ID: uc002aga.2_intron_4_0_chr15_59453430_r.5p
GENE: (23)
chr15:59455156-59455405-


(1)
AGO2.ip
(12)
B-CELL
(1)
BRAIN
(47)
BREAST
(49)
CELL-LINE
(5)
CERVIX
(2)
FIBROBLAST
(8)
HEART
(2)
HELA
(1)
KIDNEY
(7)
LIVER
(4)
OTHER
(73)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
CGTTACGAGGAGAAGACCCAGAAGCAACTACCTCTGAAATTCAGCAATACGTAAGTCCGGATCTGGGACCCAGACTTCTGCGTGTAGCTAAAAAGGGGTCTTGATCGCACCCCTGCGATTCAGGATGGGGCTGGAGGAGGCCTGCGAGGAGAAGAGTGGGGTCTGGCTGGCCCCAGTGGAACCTTAGAGCCTGCAGAAGACAGTCTGGATAGTAGTCACAGACTTTGAAAAGGTTACTTTTGCATTTCTG
......................................................................................................................((((...(((((((((...((((((((..........))))).)))..))))))))).))))......................................................................
......................................................................................................................119.....................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577579(Rovira)
total RNA. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR029126(GSM416755)
143B. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR037931(GSM510469)
293GFP. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR029130(GSM416759)
DLD2. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040039(GSM532924)
G531T. (cervix)
SRR038861(GSM458544)
MM466. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR038856(GSM458539)
D11. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)
SRR191419(GSM715529)
41genomic small RNA (size selected RNA from t. (breast)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)
SRR191487(GSM715597)
126genomic small RNA (size selected RNA from . (breast)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR191545(GSM715655)
139genomic small RNA (size selected RNA from . (breast)
SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR189785SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR191525(GSM715635)
121genomic small RNA (size selected RNA from . (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191609(GSM715719)
194genomic small RNA (size selected RNA from . (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191526(GSM715636)
127genomic small RNA (size selected RNA from . (breast)
SRR191504(GSM715614)
124genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
........................................................................................................................................................................GGCCCCAGTGGAACCACCA...............................................................196532.001.1742.5042.6726.1716.0017.1715.3315.1712.3310.8310.179.339.339.17-8.838.17-7.837.677.677.177.506.337.337.175.676.505.506.506.176.176.005.505.675.505.334.833.674.674.504.003.674.001.833.673.671.673.673.333.333.003.173.003.003.00-2.832.672.672.672.671.502.332.500.332.172.17--2.001.832.002.00-1.670.831.831.831.831.671.671.331.501.501.501.171.001.330.331.170.170.330.171.170.17--------1.00----0.830.830.830.830.670.670.670.500.670.500.500.670.500.500.500.500.330.500.500.500.500.500.500.500.170.500.500.500.500.330.330.500.500.500.330.33-0.330.330.330.330.170.330.33-0.330.330.330.330.330.330.330.330.170.330.330.330.330.170.170.170.170.170.170.170.170.17-0.17---0.170.170.170.170.170.170.170.170.170.170.170.170.170.170.170.17-0.170.170.17-0.170.170.170.170.170.170.170.17-0.170.17-0.170.170.17-0.17
........................................................................................................................................................................GGCCCCAGTGGAACCACC................................................................1868.171.170.17--0.500.33----0.17--0.17----0.170.17-0.33-0.83--0.170.17-----0.33--------0.33---0.17-----------0.170.17---0.17-------0.17----------0.17---------0.83---------------------0.17---0.17------0.17-------0.33----0.17-----------0.17--0.33-------------------------0.170.17----------------0.17---0.17--------0.17--0.17-----
...................AGAAGCAACTACCTCTGAAATTC................................................................................................................................................................................................................2314.004.00-------------3.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................AGAAGCAACTACCTCTGAAATT.................................................................................................................................................................................................................2213.003.00-------------2.00-------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
..................................................................................................................................................AGGAGAAGAGTGGGGTCTGGCT..................................................................................2213.003.00-------------3.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................ACCTCTGAAATTCAGCAATACGCT.....................................................................................................................................................................................................243.000.00-------------------------------------------------------3.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................CTGGCCCCAGTGGAACCACCA...............................................................213.000.00----------1.00--------------1.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................TGGCCCCAGTGGAACCACCA...............................................................202.000.001.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................ACCTCTGAAATTCAGTTCA..........................................................................................................................................................................................................192.000.00-------------------------------------------2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................GATGGGGCTGGAGGAGGC.............................................................................................................1842.002.00--------------------------------------------------------------------2.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................AAGCAACTACCTCTGAAATTCAGCAATAC........................................................................................................................................................................................................2912.002.00----------------------------------------------------------------2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
........................CAACTACCTCTGAAATTCAG..............................................................................................................................................................................................................2012.002.00----------------------------------------------2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................AAAGGTTACTTTTGCACT....182.000.00-------------------------------------------------------------------------2.00------------------------------------------------------------------------------------------------------------------------------------------------
....................GAAGCAACTACCTCTGAAATTCAGCAATACGC......................................................................................................................................................................................................322.000.00-------------------------------------------------------------------1.00---------------------------------1.00--------------------------------------------------------------------------------------------------------------------
...................AGAAGCAACTACCTCTGAAATTCAGCA............................................................................................................................................................................................................2712.002.00----------------1.00-----------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACC...................................................................1561.171.17-----------------------------0.17-------0.17--------------------------------------------------------------------------0.17-------------------------------0.33---------------------0.17--------0.17------------------------------------------
.....................AAGCAACTACCTCTGAAATTCA...............................................................................................................................................................................................................2211.001.00-----------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................CCAGACTTCTGCGTGTGC...................................................................................................................................................................181.000.00-------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
......................AGCAACTACCTCTGAAATTCAGCA............................................................................................................................................................................................................2411.001.00---------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
......................AGCAACTACCTCTGAAATTCAG..............................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.......AGGAGAAGACCCAGAAGCAACTACC..........................................................................................................................................................................................................................2511.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................TGGGGCTGGAGGAGGCAGAG.........................................................................................................201.000.00-------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
