ID: uc001ynf.4
GENE: CKB(3)
chr14:103988238-103988409-


(1)
AGO1.ip OTHER.mut
(5)
AGO2.ip
(6)
B-CELL
(7)
BRAIN
(9)
BREAST
(30)
CELL-LINE
(20)
CERVIX
(8)
HEART
(5)
HELA
(3)
LIVER
(3)
OTHER
(59)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
ACAAGCCCAGCGATGAGCACAAGACCGACCTCAACCCCGACAACCTGCAGGTGCGGGGCTGCGGGCGGGCCGGGCGGGCGGGGCCGGGGTCTTCGGGCGCTCACTCCCGTCTCGCCTCCCAGGGCGGCGACGACCTGGACCCCAACTACGTGCTGAGCTCGCGGGTGCGCAC
..................................................................(((..((((((((((((..((((((....))).)))..))))))).))))))))....................................................
..................................................................67.....................................................122................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM532880(GSM532880)
G659T. (cervix)
SRR189782GSM532874(GSM532874)
G699T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189784GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189787SRR040007(GSM532892)
G601T. (cervix)
SRR189783SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR040029(GSM532914)
G026T. (cervix)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040011(GSM532896)
G529T. (cervix)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189785SRR040031(GSM532916)
G013T. (cervix)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532890(GSM532890)
G576T. (cervix)
GSM339994(GSM339994)
hues6. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040030(GSM532915)
G013N. (cervix)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040019(GSM532904)
G701T. (cervix)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040015(GSM532900)
G623T. (cervix)
.......................................................................GGGCGGGCGGGGCCGGGG...................................................................................18664.1764.177.170.335.33-2.67---0.177.17--0.17---1.330.33---0.171.670.17----2.50-0.17--1.00----1.002.002.332.50-0.170.172.00---1.00----0.330.830.17-0.50-0.330.330.330.331.000.170.170.170.17------1.001.00--1.00-1.00----------0.500.500.670.170.670.170.67-0.50--0.500.500.50--0.50-0.170.330.330.330.33-0.330.330.33-0.33----0.170.170.170.170.170.170.170.170.170.170.170.170.170.170.170.170.17-0.170.170.170.170.170.170.170.170.170.170.170.170.170.17
....................................................................................................TCACTCCCGTCTCGCCTCCCAGT.................................................23117.0010.00-1.00-1.00-1.00-4.00-1.00---2.00------------------1.00----------------1.00---1.00--------------1.00----1.001.00--------------1.00-------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGGTG..................................................................................1912.000.006.00---4.00----------------2.00---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGTG...................................................................................18011.003.001.00-3.00-3.00-----------------1.00-------1.00-------1.00-----------------------1.00----------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGGGT..................................................................................19110.0010.005.00-1.00-2.00-----------1.00-------------------------------1.00------------------------------------------------------------------------------------------------------------
....................................................................................................TCACTCCCGTCTCGCCTCCCAG..................................................22110.0010.00---4.00----------------2.00---2.00----1.00------------------------------------------------1.00------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGTGG..................................................................................1909.003.003.00-3.00-2.00----------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................GGGCGGCGACGACCTGGACC...............................2019.009.00-1.00------2.00---1.00-------------1.00------2.00---------1.00------------1.00----------------------------------------------------------------------------------------------------
........................................................................GGCGGGCGGGGCCGGGGT..................................................................................1828.508.500.50--------0.50-------3.50------------------------1.00-----1.00----------------------------------------------0.50-----0.500.50----0.50-------------------------------------------------
.....................................................................................................CACTCCCGTCTCGCCTCCCAGT.................................................228.000.00---1.00---7.00-----------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................GGCGGGCGGGGCCGGGGAA.................................................................................197.000.00----------------2.001.004.00------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................GCGGGCGGGGCCGGG....................................................................................1506.006.00-------------------2.00---------------2.002.00------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGGTGT.................................................................................205.000.004.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................CGACGACCTGGACCCCAAC..........................1914.004.00--------------2.00-----2.00----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCCAACTACGTGCTGAGCTCG...........2314.004.00---4.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................GCGGGCGGGGCCGGGGAA.................................................................................1803.002.00----------------1.00----------------------1.00-----------------------------------------------1.00---------------------------------------------------------------------
......................................................................................................................................CTGGACCCCAACTACGTGCTGAGCTCGCGGGTGCGC..3613.003.00------3.00------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGG.....................................................................................1603.003.00--------------------------------------------------1.002.00---------------------------------------------------------------------------------------------------------
.........GCGATGAGCACAAGACCGACCTCAACC........................................................................................................................................2713.003.00-------------------------------------3.00-----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................GCGGCGACGACCTGGACC...............................1813.003.00-----1.00------1.00----------------------------------------1.00-------------------------------------------------------------------------------------------------------
.........................................................................GCGGGCGGGGCCGGGGT..................................................................................1723.003.00---------------------1.50-------------------------------------0.50-------------------------------------0.50--------0.50--------------------------------------------------
.................................ACCCCGACAACCTGCAG..........................................................................................................................1713.003.00-3.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
