ID: uc001zxd.1_intron_15_0_chr15_49329967_r.5p
GENE: (1)
chr15:49338273-49338522-


(4)
B-CELL 		(1)
BRAIN 		(11)
BREAST 		(9)
CELL-LINE 		(4)
CERVIX 		(3)
HEART 		(2)
LIVER 		(1)
OTHER 		(27)
SKIN 		(3)
UTERUS

Sense strand
GCGGGCCCGTTGCGGCTGCAGGCACCATGGACCGAGCCCCCACGGAGCAGGTACGCGGGTTTGGGCTGGGCCCGCCGAGCCGGGGGTTGGGGTCGCCGCTTCCTCACAGGCCAGGCCCAGTTCTCCGAACGTGGGGACCGGGGGCCGGTCCTGCGGCCGCAGACCCCCTCACCTGGGAGCCTGGCAGCTCCCAGCTCTCCTTCATTGTTCCAGCTGCTGCCTGGGACTTGGGGGCTTTTCCAACCCTGAT
................................................................((((((((.(((.....((..((.((.....))))..)).....)))..))))))))........((..((.(((((...)))))))..))...............................................................................................
................................................................65........................................................................................155.............................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532880(GSM532880)
G659T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040015(GSM532900)
G623T. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
.....................................................................................................................................GGGACCGGGGGCCGGTGC...................................................................................................18112.006.00-----2.00-2.00----1.00-1.00---2.00-1.00-----------1.00------1.00------------1.00--------------
......................................................................CCCGCCGAGCCGGGGA....................................................................................................................................................................1659.601.806.402.60-----------------------0.20-------------------------------------0.20-0.20-
.....................................................................GCCCGCCGAGCCGGGGA....................................................................................................................................................................177.000.001.002.00-----------------------1.00-----------1.00------------1.00-------1.00--------
.....................................................................................................................................GGGACCGGGGGCCGGTGCGG.................................................................................................2017.006.00-----1.00-1.00---1.00--1.00----------------1.00-------------1.00-----1.00---------------
.....................................................................................................................................GGGACCGGGGGCCGGT.....................................................................................................1616.006.00---3.00-------------------1.00-----------1.00------------------1.00------------
.....................................................................................................................................GGGACCGGGGGCCGGTGCG..................................................................................................1915.006.00---3.00-------1.00------------------------1.00------------------------------
......................................................................................................................................GGACCGGGGGCCGGTGCGG.................................................................................................1913.002.00------1.00---------------1.00---1.00----------------------------------------
..........TGCGGCTGCAGGCACCGGCA............................................................................................................................................................................................................................203.000.001.002.00-----------------------------------------------------------------
.............................................................................AGCCGGGGGTTGGGGGT............................................................................................................................................................172.000.00-------------------1.00--1.00--------------------------------------------
......................................................................................................................................GGACCGGGGGCCGGT.....................................................................................................1512.002.00--------1.00---------------------------------------1.00------------------
......................................................................................................................................GGACCGGGGGCCGGTGCG..................................................................................................1812.002.00-------------1.00----------1.00------------------------------------------
...............................................CAGGTACGCGGGTTTGGGCTGG.....................................................................................................................................................................................2212.002.00----------------2.00--------------------------------------------------
.....................................................................................................................................GGGACCGGGGGCCGGTG....................................................................................................1712.006.00--------------------1.00-------------------------1.00--------------------
..........TGCGGCTGCAGGCACCGGGG............................................................................................................................................................................................................................202.000.001.001.00-----------------------------------------------------------------
...........................................................TTTGGGCTGGGCCCGGGTG............................................................................................................................................................................192.000.00----2.00--------------------------------------------------------------
..................CAGGCACCATGGACCGAGCC....................................................................................................................................................................................................................2012.002.00---------------------2.00---------------------------------------------
......................................................................CCCGCCGAGCCGGGG.....................................................................................................................................................................1551.801.801.400.40-----------------------------------------------------------------
.....................................................................................................................................GGGACCGGGGGCCGG......................................................................................................1551.601.60---0.20--------0.200.20---------0.200.20-0.20-----------------------------------0.20-0.20--
......................................................................CCCGCCGAGCCGGGGG....................................................................................................................................................................1621.501.501.50------------------------------------------------------------------
..................................................GTACGCGGGTTTGGGCGA......................................................................................................................................................................................181.000.00----------1.00--------------------------------------------------------
.......................................................CGGGTTTGGGCTGGGGGT.................................................................................................................................................................................181.000.00----1.00--------------------------------------------------------------
.......................................................................CCGCCGAGCCGGGGGT...................................................................................................................................................................1611.001.00------1.00------------------------------------------------------------
............CGGCTGCAGGCACCATGGACCGAGCCCCCACGG.............................................................................................................................................................................................................3311.001.00---------------1.00---------------------------------------------------
.......................................................................................TGGGGTCGCCGCTTCCACGG...............................................................................................................................................201.000.00------------------------------1.00------------------------------------
