ID: uc001zwx.1_intron_30_0_chr15_48762954_r.5p
GENE: (35)
chr15:48764548-48764797-


(1)
BREAST 		(7)
CELL-LINE 		(4)
CERVIX 		(1)
HEART 		(1)
HELA 		(1)
LIVER 		(2)
OTHER 		(9)
SKIN 		(1)
UTERUS

Sense strand
TGAATGCGACATGGGCTTCGTGCCCAGTGCTGACGGGAAAGCCTGTGAAGGTAACTGATGGGGAAGCCACTGGGAGCCTTGCTGGGCTTGATGAGATTAGGTTATTTAAACATTCCTGATGCTTTTTTTTTTTTTTTTTTTTAAACTGAGGTGTGTTTTAGCTTCATTTCTAAGCTGGTCAGTTCAGTTTGTAGAGGGATTAGGTTTCCAGCTGACCATTTCTCTTGCTGCACAGAAAACCTCAGCTGAC
...................................................................................................................(((((((((......................((((((........)))))).....))))..)))))....................................................................
.......................................................................................................104.............................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR189784SRR040029(GSM532914)
G026T. (cervix)		SRR343335SRR040034(GSM532919)
G001N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAATT......................................................................................................2710.000.001.006.002.00--1.00---------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTATTAG.......................................................................................................267.000.00-4.003.00------------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAAATG.....................................................................................................284.000.00-2.00--1.001.00---------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACTTAG....................................................................................................293.000.00-1.001.00--1.00---------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTCGAG........................................................................................................283.000.003.00--------------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAAAAT.....................................................................................................283.000.00-2.00--1.00----------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAATTT.....................................................................................................283.000.00-1.001.00--1.00---------------------
............................................................................................................................TTTTTTTTTTTTTTTTTTAAACTCACG...................................................................................................273.000.00--2.00--1.00---------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTCGAG..........................................................................................................263.000.002.00--1.00-----------------------
...........................................................................................................................TTTTTTTTTTTTTTTTTTTAAACTGGGG...................................................................................................283.000.003.00--------------------------
..........................................................................................................................TTTTTTTTTTTTTTTTTTTTAAACTCACG...................................................................................................293.000.00-2.001.00------------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAATTG.....................................................................................................283.000.00-2.001.00------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTAATC........................................................................................................282.000.002.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTAGG..........................................................................................................262.000.001.00--1.00-----------------------
..........................................................................................................................TTTTTTTTTTTTTTTTTTTTAAACGGG.....................................................................................................272.000.002.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTCGGG.........................................................................................................272.000.002.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTCGGC..........................................................................................................262.000.002.00--------------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACTCACG...................................................................................................302.000.00-2.00-------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTCGAG.........................................................................................................272.000.00---2.00-----------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAAAAC.....................................................................................................282.000.00-1.00--1.00----------------------
..................................................................................................................................................................TTCATTTCTAAGCTGCTG......................................................................182.000.00--------1.00-1.00----------------
............................................................................................................................TTTTTTTTTTTTTTTTTTAAACTCGG....................................................................................................262.000.001.00-1.00------------------------
..........................................................................................................................TTTTTTTTTTTTTTTTTTTTAAACGGGG....................................................................................................282.000.00---1.00--1.00--------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAATAT.....................................................................................................282.000.00-1.001.00------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTATT.........................................................................................................271.000.001.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTCGG..........................................................................................................261.000.001.00--------------------------
..........................................................................................................................TTTTTTTTTTTTTTTTTTTTAAACTCATG...................................................................................................291.000.00-1.00-------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTAACTTT......................................................................................................301.000.001.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTAGGA.........................................................................................................271.000.001.00--------------------------
..........................................................................................................................TTTTTTTTTTTTTTTTTTTTAAACTCAAG...................................................................................................291.000.00-1.00-------------------------
..........................................................................................................................TTTTTTTTTTTTTTTTTTTTAAACGGT.....................................................................................................271.000.001.00--------------------------
...............................GACGGGAAAGCCTGTGAAG........................................................................................................................................................................................................1911.001.00-----------------------1.00---
.....................................................................................................................GATGCTTTTTTTTTTTTTTTTTTTTATA.........................................................................................................281.000.00----1.00----------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTAAAGG.......................................................................................................291.000.001.00--------------------------
...........................................................................................................................TTTTTTTTTTTTTTTTTTTAAACTCCCG...................................................................................................281.000.00-----1.00---------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACTCTAA...................................................................................................301.000.00----1.00----------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAATGT.....................................................................................................281.000.00--1.00------------------------
