uc002abi.2_intron_0_0_chr15_52015847

CAGATTAAGTTATCAACACAGGCAGCCAAGAAGCTAAAAGAAGAGAGCAGGTAAGAATACCCTGGTACAAATGTCAAAGTCTAAATAAATCACTATTAAGATGTCCTTGCTGGGCCAAATCTTTCTTTTCTCTTTTCTTTGCCTTTTCTTTTCTTTTCTTTCTTTCTGATTTTTTTTCTTTTTTTCTTAATTTCTTTCTTTCTTAATTTCTTCCTTTCTTAATTTCTTTCTTTCTTTCTTTTTTTGCTTT ...................................................................................................................116........................................................................................207.........................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	SRR342899(SRX096795) small RNA seq of Left atrial tissue. (heart)	SRR037936(GSM510474) 293cand1. (cell line)	SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin)	SRR189782	TAX577589(Rovira) total RNA. (breast)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)
........................................................................................................................CTTTCTTTTCTCTTTTCTTTCATG..........................................................................................................	24		7.00	0.00	-	1.00	1.00	-	3.00	-	2.00	-	-	-	-	-	-	-
........................................................................................................................................................................................TCTTAATTTCTTTCTTTTG...............................................	19		6.00	0.00	-	4.00	2.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................................TTCTTTCTTTCTTAATTTCTTCACTG.................................	26		3.00	0.00	-	3.00	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................................................................TCTTAATTTCTTTCTTTCTTTCTTTTTTTTTTG.	33		3.00	0.00	-	1.00	1.00	-	1.00	-	-	-	-	-	-	-	-	-
.................................................................................................................................................TTCTTTTCTTTTCTTTCTGGTT...................................................................................	22		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................................................................TTTCTTTCTTTCTTTTTTTGCG..	22		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................................................................................TTTCTTTCTTTCTTTTTTTGGGC.	23		2.00	0.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................................................................TAATTTCTTTCTTTCTTTCTTTTTTTTTCG.	30		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTTCCAG.................................................................................	26		2.00	0.00	-	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................TTTTTTTCTTTTTTTCTTAAACAG........................................................	24		2.00	0.00	-	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................................................................TAATTTCTTTCTTTCTTTCTTTTTTTTTTG.	30		2.00	0.00	-	-	-	-	1.00	-	1.00	-	-	-	-	-	-	-
..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTCTTCG................................................................................	28		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................................................................................TTTCTTTTTTTGCTTGGCG	19		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................TTTCTGATTTTTTTTCTTTTTTTTAA..............................................................	26		2.00	0.00	-	-	-	2.00	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................ATTTCTTTCTTTCTTTCTTTTTTTAAGC.	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTCAG............................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTAGC...................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTTGCC...........................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................................TTAATTTCTTTCTTTCTTAAAAT.........................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................TTGCCTTTTCTTTTCTTTAACG..........................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................TCTGATTTTTTTTCTTTTTTTTGCC.............................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................................................................TTTCTTTCTTTCTTTCTTTTTTTGCTTGCG	30		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................TTTTCTTTTCTTTCTTTCTATG................................................................................	22		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTATG....................................................................................	23		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTTGGG...........................................................	23		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTCCAG...........................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................................................................................CTTTCTTTCTTTTTTTGCTAG	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................ATTTCTTTCTTTCTTTCTTAG........	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................CTTTTTTTCTTAATTTCTAGG....................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................TTTTTTTCTTTTTTTCTTAATTTAG.......................................................	25		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTCAAG..................................................................................	25		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................TCTCTTTTCTTTGCCTTTTCT.....................................................................................................	21	1	1.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCAGT.....................................................................................	23		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
............................................................................................................................................................................TTTTTCTTTTTTTCTTAACTC.........................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTAAG...................................................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................TGATTTTTTTTCTTTTTTTTGCC.............................................................	23		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.............................................................................................................................................CCTTTTCTTTTCTTTTCTTTCTTA.....................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................TCTTTCTTTTCTCTTTTGG................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
.........................................................................................................................................................................TTTTTTTTCTTTTTTTCGCAG............................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................TTCTTTTCTTTTCTTTCTTTCTGGC................................................................................	25		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................TCTTTCTTTTCTCTTTTGGGC..............................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................CTTTTCTTTTCTTTTCTTTATCG.....................................................................................	23		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................TTTTTTTCTTTTTTTCGGTC............................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................TTTTTTTTCTTTTTTTCGGTT............................................................	21		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
...........................AAGAAGCTAAAAGAAGAGAGCAGAGA.....................................................................................................................................................................................................	26		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-
....................................................................................................................................................................................................................................TCTTTCTTTCTTTTTTTGCTTGGCG	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................CTTTCTTTTCTCTTTTCTCTG.............................................................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................................TTTCTTTTTTTCTTAATTTTATG.....................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................................TCTTTCTTTCTTAATATAG.......................................	19		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................CTTTCTTTTCTCTTTTCTTAAG............................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................TTTTTTTTCTTTTTTTCGTC.............................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................AAAAGAAGAGAGCAGAGAT....................................................................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-
........................................................................................................................................................................ATTTTTTTTCTTTTTTTCGGT.............................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................................................................................TTTCTTTCTTTTTTTGCTGGCG	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................TTTTTTTTCTTTTTTTCTTAATTTG........................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................................................................TCTTTCTTTCTTTCTTTTTTTGCTTTTG	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................CTTTTCTTTTCTTTCTTTCTAGT................................................................................	23		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTGGCT...........................................................	23		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................................................................................TCTTTCTTTTTTTGCTTGGCG	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................TAAATAAATCACTATCTA.......................................................................................................................................................	18		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
