uc001zwy.2_intron_0_0_chr15_49031486

TGTAAAAGAATATTTTTAAATGTCCAGCATTGATGTATTTTCTTTAAGAATTATTACAGTATATAAGCATTCTTTGGGAATACAGTATAAAAACATAAATTTTTTCTTATTTTTAATTTTTTTTATTTTTTTGTTCAAGGATGAATCTTCCCTTTAAATATTAATTTTCTCTTAATTTCGTGTTTCCTTGCACATAATAGCACTGCCCCTAACTTCAGAGATGCTGATTGCAGTTAAAAAATCAAAAAGA ......................................................................................(((((((.(((((......................))))).))))))).................................................................................................................... .................................................................................82........................................................140............................................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189784	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR037937(GSM510475) 293cand2. (cell line)	SRR040035(GSM532920) G001T. (cervix)	SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex)
......................................................................................ATAAAAACATAAATTTTT..................................................................................................................................................	18	6	11.67	11.67	3.33	0.67	3.67	2.00	2.00	-	-	-	-	-	-
.....................................................................................TATAAAAACATAAATTTTT..................................................................................................................................................	19	2	9.00	9.00	4.50	1.00	2.50	0.50	0.50	-	-	-	-	-	-
......................................................................................ATAAAAACATAAATTTTTTCTTATTTTTTTG.....................................................................................................................................	31		4.00	0.00	1.00	-	-	1.00	2.00	-	-	-	-	-	-
.....................................................................................TATAAAAACATAAATCTTT..................................................................................................................................................	19		4.00	0.00	1.00	1.00	2.00	-	-	-	-	-	-	-	-
..................................................................................................................AATTTTTTTTATTTTTTTCCTG..................................................................................................................	22		3.00	0.00	-	-	-	2.00	1.00	-	-	-	-	-	-
..............................................................................................................TTTTAATTTTTTTTATTTTTCAG.....................................................................................................................	23		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-
......................................................................................................TTTCTTATTTTTAATTTTTTCCC.............................................................................................................................	23		2.00	0.00	-	-	-	-	-	2.00	-	-	-	-	-
..................................................................................................................AATTTTTTTTATTTTTTTCTTT..................................................................................................................	22		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-
...................................................................................................TTTTTTCTTATTTTTAATTTTTTTTTTG...........................................................................................................................	28		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-
.....................................................................................................TTTTCTTATTTTTAATTTTTTTAAAG...........................................................................................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
............................................................................................................ATTTTTAATTTTTTTTATTTTTCTAG....................................................................................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
............................................................................................................ATTTTTAATTTTTTTTATTTTTTTTAT...................................................................................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.....................................................................................................TTTTCTTATTTTTAATCTTG.................................................................................................................................	20		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-
......................................................................................ATAAAAACATAAATTTTC..................................................................................................................................................	18		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-
...................................................................................................................ATTTTTTTTATTTTTTTGTTCAAGGACG...........................................................................................................	28		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-
...........................................................................................................................TATTTTTTTGTTCAAGGTAGT..........................................................................................................	21		1.00	0.00	-	-	-	-	-	-	-	-	1.00	-	-
...............................................................................................................................................AATCTTCCCTTTAAATATTAATTTTCTCTTAATT.........................................................................	34	1	1.00	1.00	-	-	-	1.00	-	-	-	-	-	-	-
..........................................................................................................TTATTTTTAATTTTTTTTATTTTTG.......................................................................................................................	25		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-
.....................................................................................TATAAAAACATAAATTCTT..................................................................................................................................................	19		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
....................................................................................................TTTTTCTTATTTTTAATTTTTTTTTATG..........................................................................................................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................................................CTTATTTTTAATTTTTTTTATCTC.........................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
................................................................................................................TTAATTTTTTTTATTTTTCAA.....................................................................................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
................................................................................................................................................ATCTTCCCTTTAAATATTAATTTTCTCTTAATT.........................................................................	33	1	1.00	1.00	-	1.00	-	-	-	-	-	-	-	-	-
..................................................................................................................................................................AATTTTCTCTTAATTGTAA.....................................................................	19		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-
............................................................................................................ATTTTTAATTTTTTTTATTTTTTTAG....................................................................................................................	26		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-
............................................................................................................ATTTTTAATTTTTTTTATTTTTAAT.....................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
.....................................................................................................................................................................................................TAGCACTGCCCCTAACTTCAGAGATGCTG........................	29	1	1.00	1.00	-	-	-	-	-	-	-	1.00	-	-	-
........................................................................................................TCTTATTTTTAATTTTTTTTATTTTTTTTTG...................................................................................................................	31		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-
......................................................................................................TTTCTTATTTTTAATTTTTTTTACC...........................................................................................................................	25		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-
..................................................................................................ATTTTTTCTTATTTTTAATG....................................................................................................................................	20		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-
...........................................................................................................TATTTTTAATTTTTTTTATTTTTTTTTA...................................................................................................................	28		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-
.......................................................................................................................TTTTTATTTTTTTGTTCATT...............................................................................................................	20		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-
.............................................................................................CATAAATTTTTTCTTTTTG..........................................................................................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-
..............................................................................................ATAAATTTTTTCTTATT...........................................................................................................................................	17	8	0.12	0.12	-	-	-	-	-	-	-	-	-	-	0.12

