ID: uc001znk.2_intron_5_0_chr15_41501786_r.5p
GENE: (4)
chr15:41507773-41508022-


(1)
AGO1.ip OTHER.mut
(3)
AGO2.ip
(4)
B-CELL
(3)
BRAIN
(23)
CELL-LINE
(2)
CERVIX
(1)
HELA
(3)
LIVER
(2)
OTHER
(3)
SKIN
(1)
XRN.ip

Sense strand
AGGTGACATACACAGTCATTAATCAATTCCAGCAGAAGTTTGGTGCTGCGGTAAGTATTGTCCTCAATCATTACTAGTATTGCCTGTATGTAGGTATCATGTCTGTGTGTCATAAATTTCTTTCTTTCTTTTTTTTTTTGAGACGGAGTCTTGCTCTATCGCCCAGGTTGGAGTGCAGTGGACCAATCTTGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACACCCTTCTCCTGCCTCAGCCTCCCGTGT
.........................................................................................................................((((.((((.........)))).))))..(((.((((((((((.....)).)))..))))).)))................................................................
..............................................................................................................111........................................................................186..............................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTCTTG..............................................................................................................258.000.00--1.003.003.001.00---------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTAATG.............................................................................................................268.000.00--2.002.00-2.00-2.00-------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTTCG..............................................................................................................258.000.00--2.004.00-1.00-1.00-------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTTTTCTTG............................................................................................................286.000.00---1.002.003.00---------------------------------------
.......................................................................................................................................TTTTGAGACGGAGTCTTGCTCTAAATC........................................................................................275.000.00------5.00--------------------------------------
.............................................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTGGGT...................................265.000.005.00--------------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTTTTTCTTG...........................................................................................................294.000.00--1.002.001.00----------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTTTCTTG.............................................................................................................274.000.00--2.00-1.001.00---------------------------------------
.................................................................................................................AAATTTCTTTCTTTCTTCG......................................................................................................................193.000.00--1.001.001.00----------------------------------------
.................................................................................................................AAATTTCTTTCTTTCTTTTTTTTTTTCCG............................................................................................................293.000.00---2.00-1.00---------------------------------------
.............................................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCCAGGCAC..............................313.000.003.00--------------------------------------------
.............................................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTGGG....................................253.000.003.00--------------------------------------------
..........................................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTCGGGT..................................302.000.00-2.00-------------------------------------------
..........................................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTGGG....................................282.000.001.001.00-------------------------------------------
................................................................................................................TAAATTTCTTTCTTTCTTTTTTTTTTTG..............................................................................................................2812.002.00----1.001.00---------------------------------------
.................................AGAAGTTTGGTGCTGGTTC......................................................................................................................................................................................................192.000.00--------2.00------------------------------------
...............................................................................................................................................................CGCCCAGGTTGGAGTGCAGTAAG....................................................................232.000.00--------------------------------1.00--------1.00---
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTTTCTTG...........................................................................................................282.000.00--1.00-1.00----------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTTCCTG............................................................................................................272.000.00-----2.00---------------------------------------
.............................................................................................................TCATAAATTTCTTTCTTTCTTTTTTTTTTTTG.............................................................................................................321.000.00----1.00----------------------------------------
...............................................................................................................................................................CGCCCAGGTTGGAGTGCAGTGGAAA..................................................................251.000.00----------------------1.00----------------------
.........................................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCGTTC.....................................281.000.001.00--------------------------------------------
..........................................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTCCCCGGA................................321.000.001.00--------------------------------------------
.........................................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCCTCGGGG..................................311.000.001.00--------------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTTCCTG..............................................................................................................261.000.00-------1.00-------------------------------------
..............................................................................................................................................................TCGCCCAGGTTGGAGTGCAGTGTAT...................................................................251.000.00------------------------------------1.00--------
.............................................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCAGCT.................................281.000.00-1.00-------------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTTTTCCTG............................................................................................................281.000.00----1.00----------------------------------------
...............................................................................................................ATAAATTTCTTTCTTTCTTTTTTTTTTTG..............................................................................................................2911.001.00-----1.00---------------------------------------
............................................................................................................................TTTCTTTTTTTTTTTGATCAC.........................................................................................................211.000.00-------1.00-------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTTTTTAACG...........................................................................................................291.000.00--1.00------------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTGTA..............................................................................................................251.000.001.00--------------------------------------------
