................................................51......................................................107.............................................................................................
SizePerfect hitTotal NormPerfect NormSRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040008(GSM532893)
G727N. (cervix)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM532876(GSM532876)
G547T. (cervix)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................................................................................ACCACCTCCTTCCCGC.......................................................................... 162.000.00---------2.00-------------------
........................................................................................................................................................................................GGCCTCCATGCCACTGCGG 191.000.00--------------------1.00--------
..................................................................CCCGGCGTGGAGGGGGGGG..................................................................................................................... 191.000.00----------------1.00------------
..................................................................CCCGGCGTGGAGGGGGG....................................................................................................................... 171.000.00-----------------1.00-----------