ID: uc002amp.2_intron_10_0_chr15_63925011_r.5p
GENE: (67)
chr15:63925847-63926096-


(3)
BREAST 		(4)
CELL-LINE 		(17)
CERVIX 		(1)
HEART 		(1)
OTHER

Sense strand
ACTATGGAAAACTAGGCTTAGGAAATTCCACTGCAAAATCTTCACCTCAGGTCAGTACTGCCTTGAGTCTAGGTTTTCAGACAACATAAATAGTTTTCATCTATGTCAGTAGTTATTATTAGTTGGAAATAATTTACCTTTAGTACTTTTGGTAGTTCATAATGAAGTTTAGAAGCTTCTGTTGTGCATTCTTGAATGCCCACATGCTAGGTCTTGATTTTAAATAAGCTATTAATCCAGCTAAACTGGA
..........................................................................................................(((.((.(((((..((.((((.....)))).)).))))))).)))...................................................................................................
..........................................................................................................107....................................................162......................................................................................
SizePerfect hitTotal NormPerfect NormSRR040018(GSM532903)
G701N. (cervix)		SRR040024(GSM532909)
G613N. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR040012(GSM532897)
G648N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		SRR040008(GSM532893)
G727N. (cervix)		TAX577738(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040030(GSM532915)
G013N. (cervix)		SRR040019(GSM532904)
G701T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		GSM532929(GSM532929)
G702N. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR040032(GSM532917)
G603N. (cervix)		TAX577744(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040027(GSM532912)
G220T. (cervix)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
.........................................................................................................................................CTTTAGTACTTTTGGTACGCG............................................................................................2128.000.008.003.005.003.00--2.001.001.00-2.00---1.001.00----1.00-----
.........................................................................................................................................CTTTAGTACTTTTGGTACGC.............................................................................................209.000.002.002.001.001.001.001.00---1.00----------------
.........................................................................................................................................CTTTAGTACTTTTGGTTCGC.............................................................................................204.000.00-2.00-1.001.00---------------------
.........................................................................................................................................CTTTAGTACTTTTGGTACGCC............................................................................................213.000.00---1.00---1.00--------1.00---------
.........................................................................................................................................CTTTAGTACTTTTGGTAAGCG............................................................................................212.000.001.00----1.00--------------------
.........................................................................................................................................CTTTAGTACTTTTGGTACTCG............................................................................................212.000.001.00----------------------1.00--
.........................................................................................................................................CTTTAGTACTTTTGGTACTC.............................................................................................202.000.00---1.001.00---------------------
.........................................................................................................................................CTTTAGTACTTTTGGTACGCT............................................................................................212.000.00-1.00--1.00---------------------
...................................................TCAGTACTGCCTTGAGTCTAGGTTTCCAG..........................................................................................................................................................................291.000.00-----------------1.00--------
...............................................................................................................GTTATTATTAGTTGGAAA.........................................................................................................................1811.001.00---------1.00----------------
.........................................................................................................................................CTTTAGTACTTTTGGTACGG.............................................................................................201.000.00-------1.00------------------
.............AGGCTTAGGAAATTCCACTGC........................................................................................................................................................................................................................2111.001.00-----------1.00--------------
...................................................TCAGTACTGCCTTGAGTCTAGGTTTCAG...........................................................................................................................................................................281.000.00------------------------1.00-
.........................................................................................................................................CTTTAGTACTTTTGGTGCGC.............................................................................................201.000.001.00-------------------------
.........................................................................................................................................CTTTAGTACTTTTGGTTCG..............................................................................................191.000.00----1.00---------------------
..........................................................................................................................................TTTAGTACTTTTGGTATCCG............................................................................................201.000.00-----1.00--------------------
.........................................................................................................................................CTTTAGTACTTTTGGTACG..............................................................................................191.000.00-------------1.00------------
.........................................................................................................................................CTTTAGTACTTTTGGTACGCA............................................................................................211.000.00--1.00-----------------------
..................................................................................................................................................TTTTGGTAGTTCATAGTAC.....................................................................................191.000.00------------1.00-------------
.........................................................................................................................................CTTTAGTACTTTTGGTACGAC............................................................................................211.000.00------1.00-------------------
.........................................................................................................................................CTTTAGTACTTTTGGTACGGC............................................................................................211.000.00--------1.00-----------------
..................................................GTCAGTACTGCCTTG.........................................................................................................................................................................................1560.170.17-------------------------0.17

Antisense strand
ACTATGGAAAACTAGGCTTAGGAAATTCCACTGCAAAATCTTCACCTCAGGTCAGTACTGCCTTGAGTCTAGGTTTTCAGACAACATAAATAGTTTTCATCTATGTCAGTAGTTATTATTAGTTGGAAATAATTTACCTTTAGTACTTTTGGTAGTTCATAATGAAGTTTAGAAGCTTCTGTTGTGCATTCTTGAATGCCCACATGCTAGGTCTTGATTTTAAATAAGCTATTAATCCAGCTAAACTGGA
..........................................................................................................(((.((.(((((..((.((((.....)))).)).))))))).)))...................................................................................................
..........................................................................................................107....................................................162......................................................................................
SizePerfect hitTotal NormPerfect NormSRR040018(GSM532903)
G701N. (cervix)		SRR040024(GSM532909)
G613N. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR040012(GSM532897)
G648N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR040022(GSM532907)
G575N. (cervix)		SRR040014(GSM532899)
G623N. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		SRR040008(GSM532893)
G727N. (cervix)		TAX577738(Rovira)
total RNA. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040030(GSM532915)
G013N. (cervix)		SRR040019(GSM532904)
G701T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		GSM532929(GSM532929)
G702N. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR040032(GSM532917)
G603N. (cervix)		TAX577744(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR040027(GSM532912)
G220T. (cervix)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
.......................................................................................................................................................................................................................GATTTTAAATAAGCTAGGCT............... 201.000.00---------------------1.00----
...............................................CAGGTCAGTACTGCCTTGAGT...................................................................................................................................................................................... 211.000.00-------------------1.00------
............................................................................................................GTAGTTATTATTAGTATGA........................................................................................................................... 191.000.00------------------1.00-------
.......................................................TACTGCCTTGAGTCTATC................................................................................................................................................................................. 181.000.00----------------------1.00---