................................................................................................................TAAATTTCTTTCTTTCTTTTTTTTTTTTCTG...........................................................................................................311.000.00--1.00------------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTTCTCC............................................................................................................271.000.001.00--------------------------------------------
............................................................................................................................TTTCTTTTTTTTTTTGAGACGGAGTCGCTT................................................................................................301.000.00-1.00-------------------------------------------
..........................................................................................................................................................................................TCTTGGCTCACTGCAAGCTCCGCCTCCGGGC.................................311.000.001.00--------------------------------------------
.................................................................................................................................................................................................................................CTTCTCCTGCCTCAGCCTCTAT...221.000.00---------------------1.00-----------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTTTCAAG...........................................................................................................281.000.00--1.00------------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTTTTTAACT...........................................................................................................291.000.001.00--------------------------------------------
.....................................................................................................................TTCTTTCTTTCTTTTTTTTTTTGAGACGGAGTG....................................................................................................331.000.00-1.00-------------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTTTCTAG...........................................................................................................281.000.00--1.00------------------------------------------
................................................................................................................TAAATTTCTTTCTTTCTTTTTTCTTG................................................................................................................261.000.00----1.00----------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTATTG...............................................................................................................251.000.00---1.00-----------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTCTCG...............................................................................................................241.000.00---1.00-----------------------------------------
........................................................................................................................................................................................................AAGCTCCGCCTCCCAGGTTCACATA.........................251.000.00----------------1.00----------------------------
....................................................................................................................TTTCTTTCTTTCTTTTTTTTTTTGTGTA..........................................................................................................281.000.001.00--------------------------------------------
.............................................................................................................................TTCTTTTTTTTTTTGATCT..........................................................................................................191.000.00----1.00----------------------------------------
............................CCAGCAGAAGTTTGGTGC............................................................................................................................................................................................................1811.001.00----------1.00----------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTATG.................................................................................................................221.000.00----1.00----------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTTTTTCCCT...........................................................................................................291.000.00--1.00------------------------------------------
.............................................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCCAGCTCC..............................311.000.00-1.00-------------------------------------------
.............................................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCCAGGGC...............................301.000.00-1.00-------------------------------------------
.................................................................................................................AAATTTCTTTCTTTCTTTTTTTGCT................................................................................................................251.000.001.00--------------------------------------------
...................................................................................................................................................................................................ACTGCAAGCTCCGCCTCCGG...................................201.000.00-----------------------------1.00---------------
.............................................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCCAGCTC...............................301.000.00-1.00-------------------------------------------
............................................................................................................................TTTCTTTTTTTTTTTGAGACGGAGTCCGGC................................................................................................301.000.001.00--------------------------------------------
.....................................................................................................................................................................................................TGCAAGCTCCGCCTCCCAGCTGA..............................231.000.001.00--------------------------------------------
..............................................................................................................................................................TCGCCCAGGTTGGAGTGCAGTGGGTG..................................................................261.000.001.00--------------------------------------------
........................................................................................................................TTTCTTTCTTTTTTTTTTTGAGACGGACT.....................................................................................................291.000.00-1.00-------------------------------------------
..............................................................................................................................................................TCGCCCAGGTTGGAGTGCGTCA......................................................................221.000.001.00--------------------------------------------
..........................................................................................................................TCTTTCTTTTTTTTTTTGAGACGGAGTCTTGTT...............................................................................................331.000.00-1.00-------------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTTGCC.............................................................................................................261.000.00-1.00-------------------------------------------
...............................................................................................................................................................CGCCCAGGTTGGAGTGCAGTGTTTA..................................................................251.000.00-------------1.00-------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTTTTTCCG............................................................................................................281.000.00--1.00------------------------------------------
