ID: uc001zax.2_intron_4_0_chr15_26108350_r.3p
GENE: (1)
chr15:26108300-26108549-


(3)
AGO2.ip
(7)
B-CELL
(2)
BRAIN
(14)
BREAST
(25)
CELL-LINE
(19)
CERVIX
(2)
FIBROBLAST
(3)
HEART
(1)
HELA
(8)
LIVER
(2)
OTHER
(29)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
GTGGCCACCGCGGCGGAAACGACCCGGGCCGGGGGCGGGCGGCGAGGACAAGGGGGCTCTGTGCGGCACCCGCCCAGCTTGCGCCCTGGGGACTGCGGCCGGGCGGCGGGGCTGGACGGGAGTGGACGGGGCTGGGCGCGGGCTGGGCGCGCTGGGCCGGCCAGGCGGCGCGCTGACCGCGGTCTCCGTGCGTCCCGCAGGCGGGGAGCTCGCACCGCCGCGCCCGGGCCGCGAGTGATGATAACCTAAG
............................................................................................((((..(((..((((...))))..)))..)))).....(((.(((....))).)))......................................................................................................
..........................................................................................91.........................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040032(GSM532917)
G603N. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
GSM532876(GSM532876)
G547T. (cervix)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
TAX577589(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040041(GSM532926)
G612T. (cervix)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR040019(GSM532904)
G701T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR040037(GSM532922)
G243T. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM532874(GSM532874)
G699T. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038859(GSM458542)
MM386. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR040006(GSM532891)
G601N. (cervix)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM532885(GSM532885)
G850N. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040027(GSM532912)
G220T. (cervix)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577741(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577740(Rovira)
total RNA. (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM532884(GSM532884)
G871T. (cervix)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577453(Rovira)
total RNA. (breast)
GSM532887(GSM532887)
G761N. (cervix)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
...............................................................................................................................GGGGCTGGGCGCGGGCCGC........................................................................................................195.000.00----2.00--1.00-----------------------1.00-------------------------------------------------1.00----------------------------------
...............................................................................................................................................................................................................GCTCGCACCGCCGCGG...........................164.000.00---2.00-------------------------------------1.00------------------------------------------------1.00-------------------------
.....................................................................................................................................................................................................................ACCGCCGCGCCCGGGT.....................164.000.00--4.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................GGGGCTGGGCGCGGGCC..........................................................................................................173.000.00-----------------------1.00---1.00------------------1.00---------------------------------------------------------------------
..............................................................................................................................CGGGGCTGGGCGCGGGCC..........................................................................................................1852.600.80----0.20--0.20--------------------0.20--0.200.200.200.20---------------------------------------------------------------0.200.200.40-------0.200.20------
...............................................................................................CGGCCGGGCGGCGGGGCGGG.......................................................................................................................................202.000.00----------------1.00-----------------------------------------------------------------1.00---------------------------------
.............................................................................................................................ACGGGGCTGGGCGCGCGCC..........................................................................................................192.000.00--------------------------------------------1.00----------------------------------------1.00------------------------------
.............................................................................................................................ACGGGGCTGGGCGCGCG............................................................................................................172.000.00----------1.00------1.00--------------------------------------------------------------------------------------------------
..................................GCGGGCGGCGAGGACGGA......................................................................................................................................................................................................182.000.00-----------------------------------1.00-------------------------------------1.00------------------------------------------
.......................................................................................................................................................CTGGGCCGGCCAGGCCTGG................................................................................192.000.00---------------------2.00----------------------------------------------------------------------------------------------
..............................................................................................GCGGCCGGGCGGCGGGGCGGGG......................................................................................................................................221.000.00---------------------------------1.00----------------------------------------------------------------------------------
...............................................................................................CGGCCGGGCGGCGGGGGGGA.......................................................................................................................................201.000.001.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................TGGACGGGAGTGGACGGGGC......................................................................................................................2011.001.00-------------------------------------------------------------------------------1.00------------------------------------
...............................................................................................................................GGGGCTGGGCGCGGGCCGT........................................................................................................191.000.00------------------------------------------1.00-------------------------------------------------------------------------
.......................................................................................................................................................................................................................CGCCGCGCCCGGGCCTTCC................191.000.00--------------------------------1.00-----------------------------------------------------------------------------------
..........................................................................................................................TGGACGGGGCTGGGCGCGGGCT..........................................................................................................2211.001.00------1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................ACGGGGCTGGGCGCGCC............................................................................................................171.000.00----------1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................CGGGGCTGGGCGCGGGAGA.........................................................................................................191.000.00--------------1.00-----------------------------------------------------------------------------------------------------
...............................................................................................................................GGGGCTGGGCGCGGGCCGG........................................................................................................191.000.00-------1.00------------------------------------------------------------------------------------------------------------
..........................................................................................................CGGGGCTGGACGGGAGTGGACGGG........................................................................................................................2411.001.00----------------------------------------------------1.00---------------------------------------------------------------
......................................................................................................................GGAGTGGACGGGGCTGGGCGCG..............................................................................................................2211.001.00---------------------------------------------------------------------------------------1.00----------------------------
..............................................................................................................................CGGGGCTGGGCGCGGGTC..........................................................................................................181.000.00----1.00---------------------------------------------------------------------------------------------------------------
.......................................CGGCGAGGACAAGGGGGC.................................................................................................................................................................................................1811.001.00-------------------------1.00------------------------------------------------------------------------------------------
...............................................................................................................................GGGGCTGGGCGCGGGCA..........................................................................................................171.000.00----------------------------1.00---------------------------------------------------------------------------------------
................................................................................................................................GGGCTGGGCGCGGGCTGCG.......................................................................................................191.000.00-1.00------------------------------------------------------------------------------------------------------------------
...............................................................................................................................GGGGCTGGGCGCGGGCCG.........................................................................................................181.000.00-------1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................CGGGAGTGGACGGGGCTGGGCA................................................................................................................221.000.00------1.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................................................GCTGGGCCGGCCAGGCGGG.................................................................................191.000.00------------------------------------------------------------------1.00-------------------------------------------------
................................................................................................................TGGACGGGAGTGGACGGGGCTG....................................................................................................................2211.001.00------------------------------------------------------------------------1.00-------------------------------------------
....................................................................................................................................................................................................................CACCGCCGCGCCCGGGT.....................171.000.00--1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................ACGGGGCTGGGCGCGGGCTGGGTT.....................................................................................................241.000.00------------------------------1.00-------------------------------------------------------------------------------------
...................................................................................................CGGGCGGCGGGGCTGGTCG....................................................................................................................................191.000.00--------------------------------------1.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................................GCTCGCACCGCCGCGGCCC........................191.000.00-----------------------------------------------------------------------1.00--------------------------------------------
.............................................................................................TGCGGCCGGGCGGCGGCGG..........................................................................................................................................191.000.00-------------------------------------1.00------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCTCGCACCGCCGCGGC..........................171.000.00---1.00----------------------------------------------------------------------------------------------------------------
..............................................GACAAGGGGGCTCTGTA...........................................................................................................................................................................................171.000.00---------------------------------------------------------------------------1.00----------------------------------------
......................................................................................................................................................GCTGGGCCGGCCAGGCCAC.................................................................................191.000.00------------------------------------------------------------------------------------1.00-------------------------------
...............................................................................................................................GGGGCTGGGCGCGGGCCTC........................................................................................................191.000.00----1.00---------------------------------------------------------------------------------------------------------------
................................................................................................................................................GGGCGCGCTGGGCCGTC.........................................................................................171.000.00---------1.00----------------------------------------------------------------------------------------------------------
...................................................................................................CGGGCGGCGGGGCTGGT......................................................................................................................................171.000.00--------------------------1.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCTCGCACCGCCGCGGCC.........................181.000.00---------------1.00----------------------------------------------------------------------------------------------------
....................................................................................................................................TGGGCGCGGGCTGGGCGCG...................................................................................................1911.001.00------1.00-------------------------------------------------------------------------------------------------------------
............................................................................................................................GACGGGGCTGGGCGCTGA............................................................................................................181.000.00---------------------------------------1.00----------------------------------------------------------------------------
..............................GGGGGCGGGCGGCGAGCT..........................................................................................................................................................................................................181.000.00------------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................................GAGCTCGCACCGCCGCGC...........................1811.001.00----------1.00---------------------------------------------------------------------------------------------------------
.............................................GGACAAGGGGGCTCTGTG...........................................................................................................................................................................................1811.001.00----------------------------------------------------------1.00---------------------------------------------------------
.......................................................................................GGGGACTGCGGCCGGT...................................................................................................................................................161.000.00----------------------1.00---------------------------------------------------------------------------------------------
..............................................GACAAGGGGGCTCTGTATG.........................................................................................................................................................................................191.000.00-----------------------------------------------------------------------------------------1.00--------------------------
