ID: uc001yfq.2_intron_8_0_chr14_96998987_f.5p
GENE: (9)
chr14:96998937-96999186+


(1)
AGO1.ip 		(1)
AGO2.ip 		(1)
AGO3.ip 		(1)
B-CELL 		(2)
BRAIN 		(1)
BREAST 		(11)
CELL-LINE 		(1)
FIBROBLAST 		(7)
HEART 		(4)
HELA 		(1)
KIDNEY 		(4)
LIVER 		(1)
OTHER 		(9)
SKIN 		(1)
XRN.ip

Sense strand
GCAATAGCATCAACTCTTGTACATAAATTTTTCTTGGTATTTTCTAAATGGTATGTGTTTAGATTATATTAAAATAAAATTGATTGTAGACACTGAAGTTTAGTCTTATTTCTATGACATTTCTCAGCTTGGTTTCAGATTCAAATTTTAGTTCATGATGTAGTCATGTAGGCAGCCTTGGAGATCACATTGTGTATAAAATGGCAAACTGAAACTATTTTTTTTCCCTAGTTTGGCCAGGATAGTAAGG
...................................................................................(((((...(((((((((((((((.(((....(((......)))....)))...))))).)))))))))).((..((((.(((....(((...)))....))).))))..)))))))...................................................
.........................................................................74............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189782SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038858(GSM458541)
MEL202. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)
..............................................................................ATTGATTGTAGACACTGAAAAA......................................................................................................................................................2216.000.0016.00-------------------------------------------
..............................................................ATTATATTAAAATAAAATTGATTGTAG.................................................................................................................................................................27115.0015.00-8.007.00-----------------------------------------
..........................................................................TAAAATTGATTGTAGACACTGA..........................................................................................................................................................2214.004.00---------4.00----------------------------------
.........................................................................................................................................................................AGGCAGCCTTGGAGATCACATCGTG........................................................254.000.00-----4.00--------------------------------------
......................................................................AAAATAAAATTGATTGTAGACACT............................................................................................................................................................2413.003.00-----------------2.00----------------------1.00---
.....................................................................TAAAATAAAATTGATTGTAGACA..............................................................................................................................................................2313.003.00--------2.00-----------------------1.00-----------
.....................................................................TAAAATAAAATTGATTGTAGACAC.............................................................................................................................................................2413.003.00----3.00---------------------------------------
..................................................................................ATTGTAGACACTGAAGTTTAGTCTT...............................................................................................................................................2512.002.00------------------2.00-------------------------
.......................................................................AAATAAAATTGATTGTAGACACT............................................................................................................................................................2312.002.00--------1.00---1.00-------------------------------
.......................................................................AAATAAAATTGATTGTAGACA..............................................................................................................................................................2112.002.00---------------------1.00-------1.00--------------
.............................................................................................................................................................ATGTAGTCATGTAGGCAGCC.........................................................................2012.002.00----------------------------1.00--------1.00------
......................................................................................................................................TCAGATTCAAATTTTCCGC.................................................................................................192.000.00------2.00-------------------------------------
.......................................................................AAATAAAATTGATTGTAGACAC.............................................................................................................................................................2212.002.00----2.00---------------------------------------
...............CTTGTACATAAATTTTTCTTGG.....................................................................................................................................................................................................................2212.002.00-------2.00------------------------------------
................................................................................TGATTGTAGACACTGAAGTTTAG...................................................................................................................................................2312.002.00---------------2.00----------------------------
.............................................................................................................................................................ATGTAGTCATGTAGGCAGCCTTGGAG...................................................................2612.002.00---1.00-1.00--------------------------------------
...................................................................................TTGTAGACACTGAAGTTTAGTCTTATT............................................................................................................................................2712.002.00-----------2.00--------------------------------
................................................................................TGATTGTAGACACTGAAGTTTAGTCTT...............................................................................................................................................2712.002.00--------------------1.00-----1.00-----------------
.......................................................................AAATAAAATTGATTGTAGACACTG...........................................................................................................................................................2412.002.00----2.00---------------------------------------
....................................................................TTAAAATAAAATTGATTGTAGACA..............................................................................................................................................................2412.002.00----------------1.00-------------------1.00-------
..............................................................................................................................................................TGTAGTCATGTAGGCAGTCG........................................................................201.000.00---1.00----------------------------------------
...................................................................................................................................................................................................................AAACTATTTTTTTTCCCTAGTTTGGCCAGG.........3011.001.00-----------1.00--------------------------------
...........................................................................AAAATTGATTGTAGACACTGA..........................................................................................................................................................2111.001.00------------1.00-------------------------------