..............................................................................................................................TCTTTTTTTTTTTGAGACGGAGTCCCCT................................................................................................281.000.00-1.00-------------------------------------------
.............................................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTCCGGGC.................................281.000.001.00--------------------------------------------
.........................................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCCTTGG....................................291.000.001.00--------------------------------------------
................................................................................................................................................................................................................................CCTTCTCCTGCCTCAGCC........1801.001.00---------1.00-----------------------------------
................................................................................................................TAAATTTCTTTCTTTCTTTTTTTTTCG...............................................................................................................271.000.00---1.00-----------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTGGA...................................................................................................................211.000.001.00--------------------------------------------
..........................................................................................................................TCTTTCTTTTTTTTTTTGAACG..........................................................................................................221.000.00----1.00----------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTTTCCG............................................................................................................271.000.00--1.00------------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTTTTTCTTC...........................................................................................................291.000.001.00--------------------------------------------
.......................................................................................................................CTTTCTTTCTTTTTTTTTTTGAGAGTG........................................................................................................271.000.001.00--------------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTCG..................................................................................................................221.000.00---1.00-----------------------------------------
.............................................................................................................................TTCTTTTTTTTTTTGAGACGGAGTCGCAC................................................................................................291.000.00-1.00-------------------------------------------
.............................................................................................................................................................................................TGGCTCACTGCAAGCTCCGCCTAGGT...................................261.000.001.00--------------------------------------------
...............................................................................................................................CTTTTTTTTTTTGAGACGGAGTGGG..................................................................................................251.000.00-1.00-------------------------------------------
...................................................................................................................................................................................................ACTGCAAGCTCCGCCTCCCAGGTCCAG............................271.000.001.00--------------------------------------------
.................................................................................................................AAATTTCTTTCTTTCTTTTTTTTTTTCG.............................................................................................................281.000.00----1.00----------------------------------------
..........................................................................................................................TCTTTCTTTTTTTTTTTGAGACGGGGTC....................................................................................................281.000.001.00--------------------------------------------
.........................................................................................................................................................................................ATCTTGGCTCACTGCAAGCCGCC..........................................231.000.001.00--------------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTCCG...............................................................................................................241.000.00---1.00-----------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTTTGCT............................................................................................................271.000.00-1.00-------------------------------------------
........................................................................................................................TTTCTTTCTTTTTTTTTTTGAGACGGAGGC....................................................................................................301.000.001.00--------------------------------------------
............................................................................................................................TTTCTTTTTTTTTTTGAGACGGAGCTTC..................................................................................................281.000.00------------------1.00--------------------------
.........................................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCCGGGG....................................291.000.001.00--------------------------------------------
.............................................................................................................................TTCTTTTTTTTTTTGAGACGGAGTCGGTT................................................................................................291.000.00-1.00-------------------------------------------
.................................................................................................................AAATTTCTTTCTTTCTTTTTTTTTTCAG.............................................................................................................281.000.00--1.00------------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTCTG................................................................................................................231.000.00--1.00------------------------------------------
.........................................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCCTCGG....................................291.000.001.00--------------------------------------------
...............................................................................................................................................................CGCCCAGGTTGGAGTGCAGTGGAAG..................................................................251.000.00-----------------------------------1.00---------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTTTCTGG...........................................................................................................281.000.00--1.00------------------------------------------
..............................................................................................TATCATGTCTGTGTGGAA..........................................................................................................................................181.000.00-------------------------1.00-------------------
.........................................................................................................................................................................................ATCTTGGCTCACTGCAAGCTCCGCCTTCGA...................................301.000.001.00--------------------------------------------