......................GACCGACCTCAACCCCGA....................................................................................................................................1813.003.00-------------3.00-----------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGTGGT.................................................................................2003.003.003.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................ACGTGCTGAGCTCGCGGGTGCGCA.2412.002.00-1.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................GCGGGCGGGGCCGGGGTT.................................................................................1822.003.00------------------1.00---1.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................TACGTGCTGAGCTCGCGGGTGCGC..2412.002.00-2.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................GCGGGCGGGGCCGGGG...................................................................................1602.002.00-------------------1.00---------------------------------------------------------------1.00-------------------------------------------------------------------------
....................................................................................................TCACTCCCGTCTCGCCTCCCAGC.................................................2312.0010.00------------------------1.00--1.00---------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGGGTG.................................................................................2012.0010.001.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
................GCACAAGACCGACCTCAACCC.......................................................................................................................................2112.002.00-----------------------------------------------2.00-------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGTGGG.................................................................................2002.003.002.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................GACCTGGACCCCAACTACGTGCTCAGC..............272.000.00--------2.00----------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................CGGGCGGGGCCGGGG...................................................................................1502.002.00--------------------------------------------------1.00--------------------1.00-------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGGTGG.................................................................................202.000.002.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................GGCGACGACCTGGACCC..............................1712.002.00----------1.001.00-------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCCAACTACGTGCTGAGCTC............2212.002.00---2.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................CTCACTCCCGTCTCGCCTCCCAGT.................................................242.000.00------2.00------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CGTGCTGAGCTCGCGGGTGCGC..2212.002.00------2.00------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................CGGGCGGGCGGGGCCGGGG...................................................................................1912.002.00------1.00------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
..................................................................................................................................................TACGTGCTGAGCTCGCGGGTGC....2212.002.00-2.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................GACGACCTGGACCCCAAC..........................1812.002.00----------------------------------------------------1.00----------1.00---------------------------------------------------------------------------------------------
......................................................................................................................................CTGGACCCCAACTACGTGCT..................2012.002.00-----1.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................GCGGGCGGGGCCGGGGTG.................................................................................1822.003.00------------------------------------------------------------------1.00-----1.00------------------------------------------------------------------------------------
...................................................................................................................................................ACGTGCTGAGCTCGCGGGTGCGAAC2511.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
........................................................GGCTGCGGGCGGGCCGCC..................................................................................................181.000.00--------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
................................................................GCGGGCCGGGCGGGCGTG..........................................................................................181.000.00------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
....................................CCGACAACCTGCAGGTGC......................................................................................................................1811.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGGTA..................................................................................191.000.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................CTCACTCCCGTCTCGCCTCCT....................................................211.000.00---------------------------------------------------------------------1.00---------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGGT...................................................................................181.000.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGCTGT.................................................................................2001.003.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCCAACTACGTGCTGAGCGCG...........231.000.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................GGCGGGCGGGGCCGGGGTG.................................................................................1921.008.50----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
......................................................................CGGGCGGGCGGGGCCGGGGGT.................................................................................2111.002.00------------------------------------------------------1.00------------------------------------------------------------------------------------------------------
...................................................................................................CTCACTCCCGTCTCGCCTCCCTATT................................................251.000.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................GCGGCGACGACCTGGCCC...............................181.000.00------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................ACCTGGACCCCAACTACG......................1811.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGGCGACGACCTGGACCCCAA...........................2311.001.00---------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
.........................................................................................................................GGGCGGCGACGACCTGGAGC...............................201.000.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CGTGCTGAGCTCGCGGGTGCGA..221.000.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGTGTG.................................................................................2001.003.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................GGCGGGCGGGGCCGGGGTGG................................................................................2021.008.50--------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
.......................................................................................................................................TGGACCCCAACTACG......................1511.001.00------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.......CAGCGATGAGCACAAGACCGAC...............................................................................................................................................2211.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................CGGCGACGACCTGGACCC..............................1811.001.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................ACTACGTGCTGAGCTCGCGGGTGCG...2511.001.00--------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