.....................................................................GCCCGCCGAGCCGGGGAT...................................................................................................................................................................181.000.001.00------------------------------------------------------------------
..........................................................................................................................CTCCGAACGTGGGGACCGGGGGCC........................................................................................................2411.001.00--------------------------------------1.00----------------------------
...........GCGGCTGCAGGCACCAGCG............................................................................................................................................................................................................................191.000.00-1.00-----------------------------------------------------------------
..........................................................................................................................................................................ACCTGGGAGCCTGGCAGCAAC...........................................................211.000.00-----------------1.00-------------------------------------------------
......................................................................................................................................GGACCGGGGGCCGGTG....................................................................................................1611.002.00---------------------------1.00---------------------------------------
......................................................................................................................................GGACCGGGGGCCGGTGC...................................................................................................1711.002.00------------1.00------------------------------------------------------
......................................................GCGGGTTTGGGCTGGGCAT.................................................................................................................................................................................191.000.00-----------------------------1.00-------------------------------------
.........................CATGGACCGAGCCCCCACGGAGCAGAA......................................................................................................................................................................................................271.000.00-------------------------------------------1.00-----------------------
..................................................GTACGCGGGTTTGGGCTGGGCC..................................................................................................................................................................................2211.001.00----------------------------1.00--------------------------------------
....GCCCGTTGCGGCTGCAGGCACCA...............................................................................................................................................................................................................................2311.001.00------------------------------------------1.00------------------------
......................................................................................................................................GGACCGGGGGCCGGTGGG..................................................................................................1811.002.00------------------------------------------------------------1.00------
........................................................................................................................................ACCGGGGGCCGGTCCCCC................................................................................................181.000.00-----------------------------------------1.00-------------------------
..............................................................................................................................................................................................CCAGCTCTCCTTCATTGTTCCAGC....................................2411.001.00--------1.00----------------------------------------------------------
......CCGTTGCGGCTGCAGGCACC................................................................................................................................................................................................................................2011.001.00---------------1.00---------------------------------------------------
....................................................................................................................................GGGGACCGGGGGCCGGTCCTGCGGCCGCCGG.......................................................................................311.000.00----1.00--------------------------------------------------------------
....................................................................................................................................GGGGACCGGGGGCCGGTGC...................................................................................................191.000.00----------------------------------1.00--------------------------------
............CGGCTGCAGGCACCATGGACCGAGCC....................................................................................................................................................................................................................2611.001.00--------------------------------------------------------1.00----------
......................CACCATGGACCGAGCCCC..................................................................................................................................................................................................................1811.001.00-------------------------------------------------------1.00-----------
..........................................................................................................................................................................ACCTGGGAGCCTGGCAGCT.............................................................1911.001.00----------------------------------------1.00--------------------------
......................................................GCGGGTTTGGGCTGGAGGT.................................................................................................................................................................................191.000.00-------------------------------------------------------------1.00-----
......................................................................................................................................GGACCGGGGGCCGGTGCGT.................................................................................................1911.002.00--------------------------------------------1.00----------------------
..................................................GTACGCGGGTTTGGGCTGG.....................................................................................................................................................................................1911.001.00---------------------------------------------------------1.00---------
.....................................................................................................................................GGGACCGGGGGCCGGAA....................................................................................................1751.001.60-------------------1.00-----------------------------------------------
.................................................GGTACGCGGGTTTGGACGT......................................................................................................................................................................................191.000.00----------1.00--------------------------------------------------------
...........................................................................................................................TCCGAACGTGGGGACCGG.............................................................................................................1811.001.00-------------------------------------------------1.00-----------------
......................................................................CCCGCCGAGCCGGGGAGG..................................................................................................................................................................1850.801.800.400.20---------0.20-------------------------------------------------------
......................................................................CCCGCCGAGCCGGGGT....................................................................................................................................................................1650.601.800.60------------------------------------------------------------------
