ID: uc001zrv.2_intron_7_0_chr15_43865347_r
GENE: (21)
chr15:43865297-43865628-


(1)
AGO2.ip 		(2)
B-CELL 		(2)
BRAIN 		(5)
BREAST 		(11)
CELL-LINE 		(4)
CERVIX 		(3)
LIVER 		(2)
OTHER 		(12)
SKIN 		(1)
TESTES

Sense strand
CCACTGTTGCGGAAGATACTACTTGACCTGCAGAGAACCCACGAGGATGAGTCTGTCAACAAGCTGCATCCCCTGTGAGGGAGGGCTGGGAGGGGTGTTGGATGGAGGGAGGGGCATGTCAGGGAGCCTTGGGGGAATCAAAGCTGGGACAGCCTGGGGAACCAAGAATAGACAAGATTTTGGGATGGAAAGGAGAGAAGTCTTTGAGGTGGGAGGAGGGAGTTTGCAGAAGGGTGGGAACAGGGTTAACTGACTGTGTGAGTGATTTAGCTGTTATCTCAGGTACTCCCGAGGCGTGCTCTCCCCAGGTCGCCACGTTCGAACGCGTCTCT
.....................................................................................((((((.....(((((((..........(((.(((((..(((((((.....(((....(((.((...(((......(((.....((((....((((.........)))).....))))......))).....)))...)).)))...))).....)))))))..)))))))).......))))))).....))))))..................................................
................................................................................81.......................................................................................................................................................................................................282................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR040031(GSM532916)
G013T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029126(GSM416755)
143B. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		TAX577743(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................................................................................................................................................................................GAGTGATTTAGCTGTTGGA......................................................1942.000.0023.006.005.004.00-3.00----1.00---------------------------------
...................................................................................................................................................................................................................................................................GAGTGATTTAGCTGTTGGAT.....................................................204.000.001.002.001.00-----------------------------------------
...................................................................................................................................................................................................................................................................GAGTGATTTAGCTGTTGG.......................................................182.000.002.00-------------------------------------------
...........GAAGATACTACTTGACCTGCAGAGAACCCACGA................................................................................................................................................................................................................................................................................................3322.002.00-------1.00--------------1.00---------------------
....................................................................................................................................................................................................................................................................AGTGATTTAGCTGTTGGA......................................................182.000.001.001.00------------------------------------------
............................................................................GAGGGAGGGCTGGGA.................................................................................................................................................................................................................................................1502.002.00--------------1.00------1.00----------------------
.....................................................................................CTGGGAGGGGTGTTGGGGTT...................................................................................................................................................................................................................................201.000.00----1.00---------------------------------------
.....................................................................................................................................................................................................................................................TTAACTGACTGTGTGAGTGATTTAG..............................................................2521.001.00--------0.50--------------------0.50--------------
.................................................................................AGGGCTGGGAGGGGTGGTC........................................................................................................................................................................................................................................191.000.00-----------1.00--------------------------------
............................................................................................................................................................................................................TGAGGTGGGAGGAGGGATAC............................................................................................................201.000.00----------------1.00---------------------------
...........................................................................................................................................AAAGCTGGGACAGCCTGGGGAACCAAGAACAG.................................................................................................................................................................321.000.00----1.00---------------------------------------
....................................................................................................................................................................................TGGGATGGAAAGGAGAGATTAC..................................................................................................................................221.000.00------1.00-------------------------------------
............................................................................................................................................................................................................................................................ACTGTGTGAGTGATTTAGCTGTTATCCCAG..................................................301.000.00-------------------1.00------------------------
................................................................................GAGGGCTGGGAGGGGTAGGG........................................................................................................................................................................................................................................201.000.00-------------------------1.00------------------
.....................................................................................................................................................................................................................................................................GTGATTTAGCTGTTATCTCAGA.................................................221.000.00--------------------1.00-----------------------
...........................................................................................................................................................................................................................................GGGAACAGGGTTAACATCG..............................................................................191.000.00-------------1.00------------------------------
..........................................................................GTGAGGGAGGGCTGGGCTA...............................................................................................................................................................................................................................................191.000.00------------1.00-------------------------------
............................................................................................................................................................................................................TGAGGTGGGAGGAGGTAT..............................................................................................................181.000.00------------------------1.00-------------------
........................................................................................................................................................................................................................................................ACTGACTGTGTGAGTGTGTG................................................................201.000.00----1.00---------------------------------------
..............GATACTACTTGACCTGCAGAGAACCC....................................................................................................................................................................................................................................................................................................2621.001.00------------------1.00-------------------------
...................................................................................................................................................................................................................GGAGGAGGGAGTTTGTTCT......................................................................................................191.000.00---------------1.00----------------------------
............................................................................................................................................................................................................TGAGGTGGGAGGAGGGAGTTCGC.........................................................................................................231.000.00----1.00---------------------------------------
............................................................................GAGGGAGGGCTGGGAGGGCAA...........................................................................................................................................................................................................................................211.000.00-----------------------1.00--------------------
..................................................................CATCCCCTGTGAGGGAGGGCTG....................................................................................................................................................................................................................................................2220.500.50-------------------------------------0.50------
...........................................................................................................................................................................................................................................................GACTGTGTGAGTGATTTAG..............................................................1920.500.50--------0.50-----------------------------------
.........................................................................................................................................................................................................................GGGAGTTTGCAGAAGGGTGGGA.............................................................................................2220.500.50---------------------------------------0.50----
....................................ACCCACGAGGATGAGTCTGTCAACA...............................................................................................................................................................................................................................................................................2520.500.50------------------------------0.50-------------
...............................AGAGAACCCACGAGGATGAGTC.......................................................................................................................................................................................................................................................................................2220.500.50---------0.50----------------------------------
............AAGATACTACTTGACCTGCAGAGAACCCACGAGGAT............................................................................................................................................................................................................................................................................................3620.500.50---------------------------0.50----------------
.......................TGACCTGCAGAGAACCCACG.................................................................................................................................................................................................................................................................................................2020.500.50------0.50-------------------------------------
.......TGCGGAAGATACTACTTGAC.................................................................................................................................................................................................................................................................................................................2020.500.50--------------------------------0.50-----------
....TGTTGCGGAAGATACTACT.....................................................................................................................................................................................................................................................................................................................1920.500.50---------0.50----------------------------------
.........CGGAAGATACTACTTGACCTGCA............................................................................................................................................................................................................................................................................................................2320.500.50-----------------------------------------0.50--
...CTGTTGCGGAAGATACTACTTGACC................................................................................................................................................................................................................................................................................................................2520.500.50-0.50------------------------------------------
.......................................CACGAGGATGAGTCTGTC...................................................................................................................................................................................................................................................................................1820.500.50------0.50-------------------------------------
.....................................................................................................................................................................................................................................................TTAACTGACTGTGTGAGTGATTTAGCTG...........................................................2820.500.50--------------------------------------0.50-----
.....................................CCCACGAGGATGAGTCTGTC...................................................................................................................................................................................................................................................................................2020.500.50------0.50-------------------------------------
....................................................................................................................................................................................................................................................GTTAACTGACTGTGTGAGT.....................................................................1920.500.50-----------------------------------0.50--------
.........................................................AACAAGCTGCATCCCCT..................................................................................................................................................................................................................................................................1720.500.50----------------------------------------0.50---
..................................GAACCCACGAGGATGAGTCTGTCAACAAGCTGC.........................................................................................................................................................................................................................................................................3320.500.50----------------------------------0.50---------
................................................................................................................................................................................................................................................CAGGGTTAACTGACTGTGTGAGTGAT..................................................................2620.500.50-------0.50------------------------------------
.......................................CACGAGGATGAGTCTGTCAACAAGCTGCA........................................................................................................................................................................................................................................................................2920.500.50---------0.50----------------------------------
.................................................................................................................................................................................................................................................AGGGTTAACTGACTGTGTGAGTG....................................................................2320.500.50--------0.50-----------------------------------
......................................................................................................................................................................................................................................................................................TCAGGTACTCCCGAGGCGT...................................1920.500.50------------------------------------0.50-------
.....................CTTGACCTGCAGAGAAC......................................................................................................................................................................................................................................................................................................1720.500.50-------------------------------0.50------------
.....GTTGCGGAAGATACT........................................................................................................................................................................................................................................................................................................................1520.500.50---------------------------------0.50----------
..................................................................................................................................................................................................................................................................................TATCTCAGGTACTCC...........................................1570.140.14-------------------------------------------0.14