..............................................................................................................................................CAACTACGTGCTGAGCTCGCGG........2211.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.......................ACCGACCTCAACCCCGACAACC...............................................................................................................................2211.001.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGACA...................................................................................181.000.00----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................CGGGCGGGCGGGGCCGGGGG..................................................................................2011.002.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
.................CACAAGACCGACCTCAACCCCGACAACCTG.............................................................................................................................3011.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................CGACGACCTGGACCCCAA...........................1811.001.00-------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................GTCTTCGGGCGCTCACTCCCGTC.............................................................2311.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGACCTGGACCCCAACTACGTGC...................2411.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................ACTCCCGTCTCGCCTCCCAGT.................................................211.000.00--------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
........AGCGATGAGCACAAGACCGACC..............................................................................................................................................2211.001.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCAACTACGTGCTGAGCTCGCGGGTGCGC..2911.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGCGGGCCGGGCGGGTCG...........................................................................................181.000.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................GCTGCGGGCGGGCCGGGCTCCC.............................................................................................221.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
........................................................................GGCGGGCGGGGCCGGGGTT.................................................................................1921.008.501.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................CGGGGCTGCGGGCGGGCCGGGCG................................................................................................2311.001.00------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGGGTA.................................................................................2011.0010.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................ACCTGGACCCCAACTACGTG....................2011.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGGTGTC................................................................................211.000.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
..................ACAAGACCGACCTCAACC........................................................................................................................................1811.001.00-------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.............TGAGCACAAGACCGACCTCAACCCCG.....................................................................................................................................2611.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCACTCCCGTCTCGCCTCCCA...................................................2111.001.00----------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
..................ACAAGACCGACCTCAACCCCG.....................................................................................................................................2111.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................GGGCGGCGACGACCTGGAC................................1911.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.....................AGACCGACCTCAACC........................................................................................................................................1511.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................AGGGCGGCGACGACCTGGATA...............................211.000.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGCCCT.................................................................................2001.003.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CCAACTACGTGCTGAGCTCGCGGGTGCAC..291.000.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GTGCTGAGCTCGCGGGTGC....1911.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
........................CCGACCTCAACCCCGACAACCTGCAGGG........................................................................................................................281.000.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................TCTCGCCTCCCAGGGG...............................................161.000.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
...........GATGAGCACAAGACCGACCTCAACCCCGA....................................................................................................................................2911.001.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCACTCCCGTCTCGCCTCCCCG..................................................221.000.00------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GTGCTGAGCTCGCGGGTGCGCA.2211.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................ACCTGGACCCCAACTACGTGC...................2111.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.......CAGCGATGAGCACAAGACCGACC..............................................................................................................................................2311.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................GGCGGCGACGACCTGGACCCCAACTACGTGC...................3111.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..............GAGCACAAGACCGACCT.............................................................................................................................................1711.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
...............AGCACAAGACCGACCTCAA..........................................................................................................................................1911.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................CTGGACCCCAACTACGTGC...................1911.001.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................GGGCGGCGACGACCTGGACCCCA............................2311.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
............ATGAGCACAAGACCGACCTCAACC........................................................................................................................................2411.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGACCCCAACTACGTGCTGAGCTCGCGGG.......3011.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................GCGGGCGGGGCCGGGGTTGGG..............................................................................2121.003.00------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.........................................AACCTGCAGGTGCGGGGC.................................................................................................................1811.001.00----------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
........................................................................................................................AGGGCGGCGACGACCTGGACCCCAACC.........................271.000.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
..................ACAAGACCGACCTCAACCCC......................................................................................................................................2011.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGTTG..................................................................................1901.003.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------
