ID: uc001zrj.1_intron_1_0_chr15_43656581_r.3p
GENE: ZSCAN29(2)
chr15:43656531-43656780-


(6)
B-CELL
(3)
BREAST
(48)
CELL-LINE
(3)
FIBROBLAST
(3)
HEART
(4)
HELA
(4)
LIVER
(1)
OTHER
(2)
RRP40.ip
(43)
SKIN
(1)
TESTES
(3)
UTERUS
(2)
XRN.ip

Sense strand
CTCTGTGAAATTGCTAAAGGATATAAAGAAGCAAAACATTCTATACTGAGTTTGTGGATTTTGGAAACATGAAGTATTTTTACTTTTTCATCTAGGAGCCTGAGCTTAGGTGAATTCTCATGATGCAGATGATAGGACTGAGGAATTCAGGCTCTAAAGCTCTGGATTAAGTGGTGCTGAAATTTCTCTTCTGGTGGCAGGTGTACACTGGGGCTATGAAGAGACCAAGACTTACCTTGCAATTCTTAGT
......................................................((.(((.(((((....((((((....)))))).(((((((((........))))))))).))).)).))).))...........................................................................................................................
..................................................51.......................................................................................140............................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189785GSM339994(GSM339994)
hues6. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359192(GSM359192)
HepG2_3pM_6. (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037931(GSM510469)
293GFP. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR029127(GSM416756)
A549. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM359193(GSM359193)
HepG2_3pM_7. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359206(GSM359206)
HepG2_tot_low. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR029131(GSM416760)
MCF7. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
...................................................................................................................TCTCATGATGCAGATGATAGGACTGAGG...........................................................................................................281555.00555.00159.00108.0027.0031.0010.009.008.0012.002.008.002.0014.006.004.006.005.00-11.001.0013.005.005.002.009.00-5.008.002.006.004.004.001.002.004.001.005.001.002.002.003.003.004.001.003.00-1.00----1.002.002.002.002.00-1.001.00--1.001.002.003.00-2.001.00-2.00--1.00-1.002.00---1.001.00------1.00-1.00-------------1.001.00---1.00---1.00-----1.00----
..................................................................................................................TTCTCATGATGCAGATGATAGGACTGAGG...........................................................................................................291422.00422.00128.005.005.0026.0021.0019.0017.0013.003.0011.0015.00-8.0011.0010.0010.00-1.001.00-5.007.009.00--5.002.007.003.00-3.006.004.00-6.002.006.004.004.00-3.001.004.002.00-1.00---2.00-1.001.002.00--1.001.00------3.001.001.002.00--------1.00--1.002.001.00-2.00-----1.00-1.00-1.001.001.001.001.00--1.001.00----1.00-------1.001.00------
...................................................................................................................TCTCATGATGCAGATGATAGGACTGAG............................................................................................................27146.0046.0019.008.00--1.001.00-1.00---1.00-----1.00-----------3.00---2.00-------1.00--1.00----1.003.00---------------------------1.00--------------------------1.00----------1.00-----
...................................................................................................................TCTCATGATGCAGATGATAGGACTGAGA...........................................................................................................28123.0046.001.005.0012.00-----1.00--1.00---------------------------3.00----------------------------------------------------------------------------------
..................................................................................................................TTCTCATGATGCAGATGATAGGACTGA.............................................................................................................27122.0022.001.004.00--1.001.00--4.00-1.00-1.00---1.00-1.00-1.00--------1.00---------------1.00-------------------------1.00-1.00-----------1.00------------------------1.00-----------
...................................................................................................................TCTCATGATGCAGATGATAGGACTGA.............................................................................................................26119.0019.00--5.00-2.00---3.00---1.00-----3.00----2.00------------------------------------1.00-1.00-------------------------------------------------1.00---------
..................................................................................................................TTCTCATGATGCAGATGATAGGACTGAG............................................................................................................28118.0018.003.002.003.00-----3.001.00----------1.00------------------------1.00-----1.00------------------------1.00-----2.00---------------------------------------
....................................................................................................................................TAGGACTGAGGAATTCAGGCTCTAAAGCTCTGGATTAAGTGGTGCTGAAATTTCTCTTCTGGTGGCAG..................................................68111.0011.00------------------------11.00-------------------------------------------------------------------------------------------------
...................................................................................................................TCTCATGATGCAGATGATAGG..................................................................................................................21110.0010.001.001.001.00-------------------------------------------4.00----------------------2.00---------------------------------------1.00------------
..................................................................................................................TTCTCATGATGCAGATGATAGGACTGAAA...........................................................................................................2918.0022.00--7.00--------------1.00--------------------------------------------------------------------------------------------------------
....................................................................................................................CTCATGATGCAGATGATAGGACTGAGG...........................................................................................................2716.006.003.002.00----------------------------------------------------------------------1.00-------------------------------------------------
.....................................................................................................................TCATGATGCAGATGATAGGACTGAGG...........................................................................................................2616.006.00----------------2.00-2.00-----------------------------------------1.00-----------1.00-------------------------------------------------
...........................................................................................................................................................................................................TACACTGGGGCTATGAAGAGACC........................2315.005.00------------------5.00-------------------------------------------------------------------------------------------------------
...................................................................................................................TCTCATGATGCAGATGATAGGA.................................................................................................................2215.005.00----------------------------------------------------------3.001.00--------------------------------------------1.00-----------------