........................................................................AATAAAATTGATTGTAGACAC.............................................................................................................................................................2111.001.00----------1.00---------------------------------
..............................................................................ATTGATTGTAGACACTGAAGTTTAGTCTT...............................................................................................................................................2911.001.00------------------------------1.00-------------
.......CATCAACTCTTGTACATAAAT..............................................................................................................................................................................................................................2111.001.00-1.00------------------------------------------
......................................................................AAAATAAAATTGATTGTAGACA..............................................................................................................................................................2211.001.00------------------------1.00-------------------
....................ACATAAATTTTTCTTGGTA...................................................................................................................................................................................................................1911.001.00-------1.00------------------------------------
......................................................................AAAATAAAATTGATTGTAGACAC.............................................................................................................................................................2311.001.00----------1.00---------------------------------
...............................................................................TTGATTGTAGACACTGAAAAAA.....................................................................................................................................................221.000.00-------------1.00------------------------------
........................................................................AATAAAATTGATTGTAGACACT............................................................................................................................................................2211.001.00---------------------1.00----------------------
.........................................................................................................................................................................AGGCAGCCTTGGAGATCACATCGGG........................................................251.000.00-----1.00--------------------------------------
...........................................................................................................................................................TGATGTAGTCATGTAGGCAGCCTTGGAG...................................................................2811.001.00---1.00----------------------------------------
.................................................................................................................................................................AGTCATGTAGGCAGCCTTGGAGACCAC..............................................................271.000.00---1.00----------------------------------------
.............................................................................AATTGATTGTAGACACTGAAAAAA.....................................................................................................................................................2411.001.00-----------------------------------1.00--------
.......CATCAACTCTTGTACATAAATTTTTCT........................................................................................................................................................................................................................2711.001.00-1.00------------------------------------------
...............................................................................TTGATTGTAGACACTGAAAA.......................................................................................................................................................201.000.00--------1.00-----------------------------------
.................................................................................................................................................................AGTCATGTAGGCAGCCTTGGAGATCAC..............................................................2711.001.00----------------------1.00---------------------
...........................................................................AAAATTGATTGTAGACACTGAA.........................................................................................................................................................2211.001.00-------------------1.00------------------------
..........................ATTTTTCTTGGTATTTTCT.............................................................................................................................................................................................................1911.001.00-------------1.00------------------------------
..........................................................................TAAAATTGATTGTAGACACT............................................................................................................................................................2011.001.00------------1.00-------------------------------
.............................................................................AATTGATTGTAGACACTGAAGTTT.....................................................................................................................................................2411.001.00--------------------------------------1.00-----
..........................................................................TAAAATTGATTGTAGACACTGAAG........................................................................................................................................................2411.001.00----------------1.00---------------------------
..........................................................................................................................................................................................................................TTTTTTTCCCTAGTTTGGCCAGG.........2311.001.00---1.00----------------------------------------
.............................................................................AATTGATTGTAGACAC.............................................................................................................................................................1621.001.00----------------------0.500.50--------------------
...........................................................................AAAATTGATTGTAGACACTGAAAAAA.....................................................................................................................................................2611.001.00--------------1.00-----------------------------
.............................................................................AATTGATTGTAGACACTGAA.........................................................................................................................................................2011.001.00----------1.00---------------------------------
.................................................................................GATTGTAGACACTGAAGTT......................................................................................................................................................1911.001.00---------------------------------------1.00----
...........................................................................................................................................................TGATGTAGTCATGTAGGCAGCCTTGGAGATC................................................................3111.001.00-------1.00------------------------------------