........................................................................................................................................................................................................................TCTTAATTTCTTTCTTTCTTTCTTTTTTTTTG..	32		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
.............................................................................................................................................CCTTTTCTTTTCTTTTCTTTAG.......................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................................TGATTTTTTTTCTTTTTTTGGTA.............................................................	23		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTTAATTTAG.......................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................TTTTTTTTCTTTTTTTCTTAATGTG........................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................TTTTCTTTCTTTCTGATTTTG............................................................................	21		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
..............................................................................................................................................................................................................................TTTCTTTCTTTCTTTCTTTTTTTGCTGTGG	30		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTTCGGG.................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................CTGATTTTTTTTCTTTTTTTCTTTCGG..........................................................	27		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................CCTTTTCTTTTCTTTTCTTTCTTTCTTG.................................................................................	28		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTCCCCC................................................................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................TTTTTTTCTTTTTTTCGCAT............................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................................................................................TCTTTCTTTCTTTTTTTGGGC.	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................ATTTCTTTCTTTCTTTCTTTTTCG.....	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................................................................AATTTCTTTCTTTCTTTCTTTTTTTTTCG.	29		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTAACG.................................................................................	27		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
......................................................................................................................................................................TGATTTTTTTTCTTTTTTGGGT..............................................................	22		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................ATTTCTTTCTTTCTTTCTTTTTCTTG...	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................TTTTCTTTTCTTTTCTTTCGTAG....................................................................................	23		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTTGGTG..........................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................................................................TTTCTTTTCTTTTCTTTCTTTCTCTCG...............................................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTTCTCAG................................................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................................................CTTAATTTCTTCCTTTCTACTG...........................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTCCCC.................................................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTTCCCG.................................................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................TTCTTTCTGATTTTTTTTCTTTT....................................................................	23	1	1.00	1.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.............................................................................................................................................CCTTTTCTTTTCTTTTCTTTCTAAG....................................................................................	25		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................................................................................TTCTTTCTTTTTTTGCTGGC	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................................................................................TCTTTCTTTTTTTGCTTGGCA	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................TTTTCTTTTTTTCTTAACCCG........................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................CTTTTTTTCTTAATTTCTTG.....................................................	20		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................TTTTTTTCTTTTTTTCTTAACGGC........................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................................................................TAATTTCTTTCTTTCTTTCTTTTA.......	24		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
............................AGAAGCTAAAAGAAGAGAGCAGAG......................................................................................................................................................................................................	24		1.00	0.00	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-
...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTTCTGTCC...............................................................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................................................................................................................CTTTCTTTCTTTCTTTTTTTGCATG	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................................................................................TTCTTTTCTTTCTTTCTAAAG...............................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................CCTTTTCTTTTCTTTTCTGG.........................................................................................	20		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTGGGG...................................................................................	24		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................................................TCTTAATTTCTTCCTTTCTTAATTTCTTCCTT..................	32		1.00	0.00	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-
..........................................................................................................................................TTGCCTTTTCTTTTCTTTAAAG..........................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTCTTG..................................................................................	25		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTAATT.................................................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................TTGCCTTTTCTTTTCTTCTTG...........................................................................................	21		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................CCTTTTCTTTTCTTTTCTTTCATTT....................................................................................	25		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
..........................................................................................................................................................................TTTTTTTCTTTTTTTCTTACAT..........................................................	22		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................................................................TAATTTCTTTCTTTCTTTCTTTTTTTTTGC.	30		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................................................................................TAATTTCTTTCTTTCTTTCTTTTTTTTTG..	29		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................................................................................................TCTTTCTTTCTTTCTTTTTTTGCTGTGG	28		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................ATTTCTTTCTTTCTTTCTTTTTTTGC...	26	2	0.50	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTCTG..................................................................................	26	9	0.44	0.44	-	0.11	0.22	-	0.11	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................................................................TTAATTTCTTTCTTTCTTTCTTTTTTTG....	28	5	0.40	0.40	-	-	0.20	-	-	-	0.20	-	-	-	-	-	-	-
...........................................................................................................................................................................TTTTTTCTTTTTTTCTTAAT...........................................................	20	6	0.17	0.17	-	-	-	-	-	0.17	-	-	-	-	-	-	-	-
...........................................................................................................................................................................TTTTTTCTTTTTTTCTTAATCAAT.......................................................	24	6	0.17	0.17	-	-	-	-	0.17	-	-	-	-	-	-	-	-	-
...........................................................................................................................................TGCCTTTTCTTTTCTTTTCTTTCTT......................................................................................	25	6	0.17	0.17	-	-	-	0.17	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................................................................TTCTTTCTTTCTTTCTTTTTTTGC...	24	9	0.11	0.11	0.11	-	-	-	-	-	-	-	-	-	-	-	-	-