..................................................................................................................................................................CCAGGTTGGAGTGCAGTGCGGA..................................................................221.000.001.00--------------------------------------------
...................................................................................................................................................................CAGGTTGGAGTGCAGTGGAAAC.................................................................221.000.00----------------1.00----------------------------
..........................................................................................................................................................TCTATCGCCCAGGTTGGAGTGCAGCAGT....................................................................281.000.001.00--------------------------------------------
....................................................................................................................TTTCTTTCTTTCTTTTTTTTTTTGTGC...........................................................................................................271.000.00-1.00-------------------------------------------
.....................ATCAATTCCAGCAGAAAGAT.................................................................................................................................................................................................................201.000.00--------------------1.00------------------------
............................................................................................................................TTTCTTTTTTTTTTTGAGACGGCGCG....................................................................................................261.000.00-1.00-------------------------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTGACG.............................................................................................................261.000.001.00--------------------------------------------
.........................................................................................................................TTCTTTCTTTTTTTTTTTGATGGC.........................................................................................................241.000.00-1.00-------------------------------------------
..................................................................................................................AATTTCTTTCTTTCTTTTTTTTTTATTG............................................................................................................281.000.00-----1.00---------------------------------------
.......................................................................................................................................................................................CAATCTTGGCTCACTGCAAGCTCCGCCTGGGT...................................321.000.001.00--------------------------------------------
.................................................................................................................AAATTTCTTTCTTTCTTTTTTTTTTCCG.............................................................................................................281.000.00----1.00----------------------------------------
..................................................................................................................................................................................................CACTGCAAGCTCCGCCTCCCAGGTAA..............................261.000.00--------------------------------------------1.00
..................................................................................................................................................................................................CACTGCAAGCTCCGCCTCCCAGGTTATA............................281.000.00---------------1.00-----------------------------
...................................................................................................................ATTTCTTTCTTTCTTTTTTTTTTTGAGACGG........................................................................................................3160.170.17-0.17-------------------------------------------

Antisense strand
AGGTGACATACACAGTCATTAATCAATTCCAGCAGAAGTTTGGTGCTGCGGTAAGTATTGTCCTCAATCATTACTAGTATTGCCTGTATGTAGGTATCATGTCTGTGTGTCATAAATTTCTTTCTTTCTTTTTTTTTTTGAGACGGAGTCTTGCTCTATCGCCCAGGTTGGAGTGCAGTGGACCAATCTTGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACACCCTTCTCCTGCCTCAGCCTCCCGTGT
.........................................................................................................................((((.((((.........)))).))))..(((.((((((((((.....)).)))..))))).)))................................................................
..............................................................................................................111........................................................................186..............................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR040037(GSM532922)
G243T. (cervix)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
..........................................................................................................................................................................................................GCTCCGCCTCCCAGGTTCCGC........................... 212.000.00-2.00-------------------------------------------
............................................................................................................................................................................................................TCCGCCTCCCAGGTTCACACACAA...................... 242.000.00--------------2.00------------------------------
........................................................................................................................................................GCTCTATCGCCCAGGTCTG............................................................................... 192.000.00---------------------------------------1.00---1.00-
.........................................................................................................................................................................................................AGCTCCGCCTCCCAGGTGCGG............................ 212.000.00-2.00-------------------------------------------
.....................................................................................................................................................................................................................................TCCTGCCTCAGCCTCCCGTGTTG 232.000.00-2.00-------------------------------------------
....................................................................................................................................................................................................................................CTCCTGCCTCAGCCTCCCGTGTGACC 262.000.002.00--------------------------------------------
.................................................................................................................................................................................................................................AGGCTGAGGCAGGAGAAG....... 1801.001.00-----------1.00---------------------------------
...........................................................................................................................CTTTCTTTTTTTTTTTGAGACGGAGGATG.................................................................................................. 291.000.00----------1.00----------------------------------
....................................................................................................................................................................................................................................CTCCTGCCTCAGCCTCCCGTGGACC 251.000.001.00--------------------------------------------
..............................................................................................................................................................................................GGCTCACTGCAAGCTCCGCCTCTTT................................... 251.000.00-------------------1.00-------------------------
..................................................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCGTACGC 261.000.00-1.00-------------------------------------------
