ID: uc001zig.2_intron_8_0_chr15_34655921_r
GENE: (5)
chr15:34655871-34656263-


(1)
AGO2.ip 		(5)
B-CELL 		(1)
BRAIN 		(2)
BREAST 		(14)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(5)
HEART 		(2)
LIVER 		(2)
OTHER 		(21)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
TCCTGAGGGCACCTGTTCCAACAAGAAGGCTTTGCTTAAGTTCAAACCAGGTGAATAAAATGATAGTGGGTGGTGGGCTGTAGGAAAAAGAAGTTCCAGATTTGGGGAGGGACTCTGAAATAACCCAAGAAGTAGAAGAGGGGGAGGGATGGGAGAGGAAGGGAGACCAGGAACCTCCTAGCTAATGCTGTCAAGTCGAGGAGTCAGAGAGAAAATTATCAATGAGTGGAACAAAACCATATCTCATTTGAGAACTGTCCCAGACTGCCATACCTCATGCCCTCTAGCTACTTCTGTGTACTAACCTCTGCCTTGTGGGGGTGGGGGTGGAAATGGGATTTAGGAGCCTTCATCGCAGGGGTGCCTGTGCAGCCTGTCCTCATCCGCTACCCC
.................................................................................................................................................................................................................................................((((....))))...((((((.....((((.((((((.(((....((.......((......))....)).....))).))))))))))...))))))......................................................
.................................................................................................................................................................................................................................................242..................................................................................................343................................................
SizePerfect hitTotal NormPerfect NormSRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR029128(GSM416757)
H520. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATGGGATA.....................................................247.000.00-----2.00-----2.001.00---------------------1.00-----1.00-----------------
..........................................................................................................................................................................................................................................................................................................................GTGGGGGTGGGGGTGGAAATGGGA.......................................................2415.005.00------------1.00---1.00------1.00--1.00---------------------------1.00---
.............................................................................................................................................................................................................................................................................................................................GGGGTGGGGGTGGAAATGGGATA.....................................................233.000.00-------------------------------------1.00-----1.00-----1.00--------
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATGGGAA......................................................2313.002.00---------2.00------------------1.00-----------------------------
....GAGGGCACCTGTTCCAACAAGAAGGCTT.........................................................................................................................................................................................................................................................................................................................................................................2812.002.00----------2.00-----------------------------------------------
...........................................................................................................................................................................................................................................................................................................................TGGGGGTGGGGGTGGAAATGGGA.......................................................2312.002.00------1.00-------------------------------1.00-------------------
....GAGGGCACCTGTTCCAACAAGAAGGCT..........................................................................................................................................................................................................................................................................................................................................................................2712.002.00-1.00----------------1.00---------------------------------------
..........................................................................................................................................................................................................................................................................................................................GTGGGGGTGGGGGTGGAAATGGGATTTA...................................................2812.002.00----1.00-1.00---------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................GGGGTGGGGGTGGAAATGGGAA......................................................222.000.00-----1.00-----------------------------------------------1.00----
......................................................................................................................................................................................................................................................TTTGAGAACTGTCCCAGA.................................................................................................................................1812.002.00---2.00------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................GGGGTGGGGGTGGAAATGGGATTT....................................................2412.002.001.00------1.00--------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................TGTGGGGGTGGGGGTGGAAATGGGATTT....................................................2812.002.00------1.00----------1.00----------------------------------------
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATGGGA.......................................................2212.002.00-------1.00-----------------1.00--------------------------------
.......................................................................................................................................................................................................................................................................................................................CTTGTGGGGGTGGGGGTGGAAATGGGATTTA...................................................3112.002.00--2.00-------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATGGGATTTA...................................................2612.002.002.00---------------------------------------------------------
...................................................................................................................................GTAGAAGAGGGGGAGAGG....................................................................................................................................................................................................................................................181.000.00-1.00--------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATGGGATTAA...................................................261.000.00----1.00-----------------------------------------------------
.....................................................................................................................................................................................CTAATGCTGTCAAGTCGAGGAGT.............................................................................................................................................................................................2311.001.00----------------------------------------------1.00-----------
.........................................................................................................................................................................................................................................................................................................................TGTGGGGGTGGGGGTGGAAATGGGATA.....................................................271.000.00---1.00------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATGGGATAA....................................................251.000.00--------------------------------------------1.00-------------
.................................................................................................................................................................................................................................................................TCCCAGACTGCCATACCTCATGCCC...............................................................................................................2511.001.00------------------------------------1.00---------------------
.................................................................................................................................................................................................................................................................................................ACTTCTGTGTACTAACCTCTG...................................................................................2111.001.00-----------------------------------------------1.00----------
...TGAGGGCACCTGTTCCAACAAGAA..............................................................................................................................................................................................................................................................................................................................................................................2411.001.00-1.00--------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATGGGATTTAG..................................................2711.001.00--------1.00-------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................TCGCAGGGGTGCCTGTGGCA.....................201.000.00--------------------------------1.00-------------------------
...........................................................................................................................................................................................................................................................................................................................TGGGGGTGGGGGTGGAAATGGGATA.....................................................2511.001.00-----------------------------------------1.00----------------
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATGGGATTT....................................................2511.001.00-----------------------------1.00----------------------------
...TGAGGGCACCTGTTCCAACAAGAAGGCT..........................................................................................................................................................................................................................................................................................................................................................................2811.001.00---------------------------------------------1.00------------
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATGGGATTA....................................................251.000.00---------------------------------------1.00------------------
...........................................................................................................................................................................................................................................................................................................................TGGGGGTGGGGGTGGAAATGGGAT......................................................2411.001.00--1.00-------------------------------------------------------
..........................................................................................................................................................GAGGAAGGGAGACCAGGAAC...........................................................................................................................................................................................................................2011.001.00-------------------------------1.00--------------------------
