ID: uc002ard.2_intron_2_0_chr15_68492020_r.5p
GENE: (1)
chr15:68497383-68497632-


(1)
AGO2.ip 		(2)
B-CELL 		(5)
BREAST 		(9)
CELL-LINE 		(1)
CERVIX 		(6)
HELA 		(2)
LIVER 		(5)
SKIN

Sense strand
GCGGTTCTGGGAGCAGCAAGCCCACGGGTAGCAGCCGAGGCCCCAGAATGGTGAGTGTGAGGGTCTGTGTCGGCCTGGCCAGGGCTGGGGGCGTGAACCTCAGGTGGAGCCCTCCCCTGACTGTTTTCCTTTCTCTGCTGCAGGCCAAGTTTCTTTCCCAAGACCAAATTAATGGTAGGTTGGGTTTGTTCTTTGATTAGCAACTCAGCAAAATATGGGTCTCATTAGGCAATTTGCTCTGCTCATGTTT
.....................................................................................................................((.((((...............))))..)).........(((((.((((......))))...)))))..................................................................
....................................................................................................................117.....................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................GTGAGTGTGAGGGTCTGTGTCGGCCTGGCCAGGGCTGGGGGCGTGAACCTCAGGTGGAGCCCTCCCCTGACTGTTTTCCTTTCTCTGCTGCAG...........................................................................................................93118.0018.009.007.002.00---------------------------
..................................................GTGAGTGTGAGGGTCTGTGTCGGCCTGGCCAGGGCTGGGGGCGTGAACCTCAGGTGGAGCCCTCCCCTGACTGTTTTCCTTTCTCTGCTGC.............................................................................................................9119.009.009.00-----------------------------
.....................................................................................................................................................................AAATTAATGGTAGGTTTTGT.................................................................207.000.00---3.00----2.00-------1.00-----1.00-------
.........................................................................................................................TGTTTTCCTTTCTCTGCTGCAGGC.........................................................................................................2412.002.00-----2.00------------------------
.............................................................................................................................................................CCAAGACCAAATTAATG............................................................................1712.002.00---------2.00--------------------
.....................................................................................................................................................................AAATTAATGGTAGGTTTATC.................................................................202.000.00------2.00-----------------------
..............................................................................................................................TCCTTTCTCTGCTGCAGGCCAAGCTTC.................................................................................................272.000.00----2.00-------------------------
.........................................................................CCTGGCCAGGGCTGGGGGTGG............................................................................................................................................................211.000.00-------------1.00----------------
............................................................................GGCCAGGGCTGGGGGCGTG...........................................................................................................................................................1911.001.00--------------------1.00---------
..................................................GTGAGTGTGAGGGTCTGTGTCGGCCTGGCAAAA.......................................................................................................................................................................331.000.00------------1.00-----------------
.....................................................AGTGTGAGGGTCTGTGTCGGCCTGGCCAGGGCTGGG.................................................................................................................................................................3611.001.00----------1.00-------------------
.CGGTTCTGGGAGCAGCAA.......................................................................................................................................................................................................................................1811.001.00--------------------------1.00---
..............................................................................................................................................................................GTAGGTTGGGTTTGTTCTTTGATTAGCA................................................2811.001.00-------------------1.00----------
................................................................................................................TCCCCTGACTGTTTTCCTTT......................................................................................................................2011.001.00--------------1.00---------------
..................................................................................................................................................AAGTTTCTTTCCCAAGACCAAA..................................................................................2211.001.00---------------1.00--------------
............................................................................................................................................................CCCAAGACCAAATTAATG............................................................................1811.001.00---------------------1.00--------
........................................................................................GGGCGTGAACCTCAGTGGT...............................................................................................................................................191.000.00-----------1.00------------------
........................................................................................GGGCGTGAACCTCAGTGG................................................................................................................................................181.000.00------------------------1.00-----
................................AGCCGAGGCCCCAGAGGCG.......................................................................................................................................................................................................191.000.00---------------------------1.00--
................................................................................................................................................................................AGGTTGGGTTTGTTCTTTTTGT....................................................221.000.00----1.00-------------------------
..................................................................................................................................................................................GTTGGGTTTGTTCTTTGATCAGC.................................................231.000.00-------1.00----------------------
...........................GTAGCAGCCGAGGCCCCAGAA..........................................................................................................................................................................................................2111.001.00-----------------1.00------------
......................................................GTGTGAGGGTCTGTGTCGGCCTGGCCAGGGCTGGGGGCGTGAACCTCAGGTGGAGCCCTCCCCTGACTGTTTTCCTTTCTCTGCTGCAG...........................................................................................................8911.001.00--1.00---------------------------
.................................GCCGAGGCCCCAGAATG........................................................................................................................................................................................................1711.001.00-----1.00------------------------
................................AGCCGAGGCCCCAGAATG........................................................................................................................................................................................................1811.001.00------------------1.00-----------
.............................................................................................................................TTCCTTTCTCTGCTGCAGGCCAAGTCTC.................................................................................................281.000.00-------1.00----------------------
.....................CCACGGGTAGCAGCCGAGGCCCCAGAATG........................................................................................................................................................................................................2911.001.00-----------------------1.00------
................................................................................................................TCCCCTGACTGTTTTCCTTTCTCTGCTGCAGGCCAAGTTTCTTTCCCAAGACCAAATTAATGGTAGGTTGGGTT................................................................7411.001.00----------------------------1.00-
..................................................................GTGTCGGCCTGGCCAGG.......................................................................................................................................................................1720.500.50-----------------------------0.50

Antisense strand
GCGGTTCTGGGAGCAGCAAGCCCACGGGTAGCAGCCGAGGCCCCAGAATGGTGAGTGTGAGGGTCTGTGTCGGCCTGGCCAGGGCTGGGGGCGTGAACCTCAGGTGGAGCCCTCCCCTGACTGTTTTCCTTTCTCTGCTGCAGGCCAAGTTTCTTTCCCAAGACCAAATTAATGGTAGGTTGGGTTTGTTCTTTGATTAGCAACTCAGCAAAATATGGGTCTCATTAGGCAATTTGCTCTGCTCATGTTT
.....................................................................................................................((.((((...............))))..)).........(((((.((((......))))...)))))..................................................................
....................................................................................................................117.....................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................................................................................................AAGTTTCTTTCCCAAGTA...................................................................................... 181.000.00-------------------------1.00----