CAGATTAAGTTATCAACACAGGCAGCCAAGAAGCTAAAAGAAGAGAGCAGGTAAGAATACCCTGGTACAAATGTCAAAGTCTAAATAAATCACTATTAAGATGTCCTTGCTGGGCCAAATCTTTCTTTTCTCTTTTCTTTGCCTTTTCTTTTCTTTTCTTTCTTTCTGATTTTTTTTCTTTTTTTCTTAATTTCTTTCTTTCTTAATTTCTTCCTTTCTTAATTTCTTTCTTTCTTTCTTTTTTTGCTTT

...................................................................................................................116........................................................................................207.........................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)

SRR037936(GSM510474)
293cand1. (cell line)

SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)

SRR189782

TAX577589(Rovira)
total RNA. (breast)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

........................................................................................................................CTTTCTTTTCTCTTTTCTTTCATG..........................................................................................................

7.00

0.00

1.00

3.00

2.00

........................................................................................................................................................................................TCTTAATTTCTTTCTTTTG...............................................

6.00

0.00

4.00

2.00

...............................................................................................................................................................................................TTCTTTCTTTCTTAATTTCTTCACTG.................................

3.00

0.00

3.00

........................................................................................................................................................................................................................TCTTAATTTCTTTCTTTCTTTCTTTTTTTTTTG.

3.00

0.00

1.00

.................................................................................................................................................TTCTTTTCTTTTCTTTCTGGTT...................................................................................

2.00

0.00

2.00

..................................................................................................................................................................................................................................TTTCTTTCTTTCTTTTTTTGCG..

2.00

0.00

2.00

..................................................................................................................................................................................................................................TTTCTTTCTTTCTTTTTTTGGGC.

2.00

0.00

1.00

...........................................................................................................................................................................................................................TAATTTCTTTCTTTCTTTCTTTTTTTTTCG.