.............................................................................................................................TTTTTTTTTTTTTTTTTAAACTCCCG...................................................................................................261.000.00-1.00-------------------------
....................................................................................................................TGATGCTTTTTTTTTTTTTTTTTTCTGC..........................................................................................................281.000.001.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTATG.........................................................................................................271.000.00-----1.00---------------------
............................................................................................................AACATTCCTGATGCTTTTTTA.........................................................................................................................211.000.00-------------------------1.00-
........................................................................................................................GCTTTTTTTTTTTTTTTTTTTTAAACTTAAG...................................................................................................311.000.00----1.00----------------------
................................................................................................................................................................................................AGAGGGATTAGGTTTCATAG......................................201.000.00----------------1.00----------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACTCTAG...................................................................................................301.000.00------1.00--------------------
.........................................................................................................................................................................................AGTTTGTAGAGGGATTAGGTTTCCAG.......................................2611.001.00------------------1.00--------
...........................................................................................................................TTTTTTTTTTTTTTTTTTTAAACTGGGC...................................................................................................281.000.001.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTCTTG.........................................................................................................271.000.00---1.00-----------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACTCTTG...................................................................................................301.000.00----1.00----------------------
..............................TGACGGGAAAGCCTGTGAAG........................................................................................................................................................................................................2011.001.00--------------------------1.00
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTATTTT.......................................................................................................291.000.001.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTAAATT.......................................................................................................291.000.001.00--------------------------
.......................................................................................................................................................................................................................CCATTTCTCTTGCTGCTAA................191.000.00--------1.00------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTAAGCC.......................................................................................................291.000.001.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTAACT.........................................................................................................271.000.001.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTAGC..........................................................................................................261.000.001.00--------------------------
.......................................................................................................................TGCTTTTTTTTTTTTTTTTTTTTAAAAG.......................................................................................................281.000.001.00--------------------------
.....GCGACATGGGCTTCGTGCCCA................................................................................................................................................................................................................................2111.001.00--------------1.00------------
..........................................................................................................................TTTTTTTTTTTTTTTTTTTTAAACTCCGG...................................................................................................291.000.00--1.00------------------------
........................................................................................................................GCTTTTTTTTTTTTTTTTTTTTAAAATCC.....................................................................................................291.000.00------1.00--------------------
..........................................................................................................................TTTTTTTTTTTTTTTTTTTTAAACGGGC....................................................................................................281.000.00---1.00-----------------------
.......................................................................................................................TGCTTTTTTTTTTTTTTTTTTTTATTTT.......................................................................................................281.000.00--1.00------------------------
......................................................................................................................................................................................................ATTAGGTTTCCAGCTGACCATTTCTCTT........................2811.001.00--------------------1.00------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAACCG.....................................................................................................281.000.001.00--------------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACGT......................................................................................................271.000.00-1.00-------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTATCG.........................................................................................................271.000.001.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTCGCA...........................................................................................................251.000.001.00--------------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACTAAG....................................................................................................291.000.00-1.00-------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTCGGG..........................................................................................................261.000.001.00--------------------------
..............................................GAAGGTAACTGATGGGGAAG........................................................................................................................................................................................2011.001.00----------------------1.00----
.GAATGCGACATGGGCTTCGTGC...................................................................................................................................................................................................................................2211.001.00---------------------1.00-----
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTATACC.......................................................................................................261.000.00---1.00-----------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTAAATGC......................................................................................................301.000.001.00--------------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTATTAC.......................................................................................................261.000.00-1.00-------------------------
....................................................................................................................................TTTTTTTTTTAAACTGAGGCAGG...............................................................................................231.000.00----1.00----------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACTAG.....................................................................................................281.000.00----1.00----------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTATCGG.......................................................................................................261.000.00--1.00------------------------