..................................................................................................................TTCTCATGATGCAGATGATAGGA.................................................................................................................2314.004.00--------3.00------------------------------------------------------------------------------------------1.00----------------------
.......................................................................................................................ATGATGCAGATGATAGGACTGAGG...........................................................................................................2414.004.00-2.00----1.00---------------1.00---------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................ACTTACCTTGCAATTCAG...184.000.00--------------------------------------------1.00---3.00-------------------------------------------------------------------------
...................................................................................................................TCTCATGATGCAGATGAT.....................................................................................................................1813.003.00-1.00-----------------------------------------------------1.00--------------1.00---------------------------------------------------
...................................................................................................................TCTCATGATGCAGATGATA....................................................................................................................1913.003.00-----------------------------------------------1.00-------1.00------------------------------------1.00-----------------------------
..........................................................................................................TAGGTGAATTCTCATGATGCAGATGATAGG..................................................................................................................3013.003.00----------------3.00---------------------------------------------------------------------------------------------------------
..................................................................................................................TTCTCATGATGCAGATGATAGG..................................................................................................................2213.003.001.00--------------------------------------------------------------------------1.00------------------------------------------1.00---
...................................................................................................................TCTCATGATGCAGATGATAGGACTTAGG...........................................................................................................283.000.00-----------------1.00------------1.00---------------------1.00---------------------------------------------------------------------
...................................................................................................................TCTCATGATGCAGATGATAGGACTGAA............................................................................................................2713.0019.00--1.00--------1.00-1.00------------------------------------------------------------------------------------------------------------
.............................................................................................AGGAGCCTGAGCTTAGGTGAA........................................................................................................................................2113.003.00-----------------------------------------------3.00--------------------------------------------------------------------------
..................................................................................................................TTCTCATGATGCAGATGAT.....................................................................................................................1912.002.00-----------------------------------------------------------2.00--------------------------------------------------------------
.............................................................................................................................CAGATGATAGGACTGAGGAAT........................................................................................................2112.002.00-------------------------------------------------------------2.00------------------------------------------------------------
..................................................................................................................TTCTCATGATGCAGATGATAGGACTGAGGAAA........................................................................................................322.000.00---------------1.00-----------------------------------------------------------------1.00----------------------------------------
...................................................................................................................TCTCATGATGCAGATGATAGGACTGAGGAAA........................................................................................................312.000.00-----------------------------------------------------------------------------2.00--------------------------------------------
...................................................................................................................TCTCATGATGCAGATGA......................................................................................................................1712.002.00----------------------------------------------------------------------1.00----1.00----------------------------------------------
...........................................................................................................................TGCAGATGATAGGACTGAGG...........................................................................................................2011.001.00---------------------------------1.00----------------------------------------------------------------------------------------
................................................................................................................................ATGATAGGACTGAGGAATTCAGGCTC................................................................................................2611.001.00----------------1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................................GATGATAGGACTGAGG...........................................................................................................1631.001.00----0.33-0.33----------------------0.33--------------------------------------------------------------------------------------------
.................................................................................................................................TGATAGGACTGAGGAATTCAGGCAC................................................................................................251.000.00----------------1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................TAGGTGAATTCTCATGATGCAGATGATA....................................................................................................................2811.001.00----------------1.00---------------------------------------------------------------------------------------------------------