2.00

0.00

2.00

...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTTCCAG.................................................................................

2.00

0.00

1.00

..........................................................................................................................................................................TTTTTTTCTTTTTTTCTTAAACAG........................................................

2.00

0.00

1.00

...........................................................................................................................................................................................................................TAATTTCTTTCTTTCTTTCTTTTTTTTTTG.

2.00

0.00

1.00

..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTCTTCG................................................................................

2.00

0.00

2.00

..........................................................................................................................................................................................................................................TTTCTTTTTTTGCTTGGCG

2.00

0.00

2.00

..................................................................................................................................................................TTTCTGATTTTTTTTCTTTTTTTTAA..............................................................

2.00

0.00

2.00

.............................................................................................................................................................................................................................ATTTCTTTCTTTCTTTCTTTTTTTAAGC.

1.00

0.00

1.00

........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTCAG............................................................

1.00

0.00

1.00

...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTAGC...................................................................................

1.00

0.00

1.00

........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTTGCC...........................................................

1.00

0.00

1.00

..........................................................................................................................................................................................TTAATTTCTTTCTTTCTTAAAAT.........................................

1.00

0.00

1.00

..........................................................................................................................................TTGCCTTTTCTTTTCTTTAACG..........................................................................................

1.00

0.00

1.00

....................................................................................................................................................................TCTGATTTTTTTTCTTTTTTTTGCC.............................................................

1.00

0.00

1.00

..............................................................................................................................................................................................................................TTTCTTTCTTTCTTTCTTTTTTTGCTTGCG

1.00

0.00

1.00

....................................................................................................................................................TTTTCTTTTCTTTCTTTCTATG................................................................................

1.00

0.00

1.00

...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTATG....................................................................................

1.00

0.00

1.00

........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTTGGG...........................................................

1.00

0.00

1.00

........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTCCAG...........................................................

1.00

0.00

1.00

.....................................................................................................................................................................................................................................CTTTCTTTCTTTTTTTGCTAG

1.00

0.00

1.00

.............................................................................................................................................................................................................................ATTTCTTTCTTTCTTTCTTAG........

1.00

0.00

1.00

.................................................................................................................................................................................CTTTTTTTCTTAATTTCTAGG....................................................

1.00

0.00

1.00

..........................................................................................................................................................................TTTTTTTCTTTTTTTCTTAATTTAG.......................................................

1.00

0.00

1.00

...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTCAAG..................................................................................

1.00

0.00

1.00

................................................................................................................................TCTCTTTTCTTTGCCTTTTCT.....................................................................................................

1.00

..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCAGT.....................................................................................

1.00

0.00

1.00

............................................................................................................................................................................TTTTTCTTTTTTTCTTAACTC.........................................................

1.00

0.00

1.00

..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTAAG...................................................................................

1.00

0.00

1.00

......................................................................................................................................................................TGATTTTTTTTCTTTTTTTTGCC.............................................................

1.00

0.00

1.00

.............................................................................................................................................CCTTTTCTTTTCTTTTCTTTCTTA.....................................................................................

1.00

0.00

1.00

.......................................................................................................................TCTTTCTTTTCTCTTTTGG................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................................TTTTTTTTCTTTTTTTCGCAG............................................................

1.00

0.00

1.00

.................................................................................................................................................TTCTTTTCTTTTCTTTCTTTCTGGC................................................................................

1.00

0.00

1.00

.......................................................................................................................TCTTTCTTTTCTCTTTTGGGC..............................................................................................................

1.00

0.00

1.00

..............................................................................................................................................CTTTTCTTTTCTTTTCTTTATCG.....................................................................................

1.00

0.00

1.00

..........................................................................................................................................................................TTTTTTTCTTTTTTTCGGTC............................................................

1.00

0.00

1.00

.........................................................................................................................................................................TTTTTTTTCTTTTTTTCGGTT............................................................

1.00

0.00

1.00

...........................AAGAAGCTAAAAGAAGAGAGCAGAGA.....................................................................................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................TCTTTCTTTCTTTTTTTGCTTGGCG

1.00

0.00

1.00

........................................................................................................................CTTTCTTTTCTCTTTTCTCTG.............................................................................................................