Antisense strand
CCACTGTTGCGGAAGATACTACTTGACCTGCAGAGAACCCACGAGGATGAGTCTGTCAACAAGCTGCATCCCCTGTGAGGGAGGGCTGGGAGGGGTGTTGGATGGAGGGAGGGGCATGTCAGGGAGCCTTGGGGGAATCAAAGCTGGGACAGCCTGGGGAACCAAGAATAGACAAGATTTTGGGATGGAAAGGAGAGAAGTCTTTGAGGTGGGAGGAGGGAGTTTGCAGAAGGGTGGGAACAGGGTTAACTGACTGTGTGAGTGATTTAGCTGTTATCTCAGGTACTCCCGAGGCGTGCTCTCCCCAGGTCGCCACGTTCGAACGCGTCTCT
.....................................................................................((((((.....(((((((..........(((.(((((..(((((((.....(((....(((.((...(((......(((.....((((....((((.........)))).....))))......))).....)))...)).)))...))).....)))))))..)))))))).......))))))).....))))))..................................................
................................................................................81.......................................................................................................................................................................................................282................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR040031(GSM532916)
G013T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029126(GSM416755)
143B. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038857(GSM458540)
D20. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		TAX577743(Rovira)
total RNA. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................................................................................................................................................................................GCGTGCTCTCCCCAGGGT..................... 181.000.00-----------------1.00--------------------------
..............................................................................GGGAGGGCTGGGAGGGGCC........................................................................................................................................................................................................................................... 191.000.00--------------------------1.00-----------------
...................................................................................................................................................................................................................................................................GAGTGATTTAGCTGTCA........................................................ 171.000.001.00-------------------------------------------
..............................................................................................CATGCCCCTCCCTCCATCCAACAC...................................................................................................................................................................................................................... 2420.500.50----------------------------0.50---------------
....................................................................................................................................................................................................................................CCCTGTTCCCACCCTTC....................................................................................... 1730.330.33------------------------------------------0.33-