ID: uc002ado.1_intron_2_0_chr15_56665703_f.5p
GENE: (3)
chr15:56665653-56665902+


(1)
B-CELL
(6)
BREAST
(9)
CELL-LINE
(9)
LIVER
(3)
OTHER
(3)
SKIN
(1)
TESTES
(3)
UTERUS

Sense strand
AATTGCAGGCAAAAACAGCTGACGTGGTTCAACAAGCTAAGGAAATAATAGTAAGTATATGTACAATTATTAATAATTCTATATAAATGCTAGTTTTTTATCTTTTTCATTTGATATATGACATATATACAAAACACTAGCCAAAGCATGTGTGTTCAGTTCAATGAATTATTACAAATTGAACATGAATATATATGCATAGGTATAGGAATGTATATATGTATATGTTTTTAGTAAGCACACATTTTCT
..................................................................(((((...((((..(((((.(((((.(((((.(((.....((((.......)))).....))).))))).........))))).)))))..)))).)))))...................................................................................
.............................................................62........................................................................................................168................................................................................
SizePerfect hitTotal NormPerfect NormSRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577580(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577588(Rovira)
total RNA. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577590(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189786SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR029130(GSM416759)
DLD2. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR343335SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
.................................................................................................................................................GCATGTGTGTTCAGTGGTA......................................................................................19142.000.0026.0020.0018.0017.0015.009.009.009.005.00-5.004.00----2.00-1.00-----------1.00--1.00-
.................................................................................................................................................GCATGTGTGTTCAGTGGT.......................................................................................1830.000.003.005.001.001.001.005.001.001.001.006.001.00-------1.00-------1.001.00----1.00--
.................................................................................................................................................GCATGTGTGTTCAGTGATA......................................................................................196.000.00-2.00--1.001.001.00--------------1.00-------------
..................................................................TTATTAATAATTCTAGGGT.....................................................................................................................................................................194.000.00--------------------2.00----1.00-----1.00---
.............AACAGCTGACGTGGTTCAACAAGCTAAGGA...............................................................................................................................................................................................................3013.003.00--------------3.00--------------------
.................................................................................................................................................GCATGTGTGTTCAGTGGAA......................................................................................192.000.001.00------1.00---------------------------
.........................................................................................................................................................................................................GGTATAGGAATGTATATATG.............................2012.002.00-------------------2.00---------------
.................................................................................................................................................GCATGTGTGTTCAGTGATC......................................................................................192.000.00--2.00--------------------------------
.................................................................................................................................................GCATGTGTGTTCAGTGGGA......................................................................................191.000.00------1.00----------------------------
.....................................................................................AATGCTAGTTTTTTACTT...................................................................................................................................................181.000.00-------------1.00---------------------
...............................................................................................TTTTATCTTTTTCATTTGG........................................................................................................................................191.000.00-------------1.00---------------------
...............................................................................................................................................................................AAATTGAACATGAATATATATGC....................................................2311.001.00-----------------------1.00-----------
..............................................................................................TTTTTATCTTTTTCATTTTTAA......................................................................................................................................221.000.00-------------1.00---------------------
................................................................................................................................................AGCATGTGTGTTCAGGAA........................................................................................181.000.00------------------------1.00----------
..........................................................................................TAGTTTTTTATCTTTTATT.............................................................................................................................................191.000.00-------------1.00---------------------
...............................................................................................................................................................................................TATATGCATAGGTATAGGAATGTAT..................................2511.001.00----------------------------1.00------
.....................................................................................................................................................................................................................TATATATGTATATGTTCTTG.................201.000.00-----------------1.00-----------------
............................................................................................GTTTTTTATCTTTTTCAT............................................................................................................................................1860.170.17----------------------------------0.17

Antisense strand
AATTGCAGGCAAAAACAGCTGACGTGGTTCAACAAGCTAAGGAAATAATAGTAAGTATATGTACAATTATTAATAATTCTATATAAATGCTAGTTTTTTATCTTTTTCATTTGATATATGACATATATACAAAACACTAGCCAAAGCATGTGTGTTCAGTTCAATGAATTATTACAAATTGAACATGAATATATATGCATAGGTATAGGAATGTATATATGTATATGTTTTTAGTAAGCACACATTTTCT
..................................................................(((((...((((..(((((.(((((.(((((.(((.....((((.......)))).....))).))))).........))))).)))))..)))).)))))...................................................................................
.............................................................62........................................................................................................168................................................................................
SizePerfect hitTotal NormPerfect NormSRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577580(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577588(Rovira)
total RNA. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577590(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189786SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR189782SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR029130(GSM416759)
DLD2. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR343335SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
..............ACAGCTGACGTGGTTAGT.......................................................................................................................................................................................................................... 184.000.00------------4.00----------------------
.....................................................................................................................................................................................................................TATATATGTATATGTTTTTTAT............... 223.000.00---------------3.00-------------------
................................................................................................................................................................................................................GAATGTATATATGTATATATTA.................... 221.000.00-----------------------------1.00-----
...............................................................................................TTTTATCTTTTTCATTCTAA....................................................................................................................................... 201.000.00----------------------1.00------------
................................................................................................................................................................................................................GAATGTATATATGTATATTA...................... 201.000.00-----------------1.00-----------------