ID: uc002ask.2_intron_4_0_chr15_70347025_r
GENE: TLE3(13)
chr15:70346975-70347437-


(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(1)
AGO3.ip 		(10)
B-CELL 		(13)
BRAIN 		(14)
BREAST 		(26)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(3)
HELA 		(1)
KIDNEY 		(7)
LIVER 		(7)
OTHER 		(12)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ACATCAGCCAGCCAGGCAGCAAGAGCCCCATCTCCCAGCTGGACTGCCTGGTGAGAATCCCAGGGCTGCTGCGCCGCCTCCAGCTGGTGTAGGAGGATGGGGCAGCCTGGGCCACAGGGGAGAGCCCCAGGGCCTGGCTCAGCATCGTATTGGCTGAGCAACTTTAGGCAAGCTGACTAACCTCTCTGAGCCTCAGTTGTGCCTTCTGTGTGTGGGGCTGATTCTGACCTCCTGGTATTCATGAAAGATCAAAGGGTTGTGAATTTGAGGAATGGGGACAGCCTGGCAGCTGCTGGGTATAGGGGGAGGCTGTAAGCAGGACTGGTGAGGGTGCTCGGTGTTGCTGGACAGGACTCTCCTGGTGCCCAGGAGGGGAAGTAGGCAGCACTCAGCCCTGCCCCTTCTCCCTCCAGAACAGGGACAATTACATCCGCTCCTGCAAGCTGCTCCCTGATGGGCGCAC
..............................................................................................................................................................................................................................................................................................................................(((..((.(((((((((.(((((((((..((....(((((((((...)))))))))...)).))))))))).)))...))))..)).)).)))....................................................
.........................................................................................................................................................................................................................................................................................................................314................................................................................................413................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189786SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189787SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577590(Rovira)
total RNA. (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR038855(GSM458538)
D10. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189783SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR343335
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACTCAG.......................................................................25120.0020.008.004.00-3.002.00------------------------------1.00--------------------------------1.00-----------------------1.00-----
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACTCA........................................................................24119.0019.003.006.00-3.00--4.00---------------1.00-------------------------------------1.00---------------------1.00---------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCA............................................................................20110.0010.00---3.001.00------------------1.00---2.00---1.00-1.00-1.00--------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCA............................................................................2119.009.00---------------1.00-----2.001.00------2.00------------------2.00-1.00-----------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACTC.........................................................................2319.009.001.00---1.00------------------1.00-----------------1.00---1.00-----------1.00-------------1.00------1.00-----1.00-------------
........................................................................................................................................................................................................................................................................................................................................................TGGACAGGACTCTCCTGGTGCCCAGGAGGGGAAGTAGGCAGCACTCAGCCCTGCCCCTTCTCCCTCCAGT.................................................705.000.00------------5.00-------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACT..........................................................................2214.004.00--2.001.00----------------------------------------------------------------------------------1.00-----------
.............................................................................................................................................................................................................................................................................................................................................................................CCAGGAGGGGAAGTAGGCAG..............................................................................2014.004.00--4.00-----------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGACAATTACATCCGCT............................1914.004.00------------------4.00-------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CCAGGAGGGGAAGTAGGCAGCAA...........................................................................234.000.00-3.00--------------------------------------------1.00---------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CCAGGAGGGGAAGTAGGCAGC.............................................................................2113.003.00--3.00-----------------------------------------------------------------------------------------------
.............................ATCTCCCAGCTGGACTGCCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................223.000.00--------3.00-----------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................AGGGGAAGTAGGCAGCACTCAG.......................................................................2213.003.00--------------------------3.00-----------------------------------------------------------------------
.....................AGAGCCCCATCTCCCAGCTGGACTGCCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................293.000.00-------3.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACCC.........................................................................2313.001.00-----2.00------------------1.00-------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCATC..........................................................................2313.009.00-------------------------3.00------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CCAGGAGGGGAAGTAGGCAGCACCCAG.......................................................................2713.002.00-----3.00--------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCAC...........................................................................2213.003.00----2.00------------------------------------------------------1.00--------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................CCCAGGAGGGGAAGTAGGCAG..............................................................................2113.003.00--------1.00----------------------------------2.00------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAG..............................................................................1813.003.00----2.00------------------1.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACCA.........................................................................2313.001.00-----2.00--------------------------1.00-----------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CCAGGAGGGGAAGTAGGCAGCAC...........................................................................2312.002.00---------------1.00-----------------------------------1.00----------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACTCAGCC.....................................................................2712.002.00-1.00---------------------------------------------------------------------------1.00--------------------
.......................................................................................................AGCCTGGGCCACAGGGGTCGG...................................................................................................................................................................................................................................................................................................................................................212.000.00--1.00---------------------------------1.00-------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................GTAAGCAGGACTGGTGAT......................................................................................................................................182.000.00-2.00------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................GAGGGGAAGTAGGCAGCACTCAG.......................................................................2312.002.00---------------1.00------------------------------------------------------------1.00---------------------