TGTAAAAGAATATTTTTAAATGTCCAGCATTGATGTATTTTCTTTAAGAATTATTACAGTATATAAGCATTCTTTGGGAATACAGTATAAAAACATAAATTTTTTCTTATTTTTAATTTTTTTTATTTTTTTGTTCAAGGATGAATCTTCCCTTTAAATATTAATTTTCTCTTAATTTCGTGTTTCCTTGCACATAATAGCACTGCCCCTAACTTCAGAGATGCTGATTGCAGTTAAAAAATCAAAAAGA
......................................................................................(((((((.(((((......................))))).)))))))....................................................................................................................
.................................................................................82........................................................140............................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189784

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR037937(GSM510475)
293cand2. (cell line)

SRR040035(GSM532920)
G001T. (cervix)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

......................................................................................ATAAAAACATAAATTTTT..................................................................................................................................................

11.67

3.33

0.67

3.67

2.00

.....................................................................................TATAAAAACATAAATTTTT..................................................................................................................................................

9.00

4.50

1.00

2.50

0.50

......................................................................................ATAAAAACATAAATTTTTTCTTATTTTTTTG.....................................................................................................................................

4.00

0.00

1.00

2.00

.....................................................................................TATAAAAACATAAATCTTT..................................................................................................................................................

4.00

0.00

1.00

2.00

..................................................................................................................AATTTTTTTTATTTTTTTCCTG..................................................................................................................

3.00

0.00

2.00

1.00

..............................................................................................................TTTTAATTTTTTTTATTTTTCAG.....................................................................................................................

2.00

0.00

2.00

......................................................................................................TTTCTTATTTTTAATTTTTTCCC.............................................................................................................................

2.00

0.00

2.00

..................................................................................................................AATTTTTTTTATTTTTTTCTTT..................................................................................................................

1.00

0.00

1.00

...................................................................................................TTTTTTCTTATTTTTAATTTTTTTTTTG...........................................................................................................................

1.00

0.00

1.00

.....................................................................................................TTTTCTTATTTTTAATTTTTTTAAAG...........................................................................................................................

1.00

0.00

1.00

............................................................................................................ATTTTTAATTTTTTTTATTTTTCTAG....................................................................................................................

1.00

0.00

1.00

............................................................................................................ATTTTTAATTTTTTTTATTTTTTTTAT...................................................................................................................

1.00

0.00

1.00

.....................................................................................................TTTTCTTATTTTTAATCTTG.................................................................................................................................

1.00

0.00

1.00

......................................................................................ATAAAAACATAAATTTTC..................................................................................................................................................

1.00

0.00

1.00

...................................................................................................................ATTTTTTTTATTTTTTTGTTCAAGGACG...........................................................................................................

1.00

0.00

1.00

...........................................................................................................................TATTTTTTTGTTCAAGGTAGT..........................................................................................................

1.00

0.00

1.00

...............................................................................................................................................AATCTTCCCTTTAAATATTAATTTTCTCTTAATT.........................................................................

1.00

..........................................................................................................TTATTTTTAATTTTTTTTATTTTTG.......................................................................................................................

1.00

0.00

1.00

.....................................................................................TATAAAAACATAAATTCTT..................................................................................................................................................

1.00

0.00

1.00

....................................................................................................TTTTTCTTATTTTTAATTTTTTTTTATG..........................................................................................................................

1.00

0.00

1.00

.........................................................................................................CTTATTTTTAATTTTTTTTATCTC.........................................................................................................................

1.00

0.00

1.00

................................................................................................................TTAATTTTTTTTATTTTTCAA.....................................................................................................................

1.00

0.00

1.00

................................................................................................................................................ATCTTCCCTTTAAATATTAATTTTCTCTTAATT.........................................................................

1.00

..................................................................................................................................................................AATTTTCTCTTAATTGTAA.....................................................................

1.00

0.00

1.00

............................................................................................................ATTTTTAATTTTTTTTATTTTTTTAG....................................................................................................................

1.00

0.00

1.00

............................................................................................................ATTTTTAATTTTTTTTATTTTTAAT.....................................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................................................TAGCACTGCCCCTAACTTCAGAGATGCTG........................

1.00

........................................................................................................TCTTATTTTTAATTTTTTTTATTTTTTTTTG...................................................................................................................

1.00

0.00

1.00

......................................................................................................TTTCTTATTTTTAATTTTTTTTACC...........................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTTTTTCTTATTTTTAATG....................................................................................................................................

1.00

0.00

1.00

...........................................................................................................TATTTTTAATTTTTTTTATTTTTTTTTA...................................................................................................................

1.00

0.00

1.00

.......................................................................................................................TTTTTATTTTTTTGTTCATT...............................................................................................................

1.00

0.00

1.00

.............................................................................................CATAAATTTTTTCTTTTTG..........................................................................................................................................

1.00

0.00

1.00

..............................................................................................ATAAATTTTTTCTTATT...........................................................................................................................................

0.12