ID: uc002ads.2_intron_5_0_chr15_56885051_r.3p
GENE: (4)
chr15:56885001-56885250-


(9)
BREAST 		(10)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(1)
OTHER 		(1)
SKIN

Sense strand
TCTATCTCTTAAAAAGTTTCTGTAGTTATTATTTTTGATAGATTTCTCTTTATGTTTTCCTACTGAAGATAAGTGGTTTACACACTGCAATCACAGTGTCAGGGTATTCCGTATTTGTCTGTGTATTAACTATTACCAGTGCCTTTTAACCTTCAGGTGATTTCTTGTTGCTCATTAACATCCTTTTTTTTCTTTTTCAGATTGAAGAACTCCTTTTATCGTGTCTTGTAAAACAGGTCTGGTGTTGACA
......................................................................................((((.((.((.(((.(((((............(((.(((........)))))))))))....(((....))))))..))))))))...............................................................................
....................................................................................85.................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		TAX577739(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		TAX577453(Rovira)
total RNA. (breast)
..................................................................................................................................................................................CATCCTTTTTTTTCTTTAAG....................................................2012.000.001.008.001.00---2.00-----------------
.........................................................................................ATCACAGTGTCAGGGATTT..............................................................................................................................................197.000.00----3.00--1.00-1.00-----1.00------1.00-
..................................................................................................................................................................................CATCCTTTTTTTTCTTAAAG....................................................205.000.003.001.001.00---------------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTTTTTTG..................................................224.000.001.001.002.00---------------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTTTTG....................................................204.000.001.00-2.00---1.00-----------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTTTAAAG..................................................224.000.003.001.00----------------------
.................................................................................................................................................................................ACATCCTTTTTTTTCTTTTTTTTG.................................................243.000.002.001.00----------------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTTTCTG.................................................223.000.002.001.00----------------------
.........................................................................................ATCACAGTGTCAGGGTTTG..............................................................................................................................................192.000.00----1.00---1.00---------------
......................................................................................................................................................................................................AGATTGAAGAACTCCG....................................162.000.00--------------1.00----1.00----
.....................................................................................................................................................................................................CAGATTGAAGAACTCCG....................................172.000.00-----------2.00------------
..................................................................................................................................................................................CATCCTTTTTTTTCTAAAG.....................................................192.000.00--2.00---------------------
.........................................................................................ATCACAGTGTCAGGGTTTT..............................................................................................................................................192.000.00--------1.00---1.00-----------
.........................................................................................ATCACAGTGTCAGGGATT...............................................................................................................................................182.000.00----1.00---1.00---------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTTCG...................................................202.000.001.00-1.00---------------------
.............................................................................................................................................................................ATTAACATCCTTTTTCATG..........................................................192.000.00-----2.00------------------
.........................................................................................ATCACAGTGTCAGGGTTTTT.............................................................................................................................................201.000.00------------1.00-----------
.........................................................................................ATCACAGTGTCAGGGATCT..............................................................................................................................................191.000.00-----------------------1.00
..................................................................................................................................................................................CATCCTTTTTTTTCTTTAAT....................................................201.000.00-1.00----------------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTTAACG...................................................211.000.00-1.00----------------------
.........................................................................................ATCACAGTGTCAGGGTTTGC.............................................................................................................................................201.000.00--------------------1.00---
.........................................................................................ATCACAGTGTCAGGGTTTTC.............................................................................................................................................201.000.00-------1.00----------------
.....................................................................................................................................................................................CCTTTTTTTTCTTTTTCCCCG................................................211.000.00---1.00--------------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTTCTAAG................................................231.000.001.00-----------------------
.........................................................................................ATCACAGTGTCAGGGATC...............................................................................................................................................181.000.00------------------1.00-----
.................................................................................................................................................................................ACATCCTTTTTTTTCTTTTTTTTT.................................................241.000.001.00-----------------------
...........................................................................................................................................................................................TTTTCTTTTTCAGATTGTGG...........................................201.000.00---1.00--------------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTGT......................................................181.000.00----------1.00-------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTTTTTAG..................................................221.000.00--1.00---------------------
.........................................................................................ATCACAGTGTCAGGGTGGTA.............................................................................................................................................201.000.00---------1.00--------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTCCAG..................................................211.000.00--1.00---------------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTCTAG..................................................211.000.001.00-----------------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTTTAAG...................................................211.000.001.00-----------------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTTCAAA.................................................221.000.00--1.00---------------------