.............................................................................................................................................................................................................................................................................................................................................................................CCAGGAGGGGAAGTAGGCAGCACCC.........................................................................2512.002.00-----2.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................AAGCAGGACTGGTGATGTG...................................................................................................................................192.000.00---------------------1.00-------1.00--------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCCCTTCTCCCTCCAGT.................................................2112.001.00--------------------------------------1.00-------------------------1.00---------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCAAT..........................................................................2312.009.00----1.00----------------------------1.00----------------------------------------------------------------
....................................................................................TGGTGTAGGAGGATGTTT.........................................................................................................................................................................................................................................................................................................................................................................182.000.00--------------2.00-----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACTCAGT......................................................................2612.0020.00------1.00---------------------------------1.00---------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TAAGCAGGACTGGTGATGT....................................................................................................................................192.000.00--------2.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCACT..........................................................................2312.002.00---1.00---------------------------------1.00------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CCAGGAGGGGAAGTAGGCAGCAG...........................................................................232.000.00----------------------------2.00---------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACTCAGC......................................................................2612.002.00----1.00--------------------------------------------1.00------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCATT..........................................................................2311.009.00------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGAAA...........................................................................2111.003.00-------------------------------------1.00------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCTCAG.........................................................................231.000.00-----1.00--------------------------------------------------------------------------------------------
................................................................GCTGCTGCGCCGCCTCCTGCC..........................................................................................................................................................................................................................................................................................................................................................................................211.000.00-------------------------------1.00------------------------------------------------------------------
...................................CAGCTGGACTGCCTGGAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------------------------------------------------------------------1.00------------------
...........................................................................................................................................................................................................................................................................................................TAGGGGGAGGCTGTAAGCAGGA..............................................................................................................................................2211.001.00-------------------------------------------------------------------1.00------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCCCTTCTCCCTCCAG..................................................2011.001.001.00-------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................TCTGTGTGTGGGGCTGATTCTGACCTCCCGG....................................................................................................................................................................................................................................311.000.00-------1.00------------------------------------------------------------------------------------------
...TCAGCCAGCCAGGCAGCAAGAGCCCCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................281.000.00-------1.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CCAGGAGGGGAAGTAGGCAGCAAG..........................................................................241.000.00----------------------------------------1.00---------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGGACAATTACATCCTCG............................221.000.001.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................GAGGGGAAGTAGGCAGCACTA.........................................................................211.000.00---------------------------------------------------------------------------------------1.00----------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCACTC.........................................................................2411.001.00-----------------------------------------1.00--------------------------------------------------------
...................................................................................................................AGGGGAGAGCCCCAGGG...........................................................................................................................................................................................................................................................................................................................................1711.001.00-----------------------------------------------------1.00--------------------------------------------
............CAGGCAGCAAGAGCCCCATCTCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------------------------1.00------
........................................................................................................................................................................................................................................................................................................................TAAGCAGGACTGGTGATG.....................................................................................................................................181.000.00-1.00------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGC................................................................................1711.001.00----------------------------------------------------1.00---------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACAT.........................................................................2311.001.00-1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................GTGCTCGGTGTTGCTGGACAGG...............................................................................................................2211.001.00--------------------------------------------------------------1.00-----------------------------------
...........................................................................................................................................CAGCATCGTATTGGCTGAGCAACTTTAGG.......................................................................................................................................................................................................................................................................................................2911.001.00--------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................TAGGGGGAGGCTGTAAGCAGGACTAT..........................................................................................................................................261.000.00----------------------------------------------------------------------------------------1.00---------
