ID: uc001zof.1_intron_7_0_chr15_41860561_f.3p
GENE: (8)
chr15:41860876-41861125+


(2)
AGO1.ip 		(3)
B-CELL 		(11)
BRAIN 		(4)
BREAST 		(16)
CELL-LINE 		(3)
HEART 		(1)
HELA 		(3)
LIVER 		(2)
OTHER 		(17)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
CCTTGTTTGTGTTCTGGAGAGGCCCCTGCAGCCGGGAACAGGAATGTGATTACTCCCAGAAGGTTGTGTTCCTGCAGCCCCTGAACCCACAGTGCCCCTATACTCCCATGTTCCCAGCTGGACCTTTTTCTGTCCTCAGGCCCCAGCTGGAGGCCTTCTCCCCAGGCTCACTATGGGGTGGGGGCTTTTCCTGGCTGCAGGATGAGCTGACAGTGGAGGGGACCAGGGCCAATTTGACAGGCTGGGATCC
...............................................................................................................................................(((((((((((((((.(((((.........))))).)))))))..))).))))).....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189783SRR189782GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR191469(GSM715579)
117genomic small RNA (size selected RNA from . (breast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189786SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCCCC.......................................................................................2215.005.00-1.00--------1.00-------------------1.00--------------------1.00--1.00-----------
..............................................................................................................................................CCAGCTGGAGGCCTTCTCCCAT......................................................................................225.000.005.00-----------------------------------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTC..........................................................................................1915.005.00---1.00--------1.00----1.00--1.00-----------1.00---------------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCTCCCC.......................................................................................2314.004.00-------1.00-------------------------------------1.00---1.001.00---------------
...............................................................................................................................................CAGCTGGAGGCCTTCTCCCCAT.....................................................................................223.000.003.00-----------------------------------------------------------------
...............................................................................................................................................CAGCTGGAGGCCTTCTCCCCT......................................................................................212.000.00--------2.00---------------------------------------------------------
..............................................................................................................................................CCAGCTGGAGGCCTTCTGAAA.......................................................................................212.000.00-----2.00------------------------------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCCCCAT.....................................................................................2412.001.00---------------1.00-----1.00--------------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTA..........................................................................................1912.001.00---1.00------------------------------------------1.00-------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCTCA.........................................................................................2112.002.00--1.00----1.00----------------------------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCA.........................................................................................2012.005.00-1.00---1.00------------------------------------------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCTC..........................................................................................2012.002.00---------------------------1.001.00-------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCT.........................................................................................2012.005.00--1.00-----------------------1.00---------------------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCTA..........................................................................................2012.001.00---------2.00--------------------------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCCC........................................................................................2112.002.00--1.00--------------------------------------------------1.00------------
..............................................................................................................................................CCAGCTGGAGGCCTTCTCCCCA......................................................................................2211.001.00-1.00----------------------------------------------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCTCCCCAT.....................................................................................251.000.00----------------------------------------1.00-------------------------
..............................................................................................................................................CCAGCTGGAGGCCTTCTCCCCTTAC...................................................................................2511.001.00----1.00-------------------------------------------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCTCC.........................................................................................2111.001.00----------------------------------1.00-------------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCTCCCA.......................................................................................231.000.00------1.00-----------------------------------------------------------
..........................................................................................................................................GGCCCCAGCTGGAGGACA..............................................................................................181.000.00-----------1.00------------------------------------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCTCG.........................................................................................2111.002.00-------------1.00----------------------------------------------------
.................................................................................................................................................................................GTGGGGGCTTTTCCTGGCTGCAGA.................................................2411.001.00------1.00-----------------------------------------------------------
......................................................CCCAGAAGGTTGTGTAGGG.................................................................................................................................................................................191.000.00-------1.00----------------------------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCCCA.......................................................................................2211.002.00--1.00---------------------------------------------------------------
...................................................................................................................................................................................................................AGTGGAGGGGACCAGGGCC....................1911.001.00------------------------1.00-----------------------------------------
.............................................................................................................................................................................TGGGGTGGGGGCTTTAGAG..........................................................191.000.00----1.00-------------------------------------------------------------
..............................................................................................................................................CCAGCTGGAGGCCTTCTCCCCCTT....................................................................................2411.001.00-----------------------------------------------1.00------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCTCCCCT......................................................................................2411.004.00------------1.00-----------------------------------------------------
....................................AACAGGAATGTGATTATTG...................................................................................................................................................................................................191.000.00----1.00-------------------------------------------------------------
........................................................................................................................................................................................................GATGAGCTGACAGTGGAGGGGAC...........................2311.001.00-------------1.00----------------------------------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTC............................................................................................1811.001.00-------------------------1.00----------------------------------------
..............................................................................................................................................CCAGCTGGAGGCCTTCTCCCC.......................................................................................2111.001.00-------------------------------------------------------1.00----------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCCAA.......................................................................................2211.001.00-----------------------------------1.00------------------------------
.................................................................................................................................................................................GTGGGGGCTTTTCCTGGCTGA....................................................211.000.00---1.00--------------------------------------------------------------
...........................................................................................................................................................................................................GAGCTGACAGTGGAGTATC............................191.000.00-------------------1.00----------------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCAA........................................................................................2111.005.00--1.00---------------------------------------------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTAAA..........................................................................................201.000.00-----------------------------1.00------------------------------------
.....................................ACAGGAATGTGATTACTCCCAGAAGG...........................................................................................................................................................................................2611.001.00--------------------------------------------------------1.00---------