.........................................................................................ATCACAGTGTCAGGGTTTAC.............................................................................................................................................201.000.00-------------1.00----------
...................................................................................................................................................................................ATCCTTTTTTTTCTTAGCC....................................................191.000.00---1.00--------------------
.........................................................................................ATCACAGTGTCAGGGATGT..............................................................................................................................................191.000.00----1.00-------------------
..............................................................................................................................................CTTTTAACCTTCAGGTTTG.........................................................................................191.000.00-----1.00------------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTTAAAG...................................................211.000.001.00-----------------------
........................................................................................AATCACAGTGTCAGGGATTT..............................................................................................................................................201.000.00-------1.00----------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTTTTGTTG.................................................231.000.00-1.00----------------------
.....................................................................................................................................................................................CCTTTTTTTTCTTTTTCATCT................................................211.000.00--1.00---------------------
.........................................................................................ATCACAGTGTCAGGGATTA..............................................................................................................................................191.000.00---------------------1.00--
.........................................................................................ATCACAGTGTCAGGGTTTGA.............................................................................................................................................201.000.00---------1.00--------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTTTAT..................................................211.000.00----------1.00-------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTTATG....................................................201.000.00------1.00-----------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTGGG...................................................201.000.00---1.00--------------------
....................................................................................................................................................................................TCCTTTTTTTTCTTTTTCCTTG................................................221.000.00---1.00--------------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTTCATACG...............................................241.000.00--1.00---------------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTTTAAG.................................................221.000.001.00-----------------------
....................................................................................................................................................................................TCCTTTTTTTTCTTTTTCCTGG................................................221.000.00----------------1.00-------
.........................................................................................ATCACAGTGTCAGGGATGG..............................................................................................................................................191.000.00--------1.00---------------
...............................................................................................................................................................................TAACATCCTTTTTTTTTG.........................................................181.000.00--1.00---------------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTTTTCG...................................................211.000.00-1.00----------------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTAGCC..................................................211.000.00---1.00--------------------
.........................................................................................ATCACAGTGTCAGGGTATTCCC...........................................................................................................................................221.000.00-------1.00----------------
................................................................................................................................................................................AACATCCTTTTTTTTCTTTTTG....................................................221.000.00----------1.00-------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTTGC...................................................201.000.00---1.00--------------------
...............................................................................................................................................................................TAACATCCTTTTTTTTTGT........................................................191.000.00-----1.00------------------
..................................................................................................................................................................................CATCCTTTTTTTTCTTTGAA....................................................201.000.00---1.00--------------------
...................................................................................................................................................................................ATCCTTTTTTTTCTTTTTTCCG.................................................221.000.001.00-----------------------
.....................................................................................................................................................................................CCTTTTTTTTCTTTTTCAG..................................................1940.250.25--0.25---------------------
..........................................................................................................................................................................CTCATTAACATCCTTTTTTTT...........................................................2160.170.17--0.17---------------------
..........................................................................................................................................................................CTCATTAACATCCTTTTTTTTTAG........................................................2460.170.170.17-----------------------

Antisense strand
TCTATCTCTTAAAAAGTTTCTGTAGTTATTATTTTTGATAGATTTCTCTTTATGTTTTCCTACTGAAGATAAGTGGTTTACACACTGCAATCACAGTGTCAGGGTATTCCGTATTTGTCTGTGTATTAACTATTACCAGTGCCTTTTAACCTTCAGGTGATTTCTTGTTGCTCATTAACATCCTTTTTTTTCTTTTTCAGATTGAAGAACTCCTTTTATCGTGTCTTGTAAAACAGGTCTGGTGTTGACA
......................................................................................((((.((.((.(((.(((((............(((.(((........)))))))))))....(((....))))))..))))))))...............................................................................
....................................................................................85.................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		TAX577739(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR040010(GSM532895)
G529N. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577744(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		TAX577453(Rovira)
total RNA. (breast)
................................................................................................ACGGAATACCCTGACA.......................................................................................................................................... 1611.001.00-----------------1.00------
.....................................................................................................................................................................................................CAGATTGAAGAACTCGCT................................... 181.000.00-----1.00------------------