........................................................................................................................................................................................................ATGGCAAACTGAAACTTTT...............................191.000.00-------------1.00------------------------------
...........................................................................AAAATTGATTGTAGAC...............................................................................................................................................................1621.001.00----------0.50-------------0.50-------------------
.............................................................................................................................................................ATGTAGTCATGTAGGCAGCCTCGG.....................................................................241.000.00---1.00----------------------------------------
...................................................................................TTGTAGACACTGAAGTTTAGTCTT...............................................................................................................................................2411.001.00---------------------------------1.00----------
........................................................................................................................................................................TAGGCAGCCTTGGAGACCAC..............................................................201.000.00---1.00----------------------------------------
....................................................................TTAAAATAAAATTGATTGTAGA................................................................................................................................................................2211.001.00--------------1.00-----------------------------
..........CAACTCTTGTACATAAATTTTTCTTG......................................................................................................................................................................................................................2611.001.00--1.00-----------------------------------------
................................................................................................................................................................TAGTCATGTAGGCAGCCTTGGAGATC................................................................2611.001.00-------------------------1.00------------------
....................................................................................................................................................................CATGTAGGCAGCCTTGGAGA..................................................................2011.001.00-------------------1.00------------------------
..............................................................................ATTGATTGTAGACACTGAAAAAA.....................................................................................................................................................231.000.00-------------------------------1.00------------
.....................................................................................................................................................................................................AAAATGGCAAACTGAAACTATTTTTCTTC........................291.000.00------1.00-------------------------------------
................................................................................................................................................................TAGTCATGTAGGCAGCCTTGGAGACCA...............................................................271.000.00---1.00----------------------------------------
..........................................................................TAAAATTGATTGTAGACACTGAAGTTTAGTCTT...............................................................................................................................................3311.001.00--------------------1.00-----------------------
.......................................................................................................................................CAGATTCAAATTTTAGTTCATGATGTAGTC.....................................................................................3011.001.00------1.00-------------------------------------
....................................................................................................................................................................CATGTAGGCAGCCTTGGAG...................................................................1911.001.00----------------------------------1.00---------
...............................................................TTATATTAAAATAAAATTGATTGTAGACA..............................................................................................................................................................2911.001.00-------1.00------------------------------------
...............................................................................TTGATTGTAGACACTGAAGTTTAGTCTTATT............................................................................................................................................3111.001.00-----------------------1.00--------------------
............................................................................AAATTGATTGTAGACAC.............................................................................................................................................................1720.500.50-----------------------------------------0.50--
.................................................................ATATTAAAATAAAATTGAT......................................................................................................................................................................1950.400.40------------------------------------------0.40-
.................................................................................................................................................................AGTCATGTAGGCAGC..........................................................................1550.200.20-------------------------0.20------------------
.............................................................................AATTGATTGTAGACA..............................................................................................................................................................1560.170.17-------------------------------------------0.17

Antisense strand
GCAATAGCATCAACTCTTGTACATAAATTTTTCTTGGTATTTTCTAAATGGTATGTGTTTAGATTATATTAAAATAAAATTGATTGTAGACACTGAAGTTTAGTCTTATTTCTATGACATTTCTCAGCTTGGTTTCAGATTCAAATTTTAGTTCATGATGTAGTCATGTAGGCAGCCTTGGAGATCACATTGTGTATAAAATGGCAAACTGAAACTATTTTTTTTCCCTAGTTTGGCCAGGATAGTAAGG
...................................................................................(((((...(((((((((((((((.(((....(((......)))....)))...))))).)))))))))).((..((((.(((....(((...)))....))).))))..)))))))...................................................
.........................................................................74............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189782SRR189784SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038858(GSM458541)
MEL202. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)
............................................................AGATTATATTAAAATATAGT.......................................................................................................................................................................... 201.000.00------1.00-------------------------------------
................................................................................................................................................................................CTTGGAGATCACATTGTGG....................................................... 191.000.00---------------------------1.00----------------
....................................................................TTAAAATAAAATTGACGAC................................................................................................................................................................... 191.000.00------1.00-------------------------------------