..........................................................................................................................................................................................................................................................................................................................AGCAGGACTGGTGAGGGTGATG...............................................................................................................................221.000.00--------------------------------1.00-----------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCACTCAGC......................................................................2711.001.00------------------------------------1.00-------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCACA..........................................................................2311.003.00---------------------------1.00----------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCCGCTCCTGCAAGCTGCT...............2211.001.00---------------------------------------------------------------1.00----------------------------------
.......................................................................................................AGCCTGGGCCACAGGGGGCGG...................................................................................................................................................................................................................................................................................................................................................211.000.00--1.00-----------------------------------------------------------------------------------------------
.................................................................................AGCTGGTGTAGGAGGATGGGGCC.......................................................................................................................................................................................................................................................................................................................................................................231.000.00---------------1.00----------------------------------------------------------------------------------
.............................ATCTCCCAGCTGGACTGCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-------------------------------1.00------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................GAGGGGAAGTAGGCAGCACTCAGCC.....................................................................2511.001.00----------------------------1.00---------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................ATGGGGACAGCCTGGCAGCTGCCGGG......................................................................................................................................................................261.000.00-------1.00------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................GCCCAGGAGGGGAAGTAGGCAG..............................................................................2211.001.00-----------------------------------------------------------------------------------1.00--------------
............................................................................................GAGGATGGGGCAGCCAGA.................................................................................................................................................................................................................................................................................................................................................................181.000.00----------------1.00---------------------------------------------------------------------------------
.........................................................................................................................................................CTGAGCAACTTTAGGCAAGCTGAC..............................................................................................................................................................................................................................................................................................2411.001.00---------------------------------------------------------------------1.00----------------------------
................................................TGGTGAGAATCCCAGGGCTGCTGCGCCTCC.................................................................................................................................................................................................................................................................................................................................................................................................301.000.00------------------------------------------------------------------------1.00-------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGAAA...........................................................................221.000.00------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAAT.............................................................................191.000.00--------1.00-----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACATCCGCTCCTGCAAGCTGCTCCCTG..........3011.001.00-------1.00------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCCGCTCCTGCAAGCTGCTCCCCG..........271.000.00--------------------------------------------1.00-----------------------------------------------------
..........................................................................................................................................................................AGCTGACTAACCTCTCTGA..................................................................................................................................................................................................................................................................................1911.001.00---------------------------------------------------------------------------1.00----------------------
.................................................................................AGCTGGTGTAGGAGGATGGGGCA.......................................................................................................................................................................................................................................................................................................................................................................2311.001.00---------------1.00----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCAA...........................................................................2211.009.00---1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGAA............................................................................211.000.00-1.00------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCAC...........................................................................2111.001.00------1.00-------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCACTCA........................................................................2511.001.00---1.00----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTACATCCGCTCCTGT.......................191.000.00--------------------------------------------------------1.00-----------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACTA.........................................................................2311.004.00---1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGCAAGA.........................................................................2411.009.00------1.00-------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................CCCAGGAGGGGAAGTAGGCAGCAC...........................................................................2411.001.00--------1.00-----------------------------------------------------------------------------------------
.....................AGAGCCCCATCTCCCAGCTGGACTGCCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................291.000.00-------1.00------------------------------------------------------------------------------------------
.......................................................................................TGTAGGAGGATGGGGCAGCCTGGGCC..............................................................................................................................................................................................................................................................................................................................................................2611.001.00--------------------------------------------1.00-----------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CCAGGAGGGGAAGTAGGCAGCACTC.........................................................................2511.001.00--1.00-----------------------------------------------------------------------------------------------
