| (8) BREAST | (8) CELL-LINE | (3) CERVIX | (1) OTHER | (3) SKIN |
| GATTGCTAGTTATTTTAGCTGTTGTCTACTGCCAAAGAAACCTTTTAATATCATTATTATTCGTCTGCGTTTTTATAAAAGGCCAGTACTCTGCACAGTTCGTTTCTTAGAGTTTCCATTTAAGAGAAGTAAATGAAGTATTAAAGTTGAATTTTTTGTGTCTATGAAAGTTGAAACTTTTTTTTTTTCCTATGCAATAGAGCAATGGTGAAAAGAATGAAAAATGTGAGACCAAAGAGAAAGGTAAGTG ....................................................................................((((((...((.......(((((((((.......)))))))))......)).))))))............................................................................................................ ..............................................................................79......................................................................151................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | TAX577740(Rovira) total RNA. (breast) | TAX577744(Rovira) total RNA. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189785 | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577743(Rovira) total RNA. (breast) | SRR343334 | SRR189784 | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | TAX577588(Rovira) total RNA. (breast) | TAX577746(Rovira) total RNA. (breast) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR037937(GSM510475) 293cand2. (cell line) | TAX577741(Rovira) total RNA. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040017(GSM532902) G645T. (cervix) | SRR343335 | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | TAX577745(Rovira) total RNA. (breast) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040008(GSM532893) G727N. (cervix) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM532874(GSM532874) G699T. (cervix) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | DRR000559(DRX000317) "THP-1 whole cell RNA, no treatment". (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................GTAAATGAAGTATTACATG....................................................................................................... | 19 | 56.00 | 0.00 | 56.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................GTAAATGAAGTATTACAT........................................................................................................ | 18 | 4.00 | 0.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................GTAAATGAAGTATTACACG....................................................................................................... | 19 | 3.00 | 0.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................GTAAATGAAGTATTACATT....................................................................................................... | 19 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................CAGTACTCTGCACAGTGGTT................................................................................................................................................... | 20 | 2.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................GTAAATGAAGTATTACCTG....................................................................................................... | 19 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................CCAGTACTCTGCACAGTGGT.................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ..................................................................................CCAGTACTCTGCACATTTG..................................................................................................................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................AAACTTTTTTTTTTTCCCATA........................................................ | 21 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................GTAAATGAAGTATTAAAGG....................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................TGAAAAATGTGAGACCAAAGA............ | 21 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................GTAAATGAAGTATTAAATG....................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................CCAGTACTCTGCACAGTGGTT................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................CCAGTACTCTGCACAGTGCTT................................................................................................................................................... | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................ACTTTTTTTTTTTCCTATATGT..................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................ACTTTTTTTTTTTCCCGAC........................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................................................TGAAAAATGTGAGACCAAAGAGAAAGAGTC... | 30 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................CCAGTACTCTGCACACAA...................................................................................................................................................... | 18 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................CTTTTTTTTTTTCCTATGCAAAA................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................ACTTTTTTTTTTTCCTATG........................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................AACTTTTTTTTTTTCCTGGAG....................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................CAGTACTCTGCACAGTCCCT................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................GTAAATGAAGTATTAGATG....................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................CAGTACTCTGCACAGTGGCT................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................GTAAATGAAGTATTACATA....................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................GTAAATGAAGTATTACAAG....................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................CCAGTACTCTGCACATTG...................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................CCAGTACTCTGCACAGTC...................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................CCAGTACTCTGCACAGTGG..................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................................................ACCAAAGAGAAAGGTATG.. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................GTAAATGAAGTATTAGACT....................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................GTAAATGAAGTATTATATT....................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................AACTTTTTTTTTTTCCCCG......................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ..................................................................................CCAGTACTCTGCACAGTCGTT................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................CCAGTACTCTGCACATTGG..................................................................................................................................................... | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................GTGAGACCAAAGAGAAAG....... | 18 | 3 | 0.67 | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.67 | - | - | - | - |
| ...........................................................................................................................................................................................................AATGGTGAAAAGAATGAAAAATGTGAGACC................. | 30 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ..........................................................................................................................................................................................................................GAAAAATGTGAGACCAAAGAGAAAG....... | 25 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - |
| ..............................................................................................................................................................................................................GGTGAAAAGAATGAAAAATG........................ | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ........................................................................................................................................................................................TTTTCCTATGCAATAG.................................................. | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| GATTGCTAGTTATTTTAGCTGTTGTCTACTGCCAAAGAAACCTTTTAATATCATTATTATTCGTCTGCGTTTTTATAAAAGGCCAGTACTCTGCACAGTTCGTTTCTTAGAGTTTCCATTTAAGAGAAGTAAATGAAGTATTAAAGTTGAATTTTTTGTGTCTATGAAAGTTGAAACTTTTTTTTTTTCCTATGCAATAGAGCAATGGTGAAAAGAATGAAAAATGTGAGACCAAAGAGAAAGGTAAGTG ....................................................................................((((((...((.......(((((((((.......)))))))))......)).))))))............................................................................................................ ..............................................................................79......................................................................151................................................................................................. | Size | Perfect hit | Total Norm | Perfect Norm | SRR189782 | TAX577740(Rovira) total RNA. (breast) | TAX577744(Rovira) total RNA. (breast) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189785 | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | TAX577743(Rovira) total RNA. (breast) | SRR343334 | SRR189784 | DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line) | TAX577588(Rovira) total RNA. (breast) | TAX577746(Rovira) total RNA. (breast) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR037937(GSM510475) 293cand2. (cell line) | TAX577741(Rovira) total RNA. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040017(GSM532902) G645T. (cervix) | SRR343335 | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330916(SRX091754) tissue: normal skindisease state: normal. (skin) | TAX577745(Rovira) total RNA. (breast) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040008(GSM532893) G727N. (cervix) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | GSM532874(GSM532874) G699T. (cervix) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | DRR000559(DRX000317) "THP-1 whole cell RNA, no treatment". (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................AGAGAAGTAAATGAAGTCAG............................................................................................................ | 20 | 2.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................ATTAAAGTTGAATTTTTTT............................................................................................ | 19 | 2.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................CTGCGTTTTTATAAAAGATT...................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................AAGTAAATGAAGTATTATTTC....................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................CCAAAGAAACCTTTTAATA........................................................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................TCTGCGTTTTTATAAAAGTA....................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................ATTAAAGTTGAATTTTTT............................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................AAGTTGAATTTTTTGCTG......................................................................................... | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |