ID: uc001zmv.1_intron_0_0_chr15_41099870_f.5p
GENE: ZFYVE19(1)
chr15:41099820-41100069+


(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(13)
B-CELL 		(2)
BRAIN 		(14)
BREAST 		(34)
CELL-LINE 		(3)
CERVIX 		(2)
FIBROBLAST 		(5)
HEART 		(2)
HELA 		(9)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(26)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
GCCGCTGCCGTACGCTGGCTGCAGGAGAGCGTCCGGATTCCCTGCTCTAGGTCGCGGCGGGACAGTGCCAGTGGGCGTGTGGGGCGGGGCAGGGCAGGGAAGGGAAGGGCGGAGCTGGGGTGAGGGTCCAAGGGGCCCAGGACTTGGCCGGCGTGATCTCAGCTCTGCAGACCCTGCGGTGCTGGGAGCCACCATGGAGAGTAGGTGCTACGGCTGCGCTGTCAAGTTCACCCTCTTCAAGAAGGAGGCG
.......................................................................................((((..((((((.........(((((((((((((..((((((...)))))).((......))......)))))))))))))...))))))..))))...................................................................
....................................................................................85................................................................................................183.................................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		TAX577739(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR038862(GSM458545)
MM472. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040009(GSM532894)
G727T. (cervix)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR038861(GSM458544)
MM466. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
.........................................................................................CAGGGCAGGGAAGGGAAGGGCA...........................................................................................................................................22120.005.00-5.002.00-3.00------1.001.00--3.00-1.00----------1.00------------------1.00-----------------1.00-1.00-------------------------------------------------
.........................................................................................CAGGGCAGGGAAGGGAAGGGCG...........................................................................................................................................2218.008.001.00-1.00---1.00--------------------------1.00--------------1.00-------1.00-------1.00-----------------1.00----------------------------------
.......................................................................TGGGCGTGTGGGGCGGGGCAGGGC...........................................................................................................................................................2418.008.003.00------------------------2.00--------------------1.00------------1.00-------------------------1.00-------------------------------
.........................................................................................CAGGGCAGGGAAGGGAAGGGC............................................................................................................................................2115.005.001.001.00----1.00----1.00-1.00-------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CTCAGCTCTGCAGACCCTGCGG.......................................................................2214.004.00---4.00-----------------------------------------------------------------------------------------------------------------
...............................................................................TGGGGCGGGGCAGGGCAGGGAA.....................................................................................................................................................2214.004.00-1.00---------------1.00--------------------------1.00-----------------------1.00------------------------------------------------
.........................................................................................CAGGGCAGGGAAGGGAAGGGCAA..........................................................................................................................................2314.005.00-1.001.00------------------------2.00-----------------------------------------------------------------------------------------
.........................................................................................CAGGGCAGGGAAGGGAAGGGCGT..........................................................................................................................................2313.008.00--------------3.00------------------------------------------------------------------------------------------------------
......................................................................................................................................GCCCAGGACTTGGCCGGCG.................................................................................................1913.003.00----------3.00----------------------------------------------------------------------------------------------------------
.................................................................................................................................................GGCCGGCGTGATCTCAGCTCTGCAGAC..............................................................................2712.002.00----------------------------------------1.00--------------------------------1.00-------------------------------------------
.............GCTGGCTGCAGGAGAGCGTC.........................................................................................................................................................................................................................2012.002.00----------------1.00--------------------------------------------1.00-------------------------------------------------------
.........................................CTGCTCTAGGTCGCGGCGGGA............................................................................................................................................................................................2112.002.00--2.00------------------------------------------------------------------------------------------------------------------
.....................................................................................................GGGAAGGGCGGAGCTGGGGTGAGGGT...........................................................................................................................2612.002.00-------------1.00------------------------------------------------------------1.00------------------------------------------
................................................................................................................................CAAGGGGCCCAGGACTTGGCCGGCGTGATCTCAG........................................................................................3412.002.00-------------------------------------------1.00------------------------------------------------1.00------------------------
.......................................................................................................................................CCCAGGACTTGGCCGGC..................................................................................................1712.002.00-----2.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GGCGTGATCTCAGCTCTGCAGACCC............................................................................2512.002.00-------2.00-------------------------------------------------------------------------------------------------------------
..............................................................................................CAGGGAAGGGAAGGGCGGAG........................................................................................................................................2012.002.00-----------------------------1.00------------------------------------------------1.00--------------------------------------
.................................................................................................GGAAGGGAAGGGCGGATT.......................................................................................................................................182.000.00----------------------2.00----------------------------------------------------------------------------------------------