........................CCGACCTCAACCCCGACAACC...............................................................................................................................2111.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGACCCCAACTACGTGCTG.................2011.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................CACTCCCGTCTCGCCTCCCAGTA................................................231.000.00-----------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
.....................................................................CCGGGCGGGCGGGGCCGGGG...................................................................................2011.001.00----------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
........................................................................GGCGGGCGGGGCCGGG....................................................................................1601.001.00-----------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................ACGTGCTGAGCTCGCGGGTGCG...2211.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................CGGCGACGACCTGGACCCCAACTACGTG....................2811.001.00------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................ACGACCTGGACCCCAACTACGTGCTCAG...............281.000.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................CGGCGACGACCTGGACC...............................1711.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGGTC..................................................................................191.000.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
..AAGCCCAGCGATGAGCACAAGACCGAC...............................................................................................................................................2711.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
....................AAGACCGACCTCAACCCCGAC...................................................................................................................................2111.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................GGCGGGCGGGGCCGG.....................................................................................1501.001.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGCGGT.................................................................................2001.003.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CAACTACGTGCTGAGCTCGCGGGTGCGC..2811.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................CTACGTGCTGAGCTCGCGGGTTCGC..251.000.00--------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGCGC..................................................................................1901.003.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
................GCACAAGACCGACCTCAACAC.......................................................................................................................................211.000.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................GGCGGGCGGGGCCGGTTTA.................................................................................1901.001.00------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
........................................................GGCTGCGGGCGGGCCTGC..................................................................................................181.000.00--------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
........AGCGATGAGCACAAGACCGAC...............................................................................................................................................2111.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................AACTACGTGCTGAGCTCGCGGGTGC....2511.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................TGCTGAGCTCGCGGGTGCGCA.2111.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
................................AACCCCGACAACCTGCAG..........................................................................................................................1811.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
...........GATGAGCACAAGACCGACC..............................................................................................................................................1911.001.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGTGT..................................................................................1901.003.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
................GCACAAGACCGACCTCAACCCCG.....................................................................................................................................2311.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...............................CAACCCCGACAACCTGCAG..........................................................................................................................1911.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................CGGGCGGGCGGGGCCTGGA...................................................................................191.000.00------------------------------------------------------------------------------------------1.00------------------------------------------------------------------
..................ACAAGACCGACCTCAACCCCGACAAC................................................................................................................................2611.001.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
........AGCGATGAGCACAAGACCGACCTCAACC........................................................................................................................................2811.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.......................ACCGACCTCAACCCCGACAACCTGCAG..........................................................................................................................2711.001.00------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
...........................................................................................................................GCGGCGACGACCTGGAC................................1711.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................ACGTGCTGAGCTCGCGGGTTC....211.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................GGCGGGCGGGGCCGGTGT..................................................................................1801.001.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................AGACCGACCTCAACCCCGACAACCTGCAG..........................................................................................................................2911.001.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
........................................................................................................................AGGGCGGCGACGACCTGGACC...............................2111.001.00-------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
............ATGAGCACAAGACCGACCTCAACCCCGA....................................................................................................................................2811.001.00------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
....................AAGACCGACCTCAACCC.......................................................................................................................................1711.001.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCACTCCCGTCTCGCCTCCCAGA.................................................2311.0010.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................GCGACGACCTGGACCCCAACTAC.......................2311.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.......CAGCGATGAGCACAAGACCGACCTCAACC........................................................................................................................................2911.001.00-----------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGCGCG.................................................................................2001.003.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TGGACCCCAACTACGTGCTCAGC..............231.000.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