..............................................................................................................GCCACAGGGGAGAGCCTCGT.............................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------------------------1.00-------------------------------------------
...............................................................................................................................................................................................................GTGTGTGGGGCTGATTAGGT............................................................................................................................................................................................................................................201.000.00---------------------------------------1.00----------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................TAGGGGGAGGCTGTAAG...................................................................................................................................................1711.001.001.00-------------------------------------------------------------------------------------------------
.............AGGCAGCAAGAGCCCCATCTCCCAGCTGGACCG.................................................................................................................................................................................................................................................................................................................................................................................................................................331.000.00---------------------------------------------------------------------------------------------1.00----
................................................................................................................................................................................................................................................................................................................................................................................................GCACTCAGCCCTGCCCCTTCTCCCTCCAGAAC...............................................3211.001.00---------------------------------------------------------------------------------1.00----------------
........................................................................................................................................................................................................................................................................................................................TAAGCAGGACTGGTGATGC....................................................................................................................................191.000.00------------------------------------------1.00-------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CCAGGAGGGGAAGTAGGCAGCACTCAGCCCTGCCCCTTCTCCCTCCAG..................................................4811.001.00------------1.00-------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACCCA........................................................................2411.001.00---1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGT.............................................................................201.000.00-------------1.00------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TGGGGCTGATTCTGACCTCCTGG....................................................................................................................................................................................................................................2311.001.00-------------------------------------------------------1.00------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AGGAGGGGAAGTAGGCAGCACTCAT.......................................................................2511.0019.00----------------------------------------------1.00---------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................GCCCAGGAGGGGAAGTTGG.................................................................................191.000.00---------------------------------------1.00----------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCCCTTCTCCCTCCAGA.................................................2111.001.001.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................TGTGAATTTGAGGAATGGGGACAGC.....................................................................................................................................................................................2511.001.00--1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................CAGGAGGGGAAGTAGGCAGC.............................................................................2011.001.00--1.00-----------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................CCAGGAGGGGAAGTAGGCAA..............................................................................201.000.00----1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................CTGTAAGCAGGACTGGTGAGGG....................................................................................................................................2211.001.00-----------------------------------------------------------------1.00--------------------------------
...............................................................................................................................................................................................................................................................GTTGTGAATTTGAGGAATGGGGACAGC.....................................................................................................................................................................................2711.001.00------------------------------------------------------------------1.00-------------------------------
....................................................................................................................................................................................................................................................................................................CTGGGTATAGGGGGACGG.........................................................................................................................................................181.000.00--------------------------------------1.00-----------------------------------------------------------
..................................................................................................................................................................................................................TGTGGGGCTGATTCTG.............................................................................................................................................................................................................................................1630.330.33-----------------------------------------------------------------------------------------------0.33--
.................................................................................................................................................................................................................................................................................................................................................................................................CACTCAGCCCTGCCCCT.............................................................1740.250.25------------------------------------------------------------------------------------------------0.25-

Antisense strand
ACATCAGCCAGCCAGGCAGCAAGAGCCCCATCTCCCAGCTGGACTGCCTGGTGAGAATCCCAGGGCTGCTGCGCCGCCTCCAGCTGGTGTAGGAGGATGGGGCAGCCTGGGCCACAGGGGAGAGCCCCAGGGCCTGGCTCAGCATCGTATTGGCTGAGCAACTTTAGGCAAGCTGACTAACCTCTCTGAGCCTCAGTTGTGCCTTCTGTGTGTGGGGCTGATTCTGACCTCCTGGTATTCATGAAAGATCAAAGGGTTGTGAATTTGAGGAATGGGGACAGCCTGGCAGCTGCTGGGTATAGGGGGAGGCTGTAAGCAGGACTGGTGAGGGTGCTCGGTGTTGCTGGACAGGACTCTCCTGGTGCCCAGGAGGGGAAGTAGGCAGCACTCAGCCCTGCCCCTTCTCCCTCCAGAACAGGGACAATTACATCCGCTCCTGCAAGCTGCTCCCTGATGGGCGCAC
..............................................................................................................................................................................................................................................................................................................................(((..((.(((((((((.(((((((((..((....(((((((((...)))))))))...)).))))))))).)))...))))..)).)).)))....................................................