1.00

0.00

1.00

..............................................................................................................................................................................TTTCTTTTTTTCTTAATTTTATG.....................................................

1.00

0.00

1.00

................................................................................................................................................................................................TCTTTCTTTCTTAATATAG.......................................

1.00

0.00

1.00

........................................................................................................................CTTTCTTTTCTCTTTTCTTAAG............................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................................TTTTTTTTCTTTTTTTCGTC.............................................................

1.00

0.00

1.00

...................................AAAAGAAGAGAGCAGAGAT....................................................................................................................................................................................................

1.00

0.00

1.00

........................................................................................................................................................................ATTTTTTTTCTTTTTTTCGGT.............................................................

1.00

0.00

1.00

......................................................................................................................................................................................................................................TTTCTTTCTTTTTTTGCTGGCG

1.00

0.00

1.00

.........................................................................................................................................................................TTTTTTTTCTTTTTTTCTTAATTTG........................................................

1.00

0.00

1.00

................................................................................................................................................................................................................................TCTTTCTTTCTTTCTTTTTTTGCTTTTG

1.00

0.00

1.00

...................................................................................................................................................CTTTTCTTTTCTTTCTTTCTAGT................................................................................

1.00

0.00

1.00

........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTGGCT...........................................................

1.00

0.00

1.00

........................................................................................................................................................................................................................................TCTTTCTTTTTTTGCTTGGCG

1.00

0.00

1.00

.................................................................................TAAATAAATCACTATCTA.......................................................................................................................................................

1.00

0.00

1.00

........................................................................................................................................................................................................................TCTTAATTTCTTTCTTTCTTTCTTTTTTTTTG..

1.00

0.00

1.00

.............................................................................................................................................CCTTTTCTTTTCTTTTCTTTAG.......................................................................................

1.00

0.00

1.00

......................................................................................................................................................................TGATTTTTTTTCTTTTTTTGGTA.............................................................

1.00

0.00

1.00

........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTTAATTTAG.......................................................

1.00

0.00

1.00

.........................................................................................................................................................................TTTTTTTTCTTTTTTTCTTAATGTG........................................................

1.00

0.00

1.00

.........................................................................................................................................................TTTTCTTTCTTTCTGATTTTG............................................................................

1.00

0.00

1.00

..............................................................................................................................................................................................................................TTTCTTTCTTTCTTTCTTTTTTTGCTGTGG

1.00

0.00

1.00

...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTTCGGG.................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................CTGATTTTTTTTCTTTTTTTCTTTCGG..........................................................

1.00

0.00

1.00

.............................................................................................................................................CCTTTTCTTTTCTTTTCTTTCTTTCTTG.................................................................................

1.00

0.00

1.00

..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTCCCCC................................................................................

1.00

0.00

1.00

..........................................................................................................................................................................TTTTTTTCTTTTTTTCGCAT............................................................

1.00

0.00

1.00

....................................................................................................................................................................................................................................TCTTTCTTTCTTTTTTTGGGC.

1.00

0.00

1.00

.............................................................................................................................................................................................................................ATTTCTTTCTTTCTTTCTTTTTCG.....

1.00

0.00

1.00

............................................................................................................................................................................................................................AATTTCTTTCTTTCTTTCTTTTTTTTTCG.

1.00

0.00

1.00

..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTAACG.................................................................................

1.00

0.00

1.00

......................................................................................................................................................................TGATTTTTTTTCTTTTTTGGGT..............................................................

1.00

0.00

1.00

.............................................................................................................................................................................................................................ATTTCTTTCTTTCTTTCTTTTTCTTG...

1.00

0.00

1.00

...............................................................................................................................................TTTTCTTTTCTTTTCTTTCGTAG....................................................................................

1.00

0.00

1.00

........................................................................................................................................................................ATTTTTTTTCTTTTTTTCTTGGTG..........................................................

1.00

0.00

1.00

................................................................................................................................................TTTCTTTTCTTTTCTTTCTTTCTCTCG...............................................................................

1.00

0.00

1.00

...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTTCTCAG................................................................................