.........................................................................................................................................................CTCTATCGCCCAGGTTGGAGTGCAAACC..................................................................... 281.000.001.00--------------------------------------------
........................................................................................................................................................................................................................GTTCACACCCTTCTCCAGCA.............. 201.000.00------------------------------------------1.00--
......................................................................................................................................................................................................GCAAGCTCCGCCTCCCAGGTTCCCC........................... 251.000.00-1.00-------------------------------------------
.......................................................................................................................................................................................................................................CTGCCTCAGCCTCCCGTAGGG 211.000.00-1.00-------------------------------------------
.......................................................................................................................................................................................................CAAGCTCCGCCTCCCAGGTTGAGA........................... 241.000.00---------------1.00-----------------------------
....................................................................................................................................................................................................................................CTCCTGCCTCAGCCTCCCGTGTGAG 251.000.00-1.00-------------------------------------------
..................................................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCGTAG 241.000.00-1.00-------------------------------------------
......................................................................................................................................................................................................GCAAGCTCCGCCTCCCAGGTTTGCG........................... 251.000.00-1.00-------------------------------------------
........................................................................................................................................................................................................................................TGCCTCAGCCTCCCGTGTCGGG 221.000.00-1.00-------------------------------------------
...............................................................................................................................................................................................................................CCCTTCTCCTGCCTCAGCCTCCGAA.. 251.000.00-----------------1.00---------------------------
.......................................................................................................................................................................................................GGTGTGAACCTGGGAGGCGGAGCTTG......................... 2601.001.00-----------1.00---------------------------------
.........................................................................................................................................................................................................AGCTCCGCCTCCCAGGGAG.............................. 191.000.00------------------------1.00--------------------
.................................................................................................................................................................................................TCACTGCAAGCTCCGCCTCCCAGGA................................ 251.000.00------------1.00--------------------------------
....................................................................................................................................................................................................TGTGAACCTGGGAGGCGGAGCTTGCAG........................... 2701.001.00---------1.00-----------------------------------
...................................................................................................................................................................................................................................TCTCCTGCCTCAGCCTCCCGTTC 231.000.00-1.00-------------------------------------------
......................................................................................................................................................................................................................................CCTGCCTCAGCCTCCCGTGTGC 221.000.00-1.00-------------------------------------------
..............................................................................................................................................................TCGCCCAGGTTGGAGTGCAGTGCG.................................................................... 241.000.001.00--------------------------------------------
.............................................................................................................................................................ATCGCCCAGGTTGGAGTGCAGTGTTTT.................................................................. 271.000.00-------------1.00-------------------------------
....................................................................................................................................................................................................................................CTCCTGCCTCAGCCTCCCGTGTGAGC 261.000.00-1.00-------------------------------------------
.....................................................................................................................................................................................................................................TCCTGCCTCAGCCTCCCGTGTAGG 241.000.00-1.00-------------------------------------------
..........................................................................................................................................................................................................................TCACACCCTTCTCCTGCT.............. 181.000.00----------------------------------1.00----------
..................................................................................................................................................................................................CACTGCAAGCTCCGCCTCCCAGGTTTGTT........................... 291.000.001.00--------------------------------------------
..................................................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCGTATG 251.000.00-1.00-------------------------------------------
....................................................................................................................................................................................................CTGCAAGCTCCGCCTCCCAGGTTAT............................. 251.000.00----------------------------1.00----------------
....................................................................................................................................................................................................CTGCAAGCTCCGCCTCCCAGGTAGCA............................ 261.000.00---------------------------------1.00-----------
......................................................................................................................................................................................................GCAAGCTCCGCCTCCCAGGTTCGC............................ 241.000.00-1.00-------------------------------------------
.................................................................................................................................................................................................TCACTGCAAGCTCCGCCTCCCAGGTTCACGC.......................... 311.000.00-1.00-------------------------------------------
.........................................................................................................................................................................................................AGCTCCGCCTCCCAGGTTCCGG........................... 221.000.001.00--------------------------------------------
