ID: uc001zbj.85
GENE: HERC2(7)
chr15:28518101-28518350-


(2)
AGO2.ip
(1)
AGO3.ip
(14)
B-CELL
(12)
BRAIN
(26)
BREAST
(31)
CELL-LINE
(2)
CERVIX
(3)
HEART
(1)
KIDNEY
(15)
LIVER
(1)
OTHER
(45)
SKIN
(1)
TESTES
(4)
UTERUS

Sense strand
ATAAAATATAGTTGTGTAAGCTAATTGTACACTTATAATCTCTGAATAAATTTGAGTAGCAAGTATCAGAAACTTGATCCTAAATATTAAAAATACATCCTTCCTTTGGAGGGAGCGTGTAGTAAATGTGTTAGTGTGATTGTAAGCATGCTGTCTTTCTGGAGGTTGCTTTGTTCCTGCATCCACTGCTTTCATTTCAGGGATGTTCACGGAACGCCAGCCACCAAAGGGCCAGGAAGCATCCCCCTGC
.........................................................................................................................................((.((.(((((.....(((....)))((.(((.........))).))..))))).))..))....................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR191441(GSM715551)
106genomic small RNA (size selected RNA from . (breast)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR343335SRR029130(GSM416759)
DLD2. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR343336SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
SRR191507(GSM715617)
148genomic small RNA (size selected RNA from . (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343337SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAGT.....................................................................................231582.00212.00110.0020.0016.0019.0013.0014.007.0013.0010.0010.0012.0010.004.0011.0011.007.0011.008.002.007.0010.002.00-7.003.006.004.002.002.005.003.007.00-7.006.007.003.006.004.002.003.007.008.002.00-1.003.005.006.006.005.006.001.005.00--3.004.001.001.003.005.00-3.004.00-1.004.002.006.002.001.003.004.004.003.004.002.003.002.002.00-2.00-3.004.003.002.002.002.00----1.001.002.002.003.00--1.00-2.002.001.002.00-1.002.001.001.00----1.001.00-2.00--1.001.001.00----1.00-1.00----1.00-1.001.00------1.00--1.00---1.00-1.00---
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAG......................................................................................221212.00212.0046.006.006.005.005.002.0011.002.008.008.004.002.001.002.001.002.001.002.00-4.003.00-6.001.005.001.002.002.001.00-1.001.00-1.001.002.001.002.001.00-1.002.001.001.00---2.003.00---3.002.00---2.00-2.004.002.001.00-2.002.001.001.001.00-1.002.00---1.00-2.002.00-2.002.00-3.00--1.001.00---1.00--1.002.00--------------------1.00-2.00--1.00-----1.00-----------------1.00-1.00---1.00----1.00--
...............................................................................................................................................AAGCATGCTGTCTTTCTGGAGT.....................................................................................221145.0025.0032.001.003.001.005.001.002.002.001.001.001.003.008.002.00--1.002.00-----2.00-1.002.001.003.004.001.00---1.00-5.00-1.003.003.00--5.00--2.00--1.003.001.001.00---1.00-3.00------2.004.001.002.00--2.001.00-1.00----1.00-3.001.001.00----2.00----2.00--1.001.00--1.00----1.00--1.00--1.00--------1.00----1.00--1.00-----1.00---------1.00---1.00----------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAGA.....................................................................................231109.00212.004.007.005.004.00-5.003.002.003.002.002.002.002.002.005.002.001.001.00-----1.004.002.00-1.00-1.005.003.00--2.001.00-2.002.00---1.00---4.002.00--------2.001.00-4.00----------2.00-1.00---1.001.00-1.00-------1.00---2.00-1.00-----2.00-1.00-----------1.00-2.00-------------------1.00----1.00-1.00----------------
..............................................................................................................................................TAAGCATGCTGTCTTTCT..........................................................................................18252.0052.00------------1.00-----6.50--7.006.00----3.00----5.50-----------3.003.50--------6.001.00------2.501.50--------------------------2.00---------0.50-------------1.00-------------------------------------1.00----0.500.50
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGA.......................................................................................21129.0029.001.001.001.00--1.001.00--1.00-1.001.00--1.001.001.00-1.00---2.00-2.002.00----1.00-1.001.001.00---2.001.001.00--------------1.00------------------------------------------------------------1.00---------------1.00-------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGAG......................................................................................21125.0025.001.00-1.00-3.00--1.00--1.00-1.001.00--------1.001.001.00-1.001.001.001.00------2.00--2.00------------1.00--2.00--------------------------1.00-------------------------------1.00--------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGG........................................................................................20118.0018.00-1.00---1.00----1.00----1.00-1.00--1.001.00-----2.00-----2.00---1.00-------1.00----------------1.00--------------------------1.00----------1.00------2.00---------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTC...........................................................................................17214.0014.00------------------3.00-------------3.50-----------5.00----------2.50-------------------------------------------------------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGAGA.....................................................................................22112.0025.00----2.00------1.00---1.00---1.00---------1.00--------2.00-------------2.00-------------------------------1.00---------1.00----------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAAA.....................................................................................2318.0029.001.00--1.00---1.00---1.00---1.00---------1.00---------------------------------------1.00------------------------1.00--------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTG.........................................................................................1917.007.00---------------------1.00---------------------------------1.00------1.00---------------------------------------2.00---------2.00----------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAA......................................................................................2216.0029.00--1.001.00---------------------------------------------1.00--------1.00-----------------------1.00------1.00---------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGATT.....................................................................................2315.0029.002.00----1.00--------------------1.00-------------1.00----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAT......................................................................................2214.0029.00----1.00-------------------------1.00--------------1.00----------------------------------------------------------------1.00------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAGTT....................................................................................2414.00212.002.00-------------------------------------------------------------1.00--1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGA.......................................................................................2014.004.00---------------------1.00------1.00---------1.00------------------------------------------------------------1.00-----------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCT..........................................................................................1723.503.50--------------------------------2.50-----------0.50----------0.50-------------------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGTAG......................................................................................2213.007.002.00-------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAGC.....................................................................................2313.00212.001.00------------------1.00--------------------------------------1.00----------------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTAT..........................................................................................183.000.00----------------------1.00----------------------1.00--------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TCCACTGCTTTCATTTCAG..................................................1913.003.00--------------------------------------------------------------------------------------------3.00------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAGAA....................................................................................2413.00212.00--1.00---------------------------1.00--------------------------------------------------------------------------------------------------------------1.00-----------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGAGTAA...................................................................................2412.0025.00------------------2.00--------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGCGT.....................................................................................2212.001.00---1.00------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGATA.....................................................................................2312.0029.00----------------------------2.00----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGAGTT....................................................................................2312.0025.00---------------------1.00------1.00----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGT.......................................................................................2112.0018.00-------1.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAAGGGCCAGGAAGCATCCCCCTG.2412.002.00---------------------------------------------------------------2.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAGTTA...................................................................................2512.00212.001.00-------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGTAGC.....................................................................................2311.007.00----------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGAGTCT...................................................................................2411.0025.00-------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGAA......................................................................................2111.004.00---------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................CTGGAGGTTGCTTTGTCTCT........................................................................201.000.00-----------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
......................................................................................................................................TGTGATTGTAAGCATGCTG.................................................................................................1911.001.00-----------------------------------------------------------------------------------------------------------------------------------------------1.00---------------
........................................................................................................................................TGATTGTAAGCATGCTGTCTTT............................................................................................2211.001.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................AGGGCCAGGAAGCATCCCC....1911.001.00------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
........................................................................................................TTTGGAGGGAGCGTGGTTC...............................................................................................................................191.000.00------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGAGTA....................................................................................2311.0025.00--------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGTAGT.....................................................................................2311.007.00---------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGTATA.....................................................................................2311.007.00-----------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGTT......................................................................................2211.0018.00-----------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTGGAG.........................................................................................191.000.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................GTAAGCATGCTGTCTTTCT..........................................................................................1911.001.00--------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTCTT..........................................................................................181.000.00------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAGAT....................................................................................2411.00212.00-------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGAGG.....................................................................................2211.001.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGAGTAAA..................................................................................2511.0025.00---------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGCG......................................................................................2211.0018.00---------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
...............................................................................................................................GTGTTAGTGTGATTGTAAGC.......................................................................................................2011.001.00------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGTGT.....................................................................................2311.0018.00----------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTG.........................................................................................1811.001.00---------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGGAGTA....................................................................................2411.00212.00-------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTGT........................................................................................2011.007.00----------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGG........................................................................................1911.001.00---------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AAGCATGCTGTCTTTCTGGAGTTT...................................................................................2411.0025.00---------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................TAAGCATGCTGTCTTTCTTGAG......................................................................................2220.5052.00----------------------------------------------------------------------0.50----------------------------------------------------------------------------------------
....................................................................................................................................................TGCTGTCTTTCTGGAG......................................................................................1670.140.14------------------------------------------------------------------------------------0.14--------------------------------------------------------------------------

Antisense strand
ATAAAATATAGTTGTGTAAGCTAATTGTACACTTATAATCTCTGAATAAATTTGAGTAGCAAGTATCAGAAACTTGATCCTAAATATTAAAAATACATCCTTCCTTTGGAGGGAGCGTGTAGTAAATGTGTTAGTGTGATTGTAAGCATGCTGTCTTTCTGGAGGTTGCTTTGTTCCTGCATCCACTGCTTTCATTTCAGGGATGTTCACGGAACGCCAGCCACCAAAGGGCCAGGAAGCATCCCCCTGC
.........................................................................................................................................((.((.(((((.....(((....)))((.(((.........))).))..))))).))..))....................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR343334SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR191441(GSM715551)
106genomic small RNA (size selected RNA from . (breast)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR343335SRR029130(GSM416759)
DLD2. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577588(Rovira)
total RNA. (breast)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR343336SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)
SRR191507(GSM715617)
148genomic small RNA (size selected RNA from . (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR038853(GSM458536)
MELB. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191563(GSM715673)
83genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343337SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
.....................................................................................................................TGTAGTAAATGTGTTAATG.................................................................................................................. 192.000.00----------------------------------------------------------------------------------------------------------------------------------1.00-----------------------1.00----
.....................................................................................................................................................ACCTCCAGAAAGACAGC.................................................................................... 1720.500.50---------------0.50-----------------------------------------------------------------------------------------------------------------------------------------------