....................................................................................CGGGGCAGGGCAGGGAAGGG..................................................................................................................................................2031.671.67-----------0.33------------------0.33-0.33---------------------------------------------------------------0.33------0.33-------------
....................................................................................CGGGGCAGGGCAGGGAAGGGAA................................................................................................................................................2221.501.50-----------------------------------------------------------------------------------------------0.50--0.50---0.50--------------
...............................................................................................AGGGAAGGGAAGGGCGGAGC.......................................................................................................................................2011.001.00-----------------------------1.00---------------------------------------------------------------------------------------
.....................................TTCCCTGCTCTAGGTCGC...................................................................................................................................................................................................1811.001.00-------1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................................GGGTCCAAGGGGCCCAGGACTTGGCCGGCGTG...............................................................................................3211.001.00---------------------1.00-----------------------------------------------------------------------------------------------
.......................................................................TGGGCGTGTGGGGCGGGGCAGGG............................................................................................................................................................2311.001.00----------------------------------------------------------------------------------------1.00----------------------------
.............................................................................TGTGGGGCGGGGCAGGGCAGGGAAGT...................................................................................................................................................261.000.00-------------------------------1.00-------------------------------------------------------------------------------------
...........................................................................................................................................................ATCTCAGCTCTGCAGACCCTGCG........................................................................2311.001.00-----------------------------------------------------------------------1.00---------------------------------------------
.......................................................................................................GAAGGGCGGAGCTGGCA..................................................................................................................................171.000.00------------------------------------------------------1.00--------------------------------------------------------------
..........................................................................................................................................AGGACTTGGCCGGCGTGATCTCAGCT......................................................................................2611.001.00----1.00----------------------------------------------------------------------------------------------------------------
...............................................TAGGTCGCGGCGGGACAG.........................................................................................................................................................................................1811.001.00------------------1.00--------------------------------------------------------------------------------------------------
..........................................................................................................................................AGGACTTGGCCGGCGTGATCTCAGC.......................................................................................2511.001.00---------1.00-----------------------------------------------------------------------------------------------------------
.........................................................CGGGACAGTGCCAGTGGGCG.............................................................................................................................................................................2011.001.00------------------------1.00--------------------------------------------------------------------------------------------
............................................................................................................GCGGAGCTGGGGTGAGGGTTA.........................................................................................................................211.000.00------------------------------------------------------------------------1.00--------------------------------------------
..........................................................................................................GGGCGGAGCTGGGGTGAG..............................................................................................................................1811.001.00----------------------------------------------------------------------------------------------1.00----------------------
..............................................................................................CAGGGAAGGGAAGGGCG...........................................................................................................................................1711.001.001.00--------------------------------------------------------------------------------------------------------------------
...................TGCAGGAGAGCGTCCGGAT....................................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------------------1.00--------------------------------
.................................................................................................................................AAGGGGCCCAGGACTTGGCCGGCGTG...............................................................................................2611.001.00--------------------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTGGGAGCCACCATGGAGAGTAGGTGCTAC.......................................3011.001.00-----------------------1.00---------------------------------------------------------------------------------------------
......................................................................GTGGGCGTGTGGGGCGGGGCAGGGCAG.........................................................................................................................................................2711.001.00---------------------------------------------------1.00-----------------------------------------------------------------
..............................................................................................CAGGGAAGGGAAGGGCGGAGCTGGG...................................................................................................................................2511.001.00--------------------------------------------------1.00------------------------------------------------------------------
......GCCGTACGCTGGCTGCAGGAGAGCG...........................................................................................................................................................................................................................2511.001.00--------------------------1.00------------------------------------------------------------------------------------------
...................................................................................................AAGGGAAGGGCGGAGGGA.....................................................................................................................................181.000.00-------------------------------------------------------1.00-------------------------------------------------------------