1.00

0.00

1.00

.........................................................................................................................................................................................................CTTAATTTCTTCCTTTCTACTG...........................

1.00

0.00

1.00

..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTCCCC.................................................................................

1.00

0.00

1.00

...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTTCCCG.................................................................................

1.00

0.00

1.00

...............................................................................................................................................................TTCTTTCTGATTTTTTTTCTTTT....................................................................

1.00

.............................................................................................................................................CCTTTTCTTTTCTTTTCTTTCTAAG....................................................................................

1.00

0.00

1.00

.......................................................................................................................................................................................................................................TTCTTTCTTTTTTTGCTGGC

1.00

0.00

1.00

........................................................................................................................................................................................................................................TCTTTCTTTTTTTGCTTGGCA

1.00

0.00

1.00

.............................................................................................................................................................................TTTTCTTTTTTTCTTAACCCG........................................................

1.00

0.00

1.00

.................................................................................................................................................................................CTTTTTTTCTTAATTTCTTG.....................................................

1.00

0.00

1.00

..........................................................................................................................................................................TTTTTTTCTTTTTTTCTTAACGGC........................................................

1.00

0.00

1.00

...........................................................................................................................................................................................................................TAATTTCTTTCTTTCTTTCTTTTA.......

1.00

0.00

1.00

............................AGAAGCTAAAAGAAGAGAGCAGAG......................................................................................................................................................................................................

1.00

0.00

1.00

...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTTCTGTCC...............................................................................

1.00

0.00

1.00

.................................................................................................................................................................................................................................CTTTCTTTCTTTCTTTTTTTGCATG

1.00

0.00

1.00

......................................................................................................................................................TTCTTTTCTTTCTTTCTAAAG...............................................................................

1.00

0.00

1.00

.............................................................................................................................................CCTTTTCTTTTCTTTTCTGG.........................................................................................

1.00

0.00

1.00

...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTGGGG...................................................................................

1.00

0.00

1.00

........................................................................................................................................................................................................TCTTAATTTCTTCCTTTCTTAATTTCTTCCTT..................

1.00

0.00

1.00

..........................................................................................................................................TTGCCTTTTCTTTTCTTTAAAG..........................................................................................

1.00

0.00

1.00

...............................................................................................................................................TTTTCTTTTCTTTTCTTTCTTCTTG..................................................................................

1.00

0.00

1.00

..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTAATT.................................................................................

1.00

0.00

1.00

..........................................................................................................................................TTGCCTTTTCTTTTCTTCTTG...........................................................................................

1.00

0.00

1.00

.............................................................................................................................................CCTTTTCTTTTCTTTTCTTTCATTT....................................................................................

1.00

0.00

1.00

..........................................................................................................................................................................TTTTTTTCTTTTTTTCTTACAT..........................................................

1.00

0.00

1.00

...........................................................................................................................................................................................................................TAATTTCTTTCTTTCTTTCTTTTTTTTTGC.

1.00

0.00

1.00

...........................................................................................................................................................................................................................TAATTTCTTTCTTTCTTTCTTTTTTTTTG..

1.00

0.00

1.00

................................................................................................................................................................................................................................TCTTTCTTTCTTTCTTTTTTTGCTGTGG

1.00

0.00

1.00

.............................................................................................................................................................................................................................ATTTCTTTCTTTCTTTCTTTTTTTGC...

0.50

..............................................................................................................................................CTTTTCTTTTCTTTTCTTTCTTTCTG..................................................................................

0.44

0.11

0.22

0.11

..........................................................................................................................................................................................................................TTAATTTCTTTCTTTCTTTCTTTTTTTG....

0.40

0.20

...........................................................................................................................................................................TTTTTTCTTTTTTTCTTAAT...........................................................

0.17

...........................................................................................................................................................................TTTTTTCTTTTTTTCTTAATCAAT.......................................................

0.17

...........................................................................................................................................TGCCTTTTCTTTTCTTTTCTTTCTT......................................................................................

0.17

...............................................................................................................................................................................................................................TTCTTTCTTTCTTTCTTTTTTTGC...

0.11