.............................................................................................................................CAGATGATAGGACTGAGGAATTCAGGCTC................................................................................................2911.001.00----------------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................TTCTCATGATGCAGATGATAGGACTAAGG...........................................................................................................2911.001.00---1.00----------------------------------------------------------------------------------------------------------------------
...........................................................................................................AGGTGAATTCTCATGATGCAGAT........................................................................................................................2311.001.00---------------------------------------------------------------------------------------1.00----------------------------------
..........................................................................................................................................TGAGGAATTCAGGCTCTAAAGCTCTGGA....................................................................................2811.001.00----------------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................TTCTCATGATGCAGATG.......................................................................................................................1721.001.000.50------------------------------------------------------0.50------------------------------------------------------------------
......................................................TGGATTTTGGAAACATGAAGTATT............................................................................................................................................................................2411.001.00------------1.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................TTCTCATGATGCAGATGATAGGACT...............................................................................................................2511.001.00----------------1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TGTACACTGGGGCTATGAAGAGACC........................2511.001.00----------------1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................TGAGGAATTCAGGCTCTAA.............................................................................................1911.001.00------------------------------------------------------1.00-------------------------------------------------------------------
...............................................................................................................................GATGATAGGACTGAGGAATTCAG....................................................................................................2311.001.00------------------1.00-------------------------------------------------------------------------------------------------------
...................................................................................................................TCTCATGATGCAGATGATAGGACTG..............................................................................................................2511.001.001.00-------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................AGATGATAGGACTGAGTT..........................................................................................................181.000.00------------------------------------------------------------------------------------1.00-------------------------------------
..................................................................................................................TTCTCATGATGCAGATGATAG...................................................................................................................2111.001.00--------1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................CAGATGATAGGACTGAGGAA.........................................................................................................2011.001.00--------------------------------------------------------------------------------------------------1.00-----------------------
...........................................................................................................................TGCAGATGATAGGACTGAGGAATTCAGGC..................................................................................................2911.001.00----------------1.00---------------------------------------------------------------------------------------------------------
...................................................................................................................TCTCATGATGCAGATGATAG...................................................................................................................2011.001.00-------------------------------------------------------1.00------------------------------------------------------------------
....................................................................................................................CTCATGATGCAGATGATAGGACTG..............................................................................................................2411.001.00------------------------------------------------------1.00-------------------------------------------------------------------
..................................................................................................................TTCTCATGATGCAGATGATAGGACTGAA............................................................................................................2811.0022.00--------------------------------------------------------1.00-----------------------------------------------------------------
..............................................................................................................TGAATTCTCATGATGCAGATGATAGG..................................................................................................................2611.001.00----------------1.00---------------------------------------------------------------------------------------------------------
................................................................................................................................ATGATAGGACTGAGGCA.........................................................................................................171.000.00------------------------------------------------------------------------------------------1.00-------------------------------
...................................................................................................................TCTCATGATGCAGATGATAGGAC................................................................................................................2311.001.00-----------------------------------------------------------------------------------------------------------------1.00--------
..................................................................................................................TTCTCATGATGCAGATGATAGGACTGAGT...........................................................................................................2911.0018.00-1.00------------------------------------------------------------------------------------------------------------------------
.................................................................................................................ATTCTCATGATGCAGATGATAGGACTGAGG...........................................................................................................3011.001.001.00-------------------------------------------------------------------------------------------------------------------------