...................................................................................................AAGGGAAGGGCGGAGCTGGG...................................................................................................................................2011.001.00-----------------------------------------------------------------------------------------1.00---------------------------
..............................................................................................................................................................TCAGCTCTGCAGACCCT...........................................................................1721.001.00------------------------------------------------------------1.00--------------------------------------------------------
.....................CAGGAGAGCGTCCGGAT....................................................................................................................................................................................................................1711.001.00------1.00--------------------------------------------------------------------------------------------------------------
....................................................................................CGGGGCAGGGCAGGGAAGG...................................................................................................................................................1931.001.00----------------------------------0.67---------------------------------------------------------------------0.33------------
..............................................................................................................................................................................TGCGGTGCTGGGAGCCACCATGGAGAGT................................................2811.001.00-------------------------------------------------1.00-------------------------------------------------------------------
..............................................................................................................................................................................................ACCATGGAGAGTAGGTACTA........................................201.000.00-------------------1.00-------------------------------------------------------------------------------------------------
.............................................................................................GCAGGGAAGGGAAGGGCG...........................................................................................................................................1811.001.00--------------------------------------------------------------------------------------1.00------------------------------
..............................................CTAGGTCGCGGCGGGA............................................................................................................................................................................................1611.001.00------------------------------1.00--------------------------------------------------------------------------------------
..............CTGGCTGCAGGAGAGCGTC.........................................................................................................................................................................................................................1911.001.00------1.00--------------------------------------------------------------------------------------------------------------
.........................................................................................CAGGGCAGGGAAGGGAAGAGCT...........................................................................................................................................221.000.00------------1.00--------------------------------------------------------------------------------------------------------
....................................................................................CGGGGCAGGGCAGGGAAGGGTA................................................................................................................................................2231.001.67------------------------------0.330.67-------------------------------------------------------------------------------------
..............................................................................................................................................................................................ACCATGGAGAGTAGGTGCTACGG.....................................2311.001.00---1.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................ATGGAGAGTAGGTGCTACGGC....................................2111.001.00-------------------1.00-------------------------------------------------------------------------------------------------
.......................................................................................................................................CCCAGGACTTGGCCGGCG.................................................................................................1811.001.00---------------------------------------------------------------------------1.00-----------------------------------------
.................................................................................................................................AAGGGGCCCAGGACTTGGC......................................................................................................1911.001.00--------------------------1.00------------------------------------------------------------------------------------------
....................................................................................................................................GGGCCCAGGACTTGGCCGGC..................................................................................................2011.001.00---------------------------------------------1.00-----------------------------------------------------------------------
..........................................................................................................................AGGGTCCAAGGGGCCCAGGACTTGGCCGGC..................................................................................................3011.001.00-------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................GGAAGGGAAGGGCGGAGCTG.....................................................................................................................................2011.001.00------------------------------------------------------------------------------------------1.00--------------------------
...................................................................................................................................................................................................GGAGAGTAGGTGCTAC.......................................1621.001.00----------------------------------------------------------------------------------------------------0.500.50---------------
..........................................................................................................................................AGGACTTGGCCGGCGTGATCT...........................................................................................2111.001.00---------1.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................AGGACTTGGCCGGCGTGATCTCA.........................................................................................2311.001.00---------1.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................GCCCAGGACTTGGCCGGCGTG...............................................................................................2111.001.00--------------------1.00------------------------------------------------------------------------------------------------
....................................................................................................................................................CGGCGTGATCTCAGCTCTGCAGA...............................................................................2311.001.00--------1.00------------------------------------------------------------------------------------------------------------