...................AGAAGCAACTACCTCTGAAATTCA...............................................................................................................................................................................................................2411.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................AAGACAGTCTGGATAGTAGTCA................................2211.001.00--------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..................CAGAAGCAACTACCTCTGAAA...................................................................................................................................................................................................................2111.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................ACTACCTCTGAAATTCAGCAATACGCTT....................................................................................................................................................................................................281.000.00---------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
............AAGACCCAGAAGCAACTACCTCTG......................................................................................................................................................................................................................2411.001.00------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................AAGGTTACTTTTGCACT....171.000.00----------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................GCAGAAGACAGTCTGGATAG......................................2011.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......AGGAGAAGACCCAGAAGCAACTATA..........................................................................................................................................................................................................................251.000.00----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................TGGCCCCAGTGGAACCATCA...............................................................201.000.00------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
..TTACGAGGAGAAGACCCAGAAGCA................................................................................................................................................................................................................................2411.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................GCGAGGAGAAGAGTGGGGTCT......................................................................................2111.001.00------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GCCCCAGTGGAACCTACA...............................................................181.000.00-------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.........GAGAAGACCCAGAAGCAACTATA..........................................................................................................................................................................................................................231.000.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................CCTCTGAAATTCAGCAATACGC......................................................................................................................................................................................................221.000.00--------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
...................AGAAGCAACTACCTCTGAAA...................................................................................................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
............................................................................................................ACCCCTGCGATTCAGACCG...........................................................................................................................191.000.00----------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACCACCC...............................................................1961.001.17-0.17---0.17--------------------------------------0.17-----0.17------------------------------------------------------------------------------------------------------------------------------0.17--------------------------------------0.17-
........................................................................................................................................................................GGCCCCAGTGGAACCGCCA...............................................................1960.831.170.170.33------------------------------------------------------------------------0.17---------------------------------------------------------------0.17-------------------------------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACCACCG...............................................................1960.671.17-0.170.17-----------------------------------------------0.17--------------------------------------------------------------------------------------------------------------0.17--------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACCAACA...............................................................1960.501.17--------0.17-------------0.17--------------------------------------------------------------0.17------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACCACTA...............................................................1960.331.17---0.17---------------------------------------------------------------------------------------------------------------0.17------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACCCCCC...............................................................1960.331.17--------------------------------------------------------------------------------------0.33-----------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACCCCCA...............................................................1960.171.17---------------------------------------------------------------------------------0.17----------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACCAGCA...............................................................1960.171.17-------------------------0.17------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACCACT................................................................1860.171.17----------------------------------------------------------------------------------------------------------------------0.17---------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACCACAA...............................................................1960.171.17------------------------------------------------0.17-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACCATCA...............................................................1960.171.17------0.17-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................GGCCCCAGTGGAACCACCT...............................................................1960.171.17----0.17---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................TGGCCCCAGTGGAAC....................................................................1580.120.12---------0.12----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
CGTTACGAGGAGAAGACCCAGAAGCAACTACCTCTGAAATTCAGCAATACGTAAGTCCGGATCTGGGACCCAGACTTCTGCGTGTAGCTAAAAAGGGGTCTTGATCGCACCCCTGCGATTCAGGATGGGGCTGGAGGAGGCCTGCGAGGAGAAGAGTGGGGTCTGGCTGGCCCCAGTGGAACCTTAGAGCCTGCAGAAGACAGTCTGGATAGTAGTCACAGACTTTGAAAAGGTTACTTTTGCATTTCTG
......................................................................................................................((((...(((((((((...((((((((..........))))).)))..))))))))).))))......................................................................
......................................................................................................................119.....................................................................191.........................................................
SizePerfect hitTotal NormPerfect NormSRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR029129(GSM416758)
SW480. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
TAX577579(Rovira)
total RNA. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR029126(GSM416755)
143B. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189782SRR037931(GSM510469)
293GFP. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR029130(GSM416759)
DLD2. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR029125(GSM416754)
U2OS. (cell line)
SRR191451(GSM715561)
177genomic small RNA (size selected RNA from . (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444068(SRX128916)
Sample 25cDNABarcode: AF-PP-341: ACG CTC TTC . (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040039(GSM532924)
G531T. (cervix)
SRR038861(GSM458544)
MM466. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR038856(GSM458539)
D11. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)
SRR191419(GSM715529)
41genomic small RNA (size selected RNA from t. (breast)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)
SRR191487(GSM715597)
126genomic small RNA (size selected RNA from . (breast)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR191545(GSM715655)
139genomic small RNA (size selected RNA from . (breast)
SRR191556(GSM715666)
45genomic small RNA (size selected RNA from t. (breast)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR189785SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR191525(GSM715635)
121genomic small RNA (size selected RNA from . (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR191609(GSM715719)
194genomic small RNA (size selected RNA from . (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191526(GSM715636)
127genomic small RNA (size selected RNA from . (breast)
SRR191504(GSM715614)
124genomic small RNA (size selected RNA from . (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
...........GAAGACCCAGAAGCAAGC............................................................................................................................................................................................................................. 181.000.00-------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................GTGGGGTCTGGCTGGCCG............................................................................. 181.000.00--------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................GCTGGCCCCAGTGGAAGGC.................................................................. 191.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------