....................................CATTCTATACTGAGTCCC....................................................................................................................................................................................................181.000.00--------------------------------1.00-----------------------------------------------------------------------------------------
..........................................................................................................................................TGAGGAATTCAGGCTGCCT.............................................................................................191.000.00--------------------------------------------1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................................ACTTACCTTGCAATTCTAG..191.000.00------------------------------------------------1.00-------------------------------------------------------------------------
...................................................................................................................TCTCATGATGCAGATGATAGGACTGAGGA..........................................................................................................2911.001.00-------------------------------------------------1.00------------------------------------------------------------------------
................................................................................................................................ATGATAGGACTGAGGCCC........................................................................................................181.000.00---------------------------------------------------------1.00----------------------------------------------------------------
...............................................................................................................................................................................................................CTGGGGCTATGAAGAGACCAAGAC...................2420.500.50------------------------------------------------------------------------------------------------------------0.50-------------
............................................................................TTTTTACTTTTTCATCTA............................................................................................................................................................1820.500.50-----------------------------------------------------------------------------------------------------------------------0.50--
...............................................................................................................................................................................................................CTGGGGCTATGAAGAGACCAAG.....................2220.500.50------------------------------------------------------------------------------------------------------------0.50-------------
........................................................................................................................................................TCTAAAGCTCTGGATT..................................................................................1660.330.33-------------------------------------------------------------------------------------0.33------------------------------------
...............................................................................................................................................................................................................CTGGGGCTATGAAGAGAC.........................1830.330.33------------------------------------------------------------------------------------0.33-------------------------------------
.........................................................................................................................................................CTAAAGCTCTGGATT..................................................................................1590.220.22-------------0.11---------------0.11--------------------------------------------------------------------------------------------
................AAGGATATAAAGAAGC..........................................................................................................................................................................................................................1650.200.20----------------0.20---------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................TACACTGGGGCTATG................................1560.170.17------------------------------------------------------------------------------------------------------------------------0.17-
.............................................................................................................................................................................................................CACTGGGGCTATGAAG.............................1680.120.12------------------------------------------------------------------0.12-------------------------------------------------------
.........................................................................................................................................................CTAAAGCTCTGGATTTAG...............................................................................1890.110.22-------------------------------------------------------------------------------------------------------------------------0.11

Antisense strand
CTCTGTGAAATTGCTAAAGGATATAAAGAAGCAAAACATTCTATACTGAGTTTGTGGATTTTGGAAACATGAAGTATTTTTACTTTTTCATCTAGGAGCCTGAGCTTAGGTGAATTCTCATGATGCAGATGATAGGACTGAGGAATTCAGGCTCTAAAGCTCTGGATTAAGTGGTGCTGAAATTTCTCTTCTGGTGGCAGGTGTACACTGGGGCTATGAAGAGACCAAGACTTACCTTGCAATTCTTAGT
......................................................((.(((.(((((....((((((....)))))).(((((((((........))))))))).))).)).))).))...........................................................................................................................
..................................................51.......................................................................................140............................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189785GSM339994(GSM339994)
hues6. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR207117(GSM721079)
Whole cell RNA. (cell line)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359192(GSM359192)
HepG2_3pM_6. (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR029125(GSM416754)
U2OS. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM416733(GSM416733)
HEK293. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037931(GSM510469)
293GFP. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR029127(GSM416756)
A549. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR038855(GSM458538)
D10. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM359193(GSM359193)
HepG2_3pM_7. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM359206(GSM359206)
HepG2_tot_low. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR029131(GSM416760)
MCF7. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR553574(SRX182780)
source: Heart. (Heart)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.....................................................................TGAAGTATTTTTACTAAAG.................................................................................................................................................................. 191.000.00--------------------------------------------1.00-----------------------------------------------------------------------------