...................CAAGACCGACCTCAACCCCGACAACCTGCAGGG........................................................................................................................331.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................ACTACGTGCTGAGCTCGCGGGTGCGC..2611.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................CTCACTCCCGTCTCGCCTCCCAGA.................................................241.000.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.............TGAGCACAAGACCGACCTCAACCCC......................................................................................................................................2511.001.00-------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGAAGG..................................................................................191.000.00---------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...................CAAGACCGACCTCAACCC.......................................................................................................................................1811.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
........................CCGACCTCAACCCCGACAACCTGCAG..........................................................................................................................2611.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
...AGCCCAGCGATGAGCACAAGACCG.................................................................................................................................................2411.001.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCACTCCCGTCTCGCCCCAG....................................................201.000.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................GACGACCTGGACCCCAACTACG......................2211.001.00----------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGCAG..................................................................................1901.003.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................GCGGGCGGGGCCGGGGAGC................................................................................1901.002.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................GACCTGGACCCCAACTACGTGC...................2211.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................AGGGCGGCGACGACCTGGAGCCC.............................231.000.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.................CACAAGACCGACCTCAACC........................................................................................................................................1911.001.00--------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.CAAGCCCAGCGATGAGCACAAGACCGACCTC............................................................................................................................................3111.001.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCACTCCCGTCTCGCCTCCCAGCT................................................2411.0010.00------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CGTGCTGAGCTCGCGGGTGCGCAC2411.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................CGACGACCTGGACCCCAACTACGTGCTGAGC..............3111.001.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................TCACTCCCGTCTCGCCTCCCATT.................................................2311.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGGCGGGCGGGGCCGGGGA..................................................................................1960.6764.170.33--------------------0.17-----------------------0.17---------------------------------------------------------------------------------------------------------------
......................................................................CGGGCGGGCGGGGCCGGG....................................................................................1860.670.67------0.17-----0.17-------------------------------------------------------------------------------0.33----------------------------------------------------------------
........AGCGATGAGCACAAGACC..................................................................................................................................................1820.500.50-----0.50-------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................GCGACGACCTGGACC...............................1520.500.50------------------------------------------------------0.50------------------------------------------------------------------------------------------------------
......CCAGCGATGAGCACAAGACC..................................................................................................................................................2020.500.50--------------------------------------------------------0.50----------------------------------------------------------------------------------------------------
..................................................GTGCGGGGCTGCGGGCGG........................................................................................................1820.500.50-------------------------------------------------------0.50-----------------------------------------------------------------------------------------------------
................................................................................................................................GACGACCTGGACCCC.............................1520.500.50--------0.50----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................CGGGGCTGCGGGCGGGC......................................................................................................1740.500.50---------------------------------------------------------------------------------------------0.25---------------------------0.25-----------------------------------
............................................................GCGGGCGGGCCGGGCGGG..............................................................................................1820.500.50---------------------------------------------------------0.50---------------------------------------------------------------------------------------------------
.......CAGCGATGAGCACAAGACC..................................................................................................................................................1920.500.50-----0.50-------------------------------------------------------------------------------------------------------------------------------------------------------
..AAGCCCAGCGATGAGCACAAGAC...................................................................................................................................................2320.500.50---------------------------0.50---------------------------------------------------------------------------------------------------------------------------------
..................................CCCCGACAACCTGCAG..........................................................................................................................1620.500.50-0.50-----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................TGCGGGGCTGCGGGC..........................................................................................................1570.430.43-------------------------------------------------------------------------------------------------------------0.43-----------------------------------------------
..........................................................................CGGGCGGGGCCGGGGTTG................................................................................1850.400.20---------------------------------------------------------------------------------------------------0.40---------------------------------------------------------
.......................................ACAACCTGCAGGTGC......................................................................................................................1530.330.33-----------------------------0.33-------------------------------------------------------------------------------------------------------------------------------