..................................................................GCCAGTGGGCGTGTGGGGC.....................................................................................................................................................................1911.001.00---------------------------------------------------------------------------------1.00-----------------------------------
........CGTACGCTGGCTGCAAG.................................................................................................................................................................................................................................171.000.00-----------------------1.00---------------------------------------------------------------------------------------------
.........................................................................................CAGGGCAGGGAAGGGAAGGGCTA..........................................................................................................................................2311.005.00-------------------------------------------------------------------------------------------1.00-------------------------
....................................................................................................................................................CGGCGTGATCTCAGCTCTGCAGACC.............................................................................2511.001.00-----1.00---------------------------------------------------------------------------------------------------------------
....................................................................CAGTGGGCGTGTGGGGCGGAA.................................................................................................................................................................211.000.00-----------------------------------------------------------------------------1.00---------------------------------------
........................................................................GGGCGTGTGGGGCGGGGCAGGG............................................................................................................................................................2211.001.001.00--------------------------------------------------------------------------------------------------------------------
...................TGCAGGAGAGCGTCCCCGG....................................................................................................................................................................................................................191.000.00------------------------------------------------------------------1.00--------------------------------------------------
......................................................................................................................................GCCCAGGACTTGGCCGGC..................................................................................................1811.001.00-------------------------------------1.00-------------------------------------------------------------------------------
.................................CGGATTCCCTGCTCT..........................................................................................................................................................................................................1511.001.00----------------------------------------------------------------------------1.00----------------------------------------
..............................................................................................................................................................TCAGCTCTGCAGACCCTG..........................................................................1811.001.00------------------------------------1.00--------------------------------------------------------------------------------
...............................TCCGGATTCCCTGCTCTA.........................................................................................................................................................................................................1811.001.00------------------1.00--------------------------------------------------------------------------------------------------
....................................................................CAGTGGGCGTGTGGGGCGGGGCA...............................................................................................................................................................2311.001.00---------------------------------------------------------------------------------------1.00-----------------------------
....................................................................................................AGGGAAGGGCGGAGCTAGTT..................................................................................................................................201.000.00----------------------------------------------------------1.00----------------------------------------------------------
.........................................................................................CAGGGCAGGGAAGGGAAGGGCGA..........................................................................................................................................2311.008.00---------------------------------------------------------------------------------------------1.00-----------------------
.........................................................................................CAGGGCAGGGAAGGGAAGGGCGAA.........................................................................................................................................2411.008.00--------1.00------------------------------------------------------------------------------------------------------------
.......................................................................TGGGCGTGTGGGGCGGGGCGGGG............................................................................................................................................................231.000.00-----------------------------------1.00---------------------------------------------------------------------------------
..............................................................................................................................................................................................ACCATGGAGAGTAGGTGCTACGGCTGCGCTGT............................3211.001.00--------------------------------------------------------------1.00------------------------------------------------------
...............................................................................................................................................TTGGCCGGCGTGATCTCAG........................................................................................1911.001.00----------------------------------------------------1.00----------------------------------------------------------------
...........................................................................................................GGCGGAGCTGGGGTGCT..............................................................................................................................171.000.00------------------------------------------1.00--------------------------------------------------------------------------
.........................................................CGGGACAGTGCCAGTGGG...............................................................................................................................................................................1811.001.00--------1.00------------------------------------------------------------------------------------------------------------
..........................................................................................................................................AGGACTTGGCCGGCGTGATCTCAG........................................................................................2411.001.00----------------------------1.00----------------------------------------------------------------------------------------
