ID: uc002agz.2_intron_29_0_chr15_62212847_r.3p
GENE: (55)
chr15:62212797-62213046-


(2)
AGO2.ip
(5)
BREAST
(4)
CELL-LINE
(3)
HEART
(1)
LIVER
(1)
OTHER
(7)
SKIN

Sense strand
TCCCCATGCTTGGACTATACCCTGAAAGAATGAATGCTGAACTCCATGAAATCAAAGTGAAGCATGGTATATTTTTGAAAATAAGACTTTTGCGAAGCATTACTATAAAGTGATCAGTTTAGGAGAACTGAACTCCAGCATTTTTATTTTATTATCAACTGGCTAATAATTTAAATTTGCTGTGTTATTTTTCTTCATAGGTAAAGAAGAACCCAGTTCAGGATAAAAGTTTGCTGCCAGGAGATGATTT
.....................................................................................................................(((((.....)))))...(((((..((((..((((((((....)).))))))..))))..)))))....................................................................
.....................................................................................................................118.....................................................................190..........................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343334SRR343335SRR343337SRR343336SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189785SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786SRR189787SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..........................................................................................................................GAGAACTGAACTCCATG...............................................................................................................17626.671.001.008.677.004.675.17--0.17----------------------
.........................................................................................................................GGAGAACTGAACTCCATAG..............................................................................................................195.000.005.00-----------------------------
..........................................................................................................................GAGAACTGAACTCCATAG..............................................................................................................1865.001.003.670.330.33----0.50---0.17------------------
............................AATGAATGCTGAACTCTG............................................................................................................................................................................................................184.000.00-----3.00--1.00---------------------
.........................................................................................................................GGAGAACTGAACTCCATG...............................................................................................................183.000.00-1.001.001.00--------------------------
...................................................................................................................AGTTTAGGAGAACTGAACTCCAGC...............................................................................................................2412.002.00---------2.00--------------------
.............................ATGAATGCTGAACTCTG............................................................................................................................................................................................................172.000.00-----1.00----1.00-------------------
............................................................................................................................................................................................................AGAAGAACCCAGTTCAGGATAAAAG.....................2511.001.00--------------------1.00---------
.......................................................................................................................................................................................................................GTTCAGGATAAAAGTTTGCTGCCAGGAG.......2811.001.00------1.00-----------------------
..............................................................................................................................................................................................................................ATAAAAGTTTGCTGCCAGGAG.......2111.001.00-------------------1.00----------
...........................................................................................................................................................................................................................AGGATAAAAGTTTGCTGCCAGGAGATGAT..2911.001.00-------------1.00----------------
..........................................................................................................................................................................................................................CAGGATAAAAGTTTGCTGCCAGGAGAT.....2711.001.00----------------1.00-------------
.....................................................................................................................................................................................................................CAGTTCAGGATAAAAGTTTGCTGCCAGGAG.......3011.001.00------1.00-----------------------
.........................................................................................................................................................................................................................TCAGGATAAAAGTTTGCTGCCAGGAG.......2611.001.00----------------------1.00-------
.........................................................................................................................GGAGAACTGAACTCCATAT..............................................................................................................191.000.00-------1.00----------------------
.........................................................................................................................................................................................................................TCAGGATAAAAGTTTGCTGCCAGGAGATG....2911.001.00-----------------------1.00------
............................................................................................................................................................................................................AGAAGAACCCAGTTCAGGA...........................1911.001.00------------------------1.00-----
.........................................................................................................................GGAGAACTGAACTCCAGCGG.............................................................................................................201.000.00------------------1.00-----------
.........................................................................................................................GGAGAACTGAACTCCATGG..............................................................................................................191.000.001.00-----------------------------
............................................................................................................................................TTTTTATTTTATTATCAACTTC........................................................................................221.000.00-------------------------1.00----
...........................................................................................................................................................................................................................AGGATAAAAGTTTGCTGCCAGGAG.......2411.001.00--------------1.00---------------
...........................................................................................................................................................................................................................AGGATAAAAGTTTGCTGCCAGGAGATGA...2811.001.00--------1.00---------------------
...............................................................................................................................................TTATTTTATTATCAACTTTA.......................................................................................201.000.00--------------------------1.00---
......................................................................................................................................................................TAATTTAAATTTGCTGCTAT................................................................201.000.00-------1.00----------------------
.....................................................................................................................................TCCAGCATTTTTATTTTATTA................................................................................................2111.001.00-----------1.00------------------
.........................................................................................................................................................................................................................TCAGGATAAAAGTTTGCTGCCAGGAGAT.....2811.001.00---------------------1.00--------
...........................................................................................................................................................................................................................AGGATAAAAGTTTGCTGCC............1911.001.00----------1.00-------------------
......................................................................................................................................................................................................................AGTTCAGGATAAAAGTTTGCTGCCAGGAGATGATT.3511.001.00------------1.00-----------------
...................................................................................................................................................................................................................................AGTTTGCTGCCAGGAGA......1711.001.00-----------------1.00------------
.....................................................................................................................................................................................................................CAGTTCAGGATAAAAGTTTGCTGCCAGGAGA......3111.001.00------1.00-----------------------
..........................................................................................................................GAGAACTGAACTCCA.................................................................................................................1561.001.00-0.500.170.170.17-------------------------
..........................................................................................................................GAGAACTGAACTCCATAGG.............................................................................................................1960.671.00---------------------------0.500.17-
..........................................................................................................................GAGAACTGAACTCCATGA..............................................................................................................1860.171.00--0.17---------------------------
..........................................................................................................................GAGAACTGAACTCCACAG..............................................................................................................1860.171.000.17-----------------------------
..........................................................................................................................GAGAACTGAACTCCATGGG.............................................................................................................1960.171.00---------------------------0.17--
......................................................................................................................................................................................................................AGTTCAGGATAAAAGT....................1670.140.14-----------------------------0.14
.............................................................................................................................................................................................................GAAGAACCCAGTTCA..............................1580.120.12--------0.12---------------------

Antisense strand
TCCCCATGCTTGGACTATACCCTGAAAGAATGAATGCTGAACTCCATGAAATCAAAGTGAAGCATGGTATATTTTTGAAAATAAGACTTTTGCGAAGCATTACTATAAAGTGATCAGTTTAGGAGAACTGAACTCCAGCATTTTTATTTTATTATCAACTGGCTAATAATTTAAATTTGCTGTGTTATTTTTCTTCATAGGTAAAGAAGAACCCAGTTCAGGATAAAAGTTTGCTGCCAGGAGATGATTT
.....................................................................................................................(((((.....)))))...(((((..((((..((((((((....)).))))))..))))..)))))....................................................................
.....................................................................................................................118.....................................................................190..........................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343334SRR343335SRR343337SRR343336SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189785SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786SRR189787SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.......................................................................................................................................................................AATTTAAATTTGCTGCTTC................................................................ 191.000.00---------------1.00--------------
.......................CAGCATTCATTCTTTC................................................................................................................................................................................................................... 1620.500.50-----------0.50------------------