.............................................................................................................GGCTGGACGGGAGTGGCA...........................................................................................................................181.000.00---------------------------1.00----------------------------------------------------------------------------------------
................................................................................................................................................................................CCGCGGTCTCCGTGCGTCCCGCA...................................................2311.001.00----------------------------------------------------------------------------------------------1.00---------------------
..............................................................................................................................CGGGGCTGGGCGCGGGCTGGGCA.....................................................................................................231.000.00--------------------------------------------------------------------1.00-----------------------------------------------
...................................................................................................................................CTGGGCGCGGGCTGGCCT.....................................................................................................181.000.00----------------------------------------------------------------------------------------1.00---------------------------
..............................................................................................................................CGGGGCTGGGCGCGGGAGAA........................................................................................................201.000.00--------------1.00-----------------------------------------------------------------------------------------------------
................................GGGCGGGCGGCGAGGCGG........................................................................................................................................................................................................181.000.00-----------1.00--------------------------------------------------------------------------------------------------------
.........................................................................................................GCGGGGCTGGACGGGAGC...............................................................................................................................181.000.001.00-------------------------------------------------------------------------------------------------------------------
..................................................................................GCCCTGGGGACTGCGGCCGG....................................................................................................................................................2011.001.00-----------------------1.00--------------------------------------------------------------------------------------------
..............................................................................................GCGGCCGGGCGGCGGT............................................................................................................................................161.000.00----------------1.00---------------------------------------------------------------------------------------------------
.............................................................................................................................ACGGGGCTGGGCGCGGGCTG.........................................................................................................2011.001.00------1.00-------------------------------------------------------------------------------------------------------------
....CCACCGCGGCGGAAATCG....................................................................................................................................................................................................................................181.000.001.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................CGGCCGGGCGGCGGGCCCC........................................................................................................................................191.000.00-------------1.00------------------------------------------------------------------------------------------------------
....................................................................................................GGGCGGCGGGGCTGGTG.....................................................................................................................................171.000.00---------1.00----------------------------------------------------------------------------------------------------------
.....................................................................................CTGGGGACTGCGGCCGGG...................................................................................................................................................1811.001.00-------------------------1.00------------------------------------------------------------------------------------------
...................................................................................................CGGGCGGCGGGGCTGGCCGA...................................................................................................................................201.000.00-------------------------------------------------------1.00------------------------------------------------------------
.................................................................................................................................................................................................CCCGCAGGCGGGGAGA.........................................161.000.00----------------------------------------------------------------------------1.00---------------------------------------
............................................AGGACAAGGGGGCTCTGTGC..........................................................................................................................................................................................2011.001.00---1.00----------------------------------------------------------------------------------------------------------------
...................................................................................................CGGGCGGCGGGGCTGGATAC...................................................................................................................................201.000.00------------------------1.00-------------------------------------------------------------------------------------------
.................AACGACCCGGGCCGGGGG.......................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------1.00----------------------------------------------------
................................................................................................................................................................................................................CTCGCACCGCCGCGCC..........................1611.001.00------------------------------------------------------------1.00-------------------------------------------------------
.......................................................................................GGGGACTGCGGCCGGGGG.................................................................................................................................................181.000.00---------1.00----------------------------------------------------------------------------------------------------------
..............................................................................................................................CGGGGCTGGGCGCGGGC...........................................................................................................1750.800.80----------------------------0.40------------------------------------------------------------------------0.20---------0.20----
..............................................................................................................................CGGGGCTGGGCGCGGGCCG.........................................................................................................1950.600.80----------------------------0.40-----------------------------------------------------------------------------------0.20---
..............................................................................................................................CGGGGCTGGGCGCGGGCCGCG.......................................................................................................2150.600.80-------0.20------------------------------------------------------------------------------------------------------0.20--0.20--
.....................................................................................CTGGGGACTGCGGCCGG....................................................................................................................................................1740.500.50-------------------------------------------------------------------------------------------------0.50------------------
...............................................................................................................................GGGGCTGGGCGCGGGCTG.........................................................................................................1820.500.50-------------0.50------------------------------------------------------------------------------------------------------
.............................................................................................................................................GCTGGGCGCGCTGGGCCGG..........................................................................................1920.500.50------------------------------0.50-------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GCCGCGCCCGGGCCGCG.................1720.500.500.50-------------------------------------------------------------------------------------------------------------------
..............................................................................................................................CGGGGCTGGGCGCGGGCCGC........................................................................................................2050.400.80-------------------------------------------------------------------------------------------------0.200.20-----------------
......................................................................................................................GGAGTGGACGGGGCT.....................................................................................................................1540.250.25----------------------------------------------------------------------------------------------------------0.25---------
..............................GGGGGCGGGCGGCGAGG...........................................................................................................................................................................................................1740.250.25-----------------------------------------------------------------------------------------------------------0.25--------
..............................................................................................................................CGGGGCTGGGCGCGGGCGAA........................................................................................................2050.200.80--------------0.20-----------------------------------------------------------------------------------------------------
..............................................................................................................................CGGGGCTGGGCGCGGGCGGGC.......................................................................................................2150.200.80---------------------------------------------------------------------------------------------------0.20----------------
..........................................................................................................CGGGGCTGGACGGGA.................................................................................................................................1560.170.17-----------------------------------------------------------------------------------------------------0.17--------------
.....................................................................................................................GGGAGTGGACGGGGC......................................................................................................................1580.120.12-------------------------------------------------------------------------------------------------------------------0.12

Antisense strand
GTGGCCACCGCGGCGGAAACGACCCGGGCCGGGGGCGGGCGGCGAGGACAAGGGGGCTCTGTGCGGCACCCGCCCAGCTTGCGCCCTGGGGACTGCGGCCGGGCGGCGGGGCTGGACGGGAGTGGACGGGGCTGGGCGCGGGCTGGGCGCGCTGGGCCGGCCAGGCGGCGCGCTGACCGCGGTCTCCGTGCGTCCCGCAGGCGGGGAGCTCGCACCGCCGCGCCCGGGCCGCGAGTGATGATAACCTAAG
............................................................................................((((..(((..((((...))))..)))..)))).....(((.(((....))).)))......................................................................................................
..........................................................................................91.........................................................150..................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR189783DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040032(GSM532917)
G603N. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
GSM532876(GSM532876)
G547T. (cervix)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
TAX577589(Rovira)
total RNA. (breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040041(GSM532926)
G612T. (cervix)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR040019(GSM532904)
G701T. (cervix)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR040037(GSM532922)
G243T. (cervix)
SRR040028(GSM532913)
G026N. (cervix)
SRR040011(GSM532896)
G529T. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM532874(GSM532874)
G699T. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040014(GSM532899)
G623N. (cervix)
SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR038859(GSM458542)
MM386. (cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR040006(GSM532891)
G601N. (cervix)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR038853(GSM458536)
MELB. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM532885(GSM532885)
G850N. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040027(GSM532912)
G220T. (cervix)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577741(Rovira)
total RNA. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577740(Rovira)
total RNA. (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM532884(GSM532884)
G871T. (cervix)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577453(Rovira)
total RNA. (breast)
GSM532887(GSM532887)
G761N. (cervix)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
............................TCGCCGCCCGCCCCCGG............................................................................................................................................................................................................. 17118.0018.0011.006.00---------------------------------------------------------------------------------1.00--------------------------------
......................................................................................................................GGAGTGGACGGGGCTGCCA................................................................................................................. 19415.000.00-----3.00-----2.003.00------2.00------------------------------1.001.00----------------------1.00------------------1.00-1.00--------------------
......................................................................................................................GGAGTGGACGGGGCTGCCC................................................................................................................. 1944.000.00-----1.00---------------------------------------1.00---1.00--------------------1.00---------------------------------------------
............................CCGGGGGCGGGCGGCGTG............................................................................................................................................................................................................ 184.000.00----------------------1.00-1.00-1.00--------------------------------------------------1.00--------------------------------------
............................CCGGGGGCGGGCGGCGT............................................................................................................................................................................................................. 174.000.00----------------------------------------1.00------1.00--------1.00-----------------------1.00-----------------------------------
............................CCGGGGGCGGGCGGCTA............................................................................................................................................................................................................. 173.000.00--------3.00-----------------------------------------------------------------------------------------------------------
............................CCGGGGGCGGGCGGCGTGG........................................................................................................................................................................................................... 192.000.00------------------2.00-------------------------------------------------------------------------------------------------
...........................GCCGGGGGCGGGCGGCGGCG........................................................................................................................................................................................................... 202.000.001.001.00------------------------------------------------------------------------------------------------------------------
............................CCGGGGGCGGGCGGCGAA............................................................................................................................................................................................................ 182.000.001.001.00------------------------------------------------------------------------------------------------------------------