............................................................................................................................................................................CCTGCGGTGCTGGGAGCC............................................................1811.001.00---------------------1.00-----------------------------------------------------------------------------------------------
.......................................................................................................GAAGGGCGGAGCTGGGGTGAG..............................................................................................................................2111.001.00-----------------------------------------------------------------------------------1.00---------------------------------
.........GTACGCTGGCTGCAGGAGA..............................................................................................................................................................................................................................1911.001.00------------------------1.00--------------------------------------------------------------------------------------------
.........................................................................................CAGGGCAGGGAAGGGAAGGGCT...........................................................................................................................................2211.005.001.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................GACTTGGCCGGCGTGATCTCAGCTC.....................................................................................2511.001.00--------------------------------------------------------------------------------1.00------------------------------------
.....................................................................................................................GGGTGAGGGTCCAAGGGG...................................................................................................................1811.001.00---------------------------------------1.00-----------------------------------------------------------------------------
..................................................................................................GAAGGGAAGGGCGGAGGC......................................................................................................................................181.000.00---------1.00-----------------------------------------------------------------------------------------------------------
...............................................................................TGGGGCGGGGCAGGGCAGGGAGATT..................................................................................................................................................251.000.00----------------1.00----------------------------------------------------------------------------------------------------
............................................................................GTGTGGGGCGGGGCAGGGCA..........................................................................................................................................................2011.001.00---------------------------------------------------------1.00-----------------------------------------------------------
...................................................................................................................................GGGGCCCAGGACTTGGCCGGC..................................................................................................2111.001.00-----1.00---------------------------------------------------------------------------------------------------------------
..............................................................................................CAGGGAAGGGAAGGGCGA..........................................................................................................................................1811.001.00--1.00------------------------------------------------------------------------------------------------------------------
................................................................................................GGGAAGGGAAGGGCGGAGC.......................................................................................................................................1911.001.00--------1.00------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TACGGCTGCGCTGTCAAGT.......................1911.001.00--------------------------------1.00------------------------------------------------------------------------------------
.........GTACGCTGGCTGCAGGAGAG.............................................................................................................................................................................................................................2011.001.00--------------------------------------1.00------------------------------------------------------------------------------
.........................................................................................CAGGGCAGGGAAGGGAAGGG.............................................................................................................................................2070.860.86--0.14-------------------------------0.14--------------------------------------------------------------0.14-------------0.140.140.14---
..............................................................................GTGGGGCGGGGCAGGGCAGGG.......................................................................................................................................................2140.750.75----------0.50-------------------------------------------------------------------------------------------------0.25--------
....................................................................................CGGGGCAGGGCAGGGAAG....................................................................................................................................................1830.670.67-----------0.33-----------------------------------------------------------------------------------0.33---------------------
.........................................................................................CAGGGCAGGGAAGGGAAGG..............................................................................................................................................1970.570.57----0.14-----------------------------0.14---------------------------------------------------------------0.14-----------0.14------
...............................................................................................................................................................CAGCTCTGCAGACCCTGC.........................................................................1820.500.50-------------------------------------------------------------------------------------------------0.50-------------------
....................................................................................................AGGGAAGGGCGGAGCTGG....................................................................................................................................1820.500.50----------------0.50----------------------------------------------------------------------------------------------------
..........................................................GGGACAGTGCCAGTGGG...............................................................................................................................................................................1740.500.50----------------------------------------------------------------------------------------------------------0.250.25---------
.............................................................................TGTGGGGCGGGGCAGGGC...........................................................................................................................................................1820.500.50---------------------------------------------------------------------------------------------------0.50-----------------