.................................CGGGAAAGCCTGTGAAG........................................................................................................................................................................................................1711.001.00-------------------1.00-------
...............................................................................................................................TTTTTTTTTTTTTTTAAACTGAAGC..................................................................................................251.000.00---1.00-----------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAACCA.....................................................................................................281.000.00--1.00------------------------
........................................................................................................................GCTTTTTTTTTTTTTTTTTTTTAAAAAG......................................................................................................281.000.00--1.00------------------------
...........................................................................................................................TTTTTTTTTTTTTTTTTTTAAACTCGG....................................................................................................271.000.00-1.00-------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTCAAG..........................................................................................................261.000.00---1.00-----------------------
.......................................................................................................................TGCTTTTTTTTTTTTTTTTTTTTAAAAACA.....................................................................................................301.000.001.00--------------------------
............GGGCTTCGTGCCCAGTCATC..........................................................................................................................................................................................................................201.000.00---------1.00-----------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTCAGC........................................................................................................281.000.00---1.00-----------------------
..................................................................CCACTGGGAGCCTTGCTGGTCT..................................................................................................................................................................221.000.00---------------1.00-----------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAAATT.....................................................................................................281.000.00--1.00------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTAAAG.........................................................................................................271.000.001.00--------------------------
..AATGCGACATGGGCTTC.......................................................................................................................................................................................................................................1711.001.00------------------------1.00--
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTCGG............................................................................................................241.000.001.00--------------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAAACTC.....................................................................................................281.000.001.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTCCCC........................................................................................................281.000.001.00--------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTAAAAGG......................................................................................................301.000.001.00--------------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACTCCAG...................................................................................................301.000.00----1.00----------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTCGG.........................................................................................................271.000.001.00--------------------------
...........................................................................................................................TTTTTTTTTTTTTTTTTTTAAACTCACG...................................................................................................281.000.00--1.00------------------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACTATT....................................................................................................291.000.00----1.00----------------------
..........................................................................................................................TTTTTTTTTTTTTTTTTTTTAAACTCACT...................................................................................................291.000.00--1.00------------------------
......................................................................................................................ATGCTTTTTTTTTTTTTTTTTTTTAAACGG......................................................................................................301.000.001.00--------------------------
......CGACATGGGCTTCGTGCCCAGTG.............................................................................................................................................................................................................................2311.001.00-----------------1.00---------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACTTTTA...................................................................................................301.000.00------1.00--------------------
..AATGCGACATGGGCTTCGTG....................................................................................................................................................................................................................................2011.001.00-------------1.00-------------
.........................................................................................................................CTTTTTTTTTTTTTTTTTTTTAAACTG......................................................................................................2760.330.33-0.170.17------------------------

Antisense strand
TGAATGCGACATGGGCTTCGTGCCCAGTGCTGACGGGAAAGCCTGTGAAGGTAACTGATGGGGAAGCCACTGGGAGCCTTGCTGGGCTTGATGAGATTAGGTTATTTAAACATTCCTGATGCTTTTTTTTTTTTTTTTTTTTAAACTGAGGTGTGTTTTAGCTTCATTTCTAAGCTGGTCAGTTCAGTTTGTAGAGGGATTAGGTTTCCAGCTGACCATTTCTCTTGCTGCACAGAAAACCTCAGCTGAC
...................................................................................................................(((((((((......................((((((........)))))).....))))..)))))....................................................................
.......................................................................................................104.............................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR189784SRR040029(GSM532914)
G026T. (cervix)		SRR343335SRR040034(GSM532919)
G001N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....TGCGACATGGGCTTCGCCC................................................................................................................................................................................................................................... 193.000.00-------3.00-------------------
............................................................................CCTTGCTGGGCTTGATAGCG.......................................................................................................................................................... 201.000.00---1.00-----------------------
.............................................................................................................................................................................................TGTAGAGGGATTAGGCAAG.......................................... 191.000.00----------1.00----------------
.................................CGGGAAAGCCTGTGAGAAT...................................................................................................................................................................................................... 191.000.00---------1.00-----------------
..........................................................................................................................................................................................................................TTTCTCTTGCTGCACAGAGGG........... 211.000.00-----------1.00---------------