.................................................................................................................................................................................GTGGGGGCTTTTCCTGGCTGCAG..................................................2311.001.00------1.00-----------------------------------------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCTCCCAT......................................................................................241.000.00---------------------------------------------------------1.00--------
...............................................................................................................................................CAGCTGGAGGCCTTCTCCCT.......................................................................................201.000.00-1.00----------------------------------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCT...........................................................................................1811.001.00------------------------------------1.00-----------------------------
......................................CAGGAATGTGATTACTCCCAGAAGG...........................................................................................................................................................................................2511.001.00----------------1.00-------------------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCCCTTT.....................................................................................2411.002.00----------1.00-------------------------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCC.........................................................................................2011.001.00--------------1.00---------------------------------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCCCCTTC....................................................................................2511.005.00-------------------------------------------1.00----------------------
.................................................................................................................................................................................................................ACAGTGGAGGGGACCGAGA......................191.000.00--------------------------------------1.00---------------------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCCTCAA.....................................................................................2411.001.00-1.00----------------------------------------------------------------
.................................................................................................................................................................................GTGGGGGCTTTTCCTGGCTGCAGTA................................................2511.001.00----------------------------------------------------------1.00-------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCCCCT......................................................................................2311.005.00----------------------1.00-------------------------------------------
.....................................ACAGGAATGTGATTATTGA..................................................................................................................................................................................................191.000.00-------------------------------------1.00----------------------------
................................................................................................................................................................................GGTGGGGGCTTTTCCTGGCTGCAGA.................................................251.000.00--------------1.00---------------------------------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCT...........................................................................................1911.001.00----------------------------------------------------1.00-------------
..........................................................................................................................................GGCCCCAGCTGGAGGACC..............................................................................................181.000.00-----------1.00------------------------------------------------------
...............................................................................................................................................CAGCTGGAGGCCTTCGTTT........................................................................................191.000.00---------------------------------------1.00--------------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTCATT.........................................................................................2111.001.00---------------------------------1.00--------------------------------
.................................................................................................................................................................................GTGGGGGCTTTTCCTGGCTGCAA..................................................231.000.00------------------------------------------------1.00-----------------
.............................................................................................................................................CCCAGCTGGAGGCCTTCTCCCCA......................................................................................2311.001.00------------------------------------------1.00-----------------------
............................................................................................................................................CCCCAGCTGGAGGCCTTA............................................................................................181.000.00-------------------------------1.00----------------------------------
..........................................................................................................................................................................................................................GGGACCAGGGCCAATTTGACAGG.........2320.500.50---------------0.50--------------------------------------------------
....................................................................................................................................................................................................................................CCAATTTGACAGGCTGGGA...1920.500.50------------------------------------------------------------0.50-----
................................................................................................................................................................................................................GACAGTGGAGGGGACCA.........................1720.500.50---------------0.50--------------------------------------------------
..........................................................................................................................CCTTTTTCTGTCCTCAG...............................................................................................................1740.250.25---------------------------------------------------------------0.25--
......................................CAGGAATGTGATTACT....................................................................................................................................................................................................1640.250.25-----------------0.25------------------------------------------------

Antisense strand
CCTTGTTTGTGTTCTGGAGAGGCCCCTGCAGCCGGGAACAGGAATGTGATTACTCCCAGAAGGTTGTGTTCCTGCAGCCCCTGAACCCACAGTGCCCCTATACTCCCATGTTCCCAGCTGGACCTTTTTCTGTCCTCAGGCCCCAGCTGGAGGCCTTCTCCCCAGGCTCACTATGGGGTGGGGGCTTTTCCTGGCTGCAGGATGAGCTGACAGTGGAGGGGACCAGGGCCAATTTGACAGGCTGGGATCC
...............................................................................................................................................(((((((((((((((.(((((.........))))).)))))))..))).))))).....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189783SRR189782GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189784GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR037935(GSM510473)
293cand3. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)		SRR191469(GSM715579)
117genomic small RNA (size selected RNA from . (breast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189786SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................................................AAAGGTCCAGCTGGGA........................................................................................................................... 1631.671.67----------------0.33------------------------------------------0.67-0.330.33---
...........................................................................................................................CTTTTTCTGTCCTCAGCG............................................................................................................. 181.000.00-----------------------------------------1.00------------------------
.....................................................................TCCTGCAGCCCCTGAATAG.................................................................................................................................................................. 191.000.00-1.00----------------------------------------------------------------
.....................................................................TCCTGCAGCCCCTGAAGAA.................................................................................................................................................................. 191.000.00--------------------------------------------1.00---------------------
............................................................................................................................TTTTTCTGTCCTCAGGA............................................................................................................. 171.000.00------------------1.00-----------------------------------------------
................................................................TGTGTTCCTGCAGCCCCCC....................................................................................................................................................................... 191.000.00---1.00--------------------------------------------------------------
.....................................................................................................ACTCCCATGTTCCCAGGAGT................................................................................................................................. 201.000.00-----------------------1.00------------------------------------------
....................................................................................TAGGGGCACTGTGGGT...................................................................................................................................................... 1650.200.20----------------------------------------------------------------0.20-
...........................................................................................................................CCTGAGGACAGAAAAAG.............................................................................................................. 1760.170.17-----------------------------------------------------------------0.17