.........................................................................................................................................................................................................................................................................................................................314................................................................................................413................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189786SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189787SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577590(Rovira)
total RNA. (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR038855(GSM458538)
D10. (cell line)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189783SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR343335
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGCTGCTCCCTGAAGGT..... 2211.000.00---------1.002.001.00-2.00--1.00--1.001.00-------------1.00------------1.00--------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTGCTCCCTGATAGG..... 217.000.00---------1.001.001.00--1.00--1.00------------1.00---1.00---------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGCTGCTCCCTGAACGT..... 224.000.00----------1.00--1.00-----1.00-----------------------------------------------------1.00------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGCTGCTCCCTGAAGTT..... 223.000.00----------------1.002.00--------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTGCTCCCTGATAC...... 203.000.00---------1.00-2.00--------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTGCTCCCTGACAGT..... 213.000.00-------------1.00-----1.00----1.00-------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTGCTCCCTGATAG...... 202.000.002.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTGCTCCCTGACACG..... 212.000.00---------1.001.00---------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGCTGCTCCCTGAACGA..... 222.000.00---------1.00---------1.00------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTGCTCCCTGAT........ 182.000.00---------1.00----------1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGCTGCTCCCTGAAGG...... 212.000.00---------1.00---------------------------------------------------1.00------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTGCTCCCTGATAGT..... 212.000.00--------------------1.00----------------------------------------------------------------1.00------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCTGCTCCCTGATAT...... 182.000.00--------------1.00-----1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTGCTCCCTTACA....... 191.000.00--------------------------------------------------------------------------1.00-----------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCTGCTCCCTGATGTT..... 191.000.00---------------------------------------------1.00----------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGAACAGGGACCTA...................................... 181.000.00----------------------------------------------------------------------1.00---------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGGAGCAGCTTGCAG......... 1811.001.00---------1.00----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCTGCTCCCTGACT....... 181.000.00----------1.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................CTGCCCCTTCTCCCTCTGG.................................................. 191.000.00----------------1.00---------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................GCAGCACTCAGCCCTG.................................................................. 161.000.00-------1.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGCCCCTTCTCCGG...................................................... 181.000.00--1.00-----------------------------------------------------------------------------------------------
..................................................................TGCTGCGCCGCCTCCAA............................................................................................................................................................................................................................................................................................................................................................................................ 171.000.00------------------------------------------1.00-------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCTGCTCCCTGATCT...... 181.000.00------------------------------1.00-------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCTGCTCCCTGATGTA..... 191.000.00--------------------------------------------------------------------------------1.00-----------------
...............GCAGCAAGAGCCCCATCTTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................... 221.000.00------------------------1.00-------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCTGCTCCCTGATCCA..... 191.000.001.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCAAGCTGCTCCCTGAGGT...... 221.000.00-----------------------------------------------1.00--------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTGCTCCCTGATGGC..... 211.000.00--------------1.00-----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCTGCTCCCTGATATA..... 191.000.00-----------1.00--------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................GCAGCACTCAGCCCTGGCG............................................................... 191.000.00----------------------------------------------------------1.00---------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGCTGCTCCCTGAATGT..... 221.000.00------------------------------1.00-------------------------------------------------------------------
.....................AGAGCCCCATCTCCCAGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00----------------------1.00---------------------------------------------------------------------------
.......................AGCCCCATCTCCCAGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00--1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTGCTCCCTGACAGG..... 211.000.00-----------------------------------------------------------------------------------------1.00--------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGCTGCTCCCTGAACG...... 211.000.00-----------1.00--------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCTGCTCCCTGATGC...... 181.000.00-----------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTGCTCCCTGATACT..... 211.000.00----------1.00---------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................AGCTGCCAGGCTGTCCCC............................................................................................................................................................................ 1830.670.67-------------------------------------------------0.33--------------------------------------------0.33---
.......................................................................................................................................................................................................................................................................................................................................................................CCCCTCCTGGGCACCA........................................................................................ 1620.500.50----------------------------------------------------------------------------------------------0.50---
..................................................................................................................................................................................................................................................................................AGCTGCCAGGCTGTCCC............................................................................................................................................................................ 1740.250.25-------------------------------------------------0.25------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TCCCCTCCTGGGCACC....................................................................................... 1660.170.17-------------------------------------------------------------------------------------------------0.17