..............................................................................................................................................................TCGCCCAGGTTGGAGTGCAGTGA..................................................................... 231.000.00--------------------------1.00------------------
.........................................................................................................................................................................................................AGCTCCGCCTCCCAGGTTCAGCGG......................... 241.000.001.00--------------------------------------------
.........................................................................................................................................................................................................AGCTCCGCCTCCCAGGTGCG............................. 201.000.00-1.00-------------------------------------------
..........................................................................................................................................................................................................GCTCCGCCTCCCAGGTTCACTCC......................... 231.000.00-1.00-------------------------------------------
..........................................................................................................................................................................................................GCTCCGCCTCCCAGGTTCACAA.......................... 221.000.00--------------------------------------1.00------
......................................................................................................................................................................................................................................CCTGCCTCAGCCTCCCGTGTGTG 231.000.00-1.00-------------------------------------------
....................................................................................................................................................................................................................................CTCCTGCCTCAGCCTCCCGTGTGGTC 261.000.00-1.00-------------------------------------------
..................................................................................................................................................................................................................................TTCTCCTGCCTCAGCCTCCCGTGTCCTC 281.000.001.00--------------------------------------------
.........................................................................................................................................................................................................AGCTCCGCCTCCCAGGTTGCGG........................... 221.000.001.00--------------------------------------------
.................................................................................................................................................................................................................CTCCCAGGTTCACACTGGT...................... 191.000.00-----------------------1.00---------------------
.................................................................................................................................................................................................TCACTGCAAGCTCCGCCTCCCAGGTTCCGG........................... 301.000.001.00--------------------------------------------
............................................................................................................................................................................................................TCCGCCTCCCAGGTTCACTTAA........................ 221.000.00---------------------------1.00-----------------
...................................................................................................................................................................................................................................TCTCCTGCCTCAGCCTCCCGTGTCTGC 271.000.001.00--------------------------------------------
............................................................................................................................................................................................................GGTGTGAACCTGGGAGGCGGA......................... 2101.001.00-------------------------------------1.00-------
...................................................................................................................................................................................................................................TCTCCTGCCTCAGCCTCCCGTCC 231.000.00----------------------------------------1.00----
...............................................................................................................................................................................................................................GAGGCTGAGGCAGGAGAAGGG...... 2101.001.00------------1.00--------------------------------
..........................................................................................................................................................................................................GCTCCGCCTCCCAGGTTCACTT.......................... 221.000.00-1.00-------------------------------------------
..........................................................................................................................................................................................................GCTCCGCCTCCCAGGTTCAAA........................... 211.000.00-1.00-------------------------------------------
.................................................................................................................................................................................................................................CTTCTCCTGCCTCAGCCTCCCGTCCCT 271.000.001.00--------------------------------------------
................................................................................................................................................................................................................................CCTTCTCCTGCCTCATAT........ 181.000.00-------------------------------1.00-------------
...................................................................................................................................................................................................................................TCTCCTGCCTCAGCCTCCCGTGTTC 251.000.00-1.00-------------------------------------------
...............................................................................................................................................................CGCCCAGGTTGGAGTGCAGTTTT.................................................................... 231.000.00------------------------------1.00--------------
..............................................................................................................................................................................................GTGAACCTGGGAGGCGGAGCTTGCAGTGAGCC............................ 3201.001.00---------1.00-----------------------------------
............................................................................................................................................................................................TTGGCTCACTGCAAGCTCCGTGA....................................... 231.000.00----------1.00----------------------------------
..........................................................................................................................................................................................................GCTCCGCCTCCCAGGTTCACTGA......................... 231.000.00--------1.00------------------------------------
....................................................................................................................................................................................................................................CTCCTGCCTCAGCCTCCCGTGTGCT 251.000.001.00--------------------------------------------
....................................................................................................................................................................................................................................CTCCTGCCTCAGCCTCCCGTGAAC 241.000.001.00--------------------------------------------