..............CGGCCCGGGTCGTTTCC........................................................................................................................................................................................................................... 1712.002.00-------------------------------------------1.00-------------------------1.00----------------------------------------------
............................CCGGGGGCGGGCGGCGTGGT.......................................................................................................................................................................................................... 202.000.00--------------------2.00-----------------------------------------------------------------------------------------------
............................CCGGGGGCGGGCGGCTG............................................................................................................................................................................................................. 172.000.00-----------------1.00------------------------------------1.00-------------------------------------------------------------
..............GGCCCGGGTCGTTTCC............................................................................................................................................................................................................................ 1612.002.00---------------------------------------------------------1.00----1.00-----------------------------------------------------
.............................TCGCCGCCCGCCCCCG............................................................................................................................................................................................................. 1631.331.33-0.67---------------------------0.33--------------------------------------------------------------------------0.33-----------
.............................CGCCGCCCGCCCCCG.............................................................................................................................................................................................................. 1501.001.00-------------------------------------------------------------------1.00------------------------------------------------
............................CCGGGGGCGGGCGGCGATG........................................................................................................................................................................................................... 191.000.00-----------------------------1.00--------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CCGGGCGCGGCGGTGC....................... 1611.001.00------------------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................CGGGACGCACGGAGAC..................................................... 1611.001.00-------------------------------------------------------------1.00------------------------------------------------------
...............................................................................................................GCCCCGTCCACTCCCGTCCAG...................................................................................................................... 2111.001.00-----------------------------------------------------1.00--------------------------------------------------------------
....................GACCCGGGCCGGGGGTTCT................................................................................................................................................................................................................... 191.000.00----------------------------------1.00---------------------------------------------------------------------------------
............................CCGGGGGCGGGCGGCTGGC........................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------1.00--------------------------------------------------
............................................................................CCCCAGGGCGCAAGC............................................................................................................................................................... 1511.001.00--------------------------------------------------------------------------------------------1.00-----------------------
................................................................GGCACCCGCCCAGCTCG......................................................................................................................................................................... 171.000.00----------------------------------------------------------------1.00---------------------------------------------------
.....................ACCCGGGCCGGGGGCGGGTCG................................................................................................................................................................................................................ 211.000.001.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CCGCCGCGCCCGGGCCGCCA................ 201.000.00-------------1.00------------------------------------------------------------------------------------------------------
............................CCGGGGGCGGGCGGCGTGGC.......................................................................................................................................................................................................... 201.000.00------------------------------------------------------------------------------------------------1.00-------------------
..............GGAAACGACCCGGGCCGC.......................................................................................................................................................................................................................... 181.000.00-------------------------------------------------------------------------------------------1.00------------------------
..............................................................................TTGCGCCCTGGGGACTGG.......................................................................................................................................................... 181.000.00-----------------------------------------------------------1.00--------------------------------------------------------
........................................................................................................................AGTGGACGGGGCTGGGCGTG.............................................................................................................. 201.000.00--------------------------------------------------------------------------------------1.00-----------------------------
.............................................................................................................................................................................................................GAGCTCGCACCGCCGAC............................ 171.000.00---------------1.00----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................GGACGCACGGAGACCGCGGTCAGC....................................................... 2411.001.00---1.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................................GGGAGTGGACGGGGCCCA................................................................................................................... 1881.000.00------------------------------------------------------------------------------1.00-------------------------------------
..............................................................................................................................................................................................................................CACTCGCGGCCCGGG............. 1530.330.33-------------------------------------------------------------------------------------------------------0.33------------
.............................CGGGGGCGGGCGGCGATTT.......................................................................................................................................................................................................... 190.330.00------------------------------------------------------------------------------------------------------0.33-------------
............................................................................................................................................CCCAGCGCGCCCAGCC.............................................................................................. 1630.330.33---------------------------------------------------------------------------------------------------------0.33----------
..............................................................................................CCCCGCCGCCCGGCCGC........................................................................................................................................... 1780.120.12------------------------------------------------------------------------------------------------------------------0.12-