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATG..........................................................1911.001.00-------------1.00--------------------------------------------
...............................................................................................................................................................................................................................................................................................................................GGTGGGGGTGGAAATGGGATTTAG..................................................2411.001.00------------------------------------------------1.00---------
...............................................................................GTAGGAAAAAGAAGTTCCA.......................................................................................................................................................................................................................................................................................................1911.001.00---------------------------------------------------1.00------
.............................................................................................................................................................................................................................................................................................................................GGGGTGGGGGTGGAAATGGGATTTA...................................................2511.001.00-1.00--------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATGG.........................................................2011.001.00----1.00-----------------------------------------------------
..........................................................................................................................................AGGGGGAGGGATGGGTAG.............................................................................................................................................................................................................................................181.000.00---------------1.00------------------------------------------
..........................................................................................................................ACCCAAGAAGTAGAAGGC.............................................................................................................................................................................................................................................................181.000.00---------------------------------1.00------------------------
..........................................................................................................................................................................................................................................................................................................................GTGGGGGTGGGGGTGGAAATGGGATTT....................................................2711.001.00--------------1.00-------------------------------------------
.....................................................................................................................................................................................................................AATTATCAATGAGTGGAACAAAACC...........................................................................................................................................................2511.001.00------------------------1.00---------------------------------
..........................................................................................................................................................................................................................................................................................................................GTGGGGGTGGGGGTGGAAATGGAA.......................................................241.000.00--------------------1.00-------------------------------------
............................................................................................................................................................................................................................................................................................................................GGGGGTGGGGGTGGAAATGGGATTTT...................................................2611.001.001.00---------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................CTTGTGGGGGTGGGGGTGGAAATGGG........................................................2611.001.00------------------------------1.00---------------------------
..........ACCTGTTCCAACAAGAAGGCTTTGCTTA...................................................................................................................................................................................................................................................................................................................................................................2811.001.00----------------------1.00-----------------------------------
...........................................................................................................................................................................................................................................................GAACTGTCCCAGACTGCCATACCTCATGC.................................................................................................................2911.001.00-------------------1.00--------------------------------------
.......................................................................................................................................AAGAGGGGGAGGGATGTCG...............................................................................................................................................................................................................................................191.000.00---------------------1.00------------------------------------
..............................................................................................................................................................................CTCCTAGCTAATGCTGTCAAGTCGAGGA...............................................................................................................................................................................................2811.001.00------------------------------------------1.00---------------
...............................................................................................................................................................................................CAAGTCGAGGAGTCAGAGAGAAAATT................................................................................................................................................................................2611.001.00--------1.00-------------------------------------------------
.............................................................................................................................................................................................................................................................................................AGCTACTTCTGTGTACT...........................................................................................1720.500.50-------------0.50--------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................TGGAAATGGGATTTAG..................................................1640.250.25-------------------------------------------------------0.25--
.........CACCTGTTCCAACAA.................................................................................................................................................................................................................................................................................................................................................................................1580.120.12--------------------------------------------------------0.12-
..................................................................................................................................................GGATGGGAGAGGAAGGG......................................................................................................................................................................................................................................1790.110.11---------------------------------------------------------0.11

Antisense strand
TCCTGAGGGCACCTGTTCCAACAAGAAGGCTTTGCTTAAGTTCAAACCAGGTGAATAAAATGATAGTGGGTGGTGGGCTGTAGGAAAAAGAAGTTCCAGATTTGGGGAGGGACTCTGAAATAACCCAAGAAGTAGAAGAGGGGGAGGGATGGGAGAGGAAGGGAGACCAGGAACCTCCTAGCTAATGCTGTCAAGTCGAGGAGTCAGAGAGAAAATTATCAATGAGTGGAACAAAACCATATCTCATTTGAGAACTGTCCCAGACTGCCATACCTCATGCCCTCTAGCTACTTCTGTGTACTAACCTCTGCCTTGTGGGGGTGGGGGTGGAAATGGGATTTAGGAGCCTTCATCGCAGGGGTGCCTGTGCAGCCTGTCCTCATCCGCTACCCC
.................................................................................................................................................................................................................................................((((....))))...((((((.....((((.((((((.(((....((.......((......))....)).....))).))))))))))...))))))......................................................
.................................................................................................................................................................................................................................................242..................................................................................................343................................................
SizePerfect hitTotal NormPerfect NormSRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR029128(GSM416757)
H520. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR038860(GSM458543)
MM426. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
...................................................................GGGTGGTGGGCTGTAGGGC................................................................................................................................................................................................................................................................................................................... 191.000.00----------------------------------------------------1.00-----
......................................................................TGGTGGGCTGTAGGAATC................................................................................................................................................................................................................................................................................................................. 181.000.00--------------------------------------------------1.00-------
................................................................................................................................................................................................................................AGTGGAACAAAACCATATTTT.................................................................................................................................................... 211.000.00-----------------------------------1.00----------------------
...........................................................................................................................................................................................................................................................................................................................................................................CCTGTGCAGCCTGTCCAATT.......... 201.000.00---------------------------1.00------------------------------