....................................................................................CGGGGCAGGGCAGGGAAGGGA.................................................................................................................................................2130.330.33---------------------------------------------------------------------------------------------------------0.33-----------
...........................................................GGACAGTGCCAGTGGG...............................................................................................................................................................................1690.330.33------------------------------------------------------------------------------------------------------------------0.110.110.11
.........................................................CGGGACAGTGCCAGT..................................................................................................................................................................................1530.330.33------------------------------------------------------------------------------------------------0.33--------------------
.........................................................................................CAGGGCAGGGAAGGGAAGGGTA...........................................................................................................................................2270.290.86-----------------0.14--------------0.14------------------------------------------------------------------------------------
..............................................................................GTGGGGCGGGGCAGGGCAGG........................................................................................................................................................2040.250.25-----------0.25---------------------------------------------------------------------------------------------------------
..........................................................GGGACAGTGCCAGTGGGGAGT...........................................................................................................................................................................2140.250.50---------------------------------0.25-----------------------------------------------------------------------------------
....................................................................................CGGGGCAGGGCAGGGAATG...................................................................................................................................................1950.200.20-----------0.20---------------------------------------------------------------------------------------------------------
....................................................................................CGGGGCAGGGCAGGGAAAA...................................................................................................................................................1950.200.20-------------------------------------------------------------------------------------------------------------0.20-------
....................................................................................CGGGGCAGGGCAGGGAA.....................................................................................................................................................1750.200.20----------------------------------0.20----------------------------------------------------------------------------------

Antisense strand
GCCGCTGCCGTACGCTGGCTGCAGGAGAGCGTCCGGATTCCCTGCTCTAGGTCGCGGCGGGACAGTGCCAGTGGGCGTGTGGGGCGGGGCAGGGCAGGGAAGGGAAGGGCGGAGCTGGGGTGAGGGTCCAAGGGGCCCAGGACTTGGCCGGCGTGATCTCAGCTCTGCAGACCCTGCGGTGCTGGGAGCCACCATGGAGAGTAGGTGCTACGGCTGCGCTGTCAAGTTCACCCTCTTCAAGAAGGAGGCG
.......................................................................................((((..((((((.........(((((((((((((..((((((...)))))).((......))......)))))))))))))...))))))..))))...................................................................
....................................................................................85................................................................................................183.................................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		TAX577739(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR038862(GSM458545)
MM472. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR191574(GSM715684)
78genomic small RNA (size selected RNA from t. (breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784GSM359197(GSM359197)
hepg2_depl_cip_tap. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040009(GSM532894)
G727T. (cervix)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR029128(GSM416757)
H520. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR038859(GSM458542)
MM386. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		GSM359196(GSM359196)
m3m7G_ip. (cell line)		SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR038861(GSM458544)
MM466. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
.....................................................................................GGGGCAGGGCAGGGAAGGGTCT............................................................................................................................................... 221.000.00-------------------------------------------------------------------------------1.00-------------------------------------
............................................................................................................................................................................CCTGCGGTGCTGGGAGCCACCAAGGA.................................................... 261.000.00---------------------------------------------------------------------1.00-----------------------------------------------
.........................................CTGCTCTAGGTCGCGACGT.............................................................................................................................................................................................. 191.000.00------------1.00--------------------------------------------------------------------------------------------------------
................................................................................................GGGAAGGGAAGGGCGGCCG....................................................................................................................................... 191.000.00-------------1.00-------------------------------------------------------------------------------------------------------
.....................................................................................GGGGCAGGGCAGGGAAGGTCT................................................................................................................................................ 211.000.00-----------------------------------------1.00---------------------------------------------------------------------------
....................................................................................................AGGGAAGGGCGGAGCACGC................................................................................................................................... 191.000.00---------------------------------------------------------------1.00-----------------------------------------------------
.........................................................................................................................................................TGATCTCAGCTCTGCGAC............................................................................... 181.000.00----------------------------------------------------------------------1.00----------------------------------------------
................................................................................................GGGAAGGGAAGGGCGGCCGC...................................................................................................................................... 201.000.00-----------------------------------------------------1.00---------------------------------------------------------------