....................................................GCGGGGCTGCGGGCGGGC......................................................................................................1830.330.33-------------------------------------------------------0.33-----------------------------------------------------------------------------------------------------
...................................CCCGACAACCTGCAG..........................................................................................................................1530.330.33-------------------------------------------------------------------------------------------------------------------0.33-----------------------------------------
.............................................................CGGGCGGGCCGGGCGGG..............................................................................................1740.250.25----------------------------------------0.25--------------------------------------------------------------------------------------------------------------------
.....................................................CGGGGCTGCGGGCGGGCAA....................................................................................................1940.250.50------------------------------------------0.25------------------------------------------------------------------------------------------------------------------
..........................................................................CGGGCGGGGCCGGGGT..................................................................................1650.200.20---------------------------------------------------------------------------------------------------0.20---------------------------------------------------------
..........................................................................CGGGCGGGGCCGGGGTGGGG..............................................................................2050.200.20--------------------------------------------------------------------------------------------------------------0.20----------------------------------------------
..........................................................................CGGGCGGGGCCGGGGTTGG...............................................................................1950.200.20--------------------------------------------------------------------------------------------------------------------------0.20----------------------------------
.......................................................................GGGCGGGCGGGGCCGGGGAAGA...............................................................................2260.1764.17-----------------0.17-------------------------------------------------------------------------------------------------------------------------------------------
.................................................................CGGGCCGGGCGGGCGGG..........................................................................................1780.120.12---------0.12---------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
ACAAGCCCAGCGATGAGCACAAGACCGACCTCAACCCCGACAACCTGCAGGTGCGGGGCTGCGGGCGGGCCGGGCGGGCGGGGCCGGGGTCTTCGGGCGCTCACTCCCGTCTCGCCTCCCAGGGCGGCGACGACCTGGACCCCAACTACGTGCTGAGCTCGCGGGTGCGCAC
..................................................................(((..((((((((((((..((((((....))).)))..))))))).))))))))....................................................
..................................................................67.....................................................122................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM532880(GSM532880)
G659T. (cervix)
SRR189782GSM532874(GSM532874)
G699T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR189784GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189787SRR040007(GSM532892)
G601T. (cervix)
SRR189783SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR040029(GSM532914)
G026T. (cervix)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040011(GSM532896)
G529T. (cervix)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR189785SRR040031(GSM532916)
G013T. (cervix)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM532890(GSM532890)
G576T. (cervix)
GSM339994(GSM339994)
hues6. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040030(GSM532915)
G013N. (cervix)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR040019(GSM532904)
G701T. (cervix)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040015(GSM532900)
G623T. (cervix)
................................................................................................GGGAGGCGAGACGGGAGTGAGCGC.................................................... 2412.002.00--------------------------------2.00----------------------------------------------------------------------------------------------------------------------------
.....................AGGTTGTCGGGGTTGAGGTCGGTCT.............................................................................................................................. 2511.001.00----------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
...........................................................................................................................AGTTGGGGTCCAGGTCGTCGCCGC......................... 2411.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
........................................................................GGCGGGCGGGGCCGGGGGGGC............................................................................... 211.000.00--------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
...............................................CAGGTGCGGGGCTGCGGGCAA........................................................................................................ 211.000.00----------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
...............................................................GGCGGGCCGGGCGGGCGT........................................................................................... 181.000.00-------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
.......................................................................ACCCCGGCCCCGCCCGCCC.................................................................................. 1911.001.00-------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
...................................................................GGCCGGGCGGGCGGGGCGGA..................................................................................... 201.000.00----------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
.........................................................................GCGGGCGGGGCCGGGGACCC............................................................................... 2001.000.00------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
......................CAGGTTGTCGGGGTTGAGGTCGGTC............................................................................................................................. 2511.001.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
.......................................................................CCCCGGCCCCGCCCGCCC................................................................................... 1860.670.67----------------------------------------------------------------0.17----------------------------------------------------------0.170.17-----------------0.17--------------
.........TCTTGTGCTCATCGC.................................................................................................................................................... 1530.330.33-----------------------------------------------------------------------------------------------------------------------0.33-------------------------------------
..................................................................CCCCGCCCGCCCGGCCC......................................................................................... 1770.140.14----------------------------------------------0.14--------------------------------------------------------------------------------------------------------------