...........GCGGCTGCAGGCACC................................................................................................................................................................................................................................1580.380.380.38------------------------------------------------------------------
......................................................................CCCGCCGAGCCGGGGAG...................................................................................................................................................................1750.201.800.20------------------------------------------------------------------
..............GCTGCAGGCACCATGG............................................................................................................................................................................................................................1670.140.14------------------------------------------------------------------0.14
...........GCGGCTGCAGGCACCGGCC............................................................................................................................................................................................................................1980.120.38-0.12-----------------------------------------------------------------
...........GCGGCTGCAGGCACCGGCA............................................................................................................................................................................................................................1980.120.38-0.12-----------------------------------------------------------------
...........GCGGCTGCAGGCACCGGAG............................................................................................................................................................................................................................1980.120.380.12------------------------------------------------------------------
.....................................................................GCCCGCCGAGCCGGG......................................................................................................................................................................1580.120.12--------------------------------------------------------------0.12----

Antisense strand
GCGGGCCCGTTGCGGCTGCAGGCACCATGGACCGAGCCCCCACGGAGCAGGTACGCGGGTTTGGGCTGGGCCCGCCGAGCCGGGGGTTGGGGTCGCCGCTTCCTCACAGGCCAGGCCCAGTTCTCCGAACGTGGGGACCGGGGGCCGGTCCTGCGGCCGCAGACCCCCTCACCTGGGAGCCTGGCAGCTCCCAGCTCTCCTTCATTGTTCCAGCTGCTGCCTGGGACTTGGGGGCTTTTCCAACCCTGAT
................................................................((((((((.(((.....((..((.((.....))))..)).....)))..))))))))........((..((.(((((...)))))))..))...............................................................................................
................................................................65........................................................................................155.............................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532876(GSM532876)
G547T. (cervix)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM532880(GSM532880)
G659T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038860(GSM458543)
MM426. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR040015(GSM532900)
G623T. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
............................................................................................................................................................................................................TTGTTCCAGCTGCTGATCT........................... 193.000.00--1.00------2.00---------------------------------------------------------
............................................................................................................................................................................................................TTGTTCCAGCTGCTGCTC............................ 182.000.00--2.00----------------------------------------------------------------
............................................................................................................................................................................................................TTGTTCCAGCTGCTGGTC............................ 182.000.00--2.00----------------------------------------------------------------
...........................................................................................................................................................................................................ATTGTTCCAGCTGCTGTCT............................ 192.000.00--2.00----------------------------------------------------------------
...........................................................................................................................................................................................................ATTGTTCCAGCTGCTGTCTG........................... 201.000.00----------1.00--------------------------------------------------------
.........................................................................................................................................................................................AGCTCCCAGCTCTCCTTGTC............................................. 201.000.00-----------------1.00-------------------------------------------------
.....................................................................................................................................GGGACCGGGGGCCGGGCG................................................................................................... 1851.000.00------1.00------------------------------------------------------------
....................................CCCCCACGGAGCAGGGG..................................................................................................................................................................................................... 171.000.001.00------------------------------------------------------------------
............................................................................................................................................................................................................TTGTTCCAGCTGCTGGT............................. 171.000.00---------1.00---------------------------------------------------------
............................................................................................................................................................................................................TTGTTCCAGCTGCTGATC............................ 181.000.00--1.00----------------------------------------------------------------
............................................................................................TGGCCTGTGAGGAAGCGGCGA......................................................................................................................................... 2111.001.00-----------------------------------------------------------1.00-------
............................................................................................................................................................................................................TTGTTCCAGCTGCTGCTCT........................... 191.000.00---------------------------------1.00---------------------------------
.............................................................................................................................................GGGCCGGTCCTGCGGGACC.......................................................................................... 191.000.00-----------------------------------------------1.00-------------------
..........................................CCCAGCCCAAACCCGCGTACCTGCTCCG.................................................................................................................................................................................... 2811.001.00-------------1.00-----------------------------------------------------
....................................................................................................................................GGGGACCGGGGGCCGCCT.................................................................................................... 181.000.00-----------------------------------------------------1.00-------------
...........GCGGCTGCAGGCACCAG.............................................................................................................................................................................................................................. 171.000.00--------1.00----------------------------------------------------------
......................................................................CCCCGGCTCGGCGGG..................................................................................................................................................................... 1550.200.200.20------------------------------------------------------------------