ID: uc001yfc.1
GENE: TCL1A(2)
chr14:96178090-96178606-


(1)
AGO1.ip OTHER.mut 		(1)
AGO2.ip 		(11)
B-CELL 		(1)
BRAIN 		(9)
BREAST 		(22)
CELL-LINE 		(1)
CERVIX 		(2)
OTHER 		(8)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAGTGTACCACATCAAGGTGAGTGTCTTTCTCCCAGAGGTCCATCGGGTGATCTTGGGTTTGCCCTCCTCCATGTCTGGCCTTAGTGGTTTATCTTCCCTCCATCCCAGTCCCAAAAGCATTAAAAAATGGGGGAAATGTACAAGTGCAGATTTCTAAAGGACTTTACCAGAGAGAAGATAGATCCTCTGAGGTCTCTAACAGAACCCTACCTCCACTTCCTCCCAGCCACCAGCTAGCCGCAGGAAGACATCTCTGGTGGGCAGTCACAGGCTGAAGGCTGGTGGGAGGAGGGGCAGTCTCCAAGAGCCCCTGAAATCCTCACACCTGGGTTCCTACCTGCTGTTTCCAGCTAGGGGAAGGCGCAGGAGTGAGGAATGGAGGGAGTGGAGGGCTCTGGCCGATCAATGCCTTCTCTCTCTCTCTGCCTCTCAGATTGACGGCGTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATG
....................................................................................................................................................................................................................................................................................................................................................................................................................((((...((((((((.(((((((..(((....)))..)))))))))))))))...))))......................................................
............................................................................................................................................................................................................................................................................................................................................................................................................397...................................................................467................................................
SizePerfect hitTotal NormPerfect NormSRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR189782SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189786TAX577739(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGA..............................................................................................22129.0029.001.001.00-6.005.001.003.003.002.001.002.00-1.003.00---------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAA.............................................................................................23126.0029.005.00-9.004.001.001.001.001.001.001.00--2.00----------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGCGTGGAGGACATG.............................18115.0015.009.001.00---1.002.002.00---------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGGACA...............................19111.0011.0010.001.00---------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGGACAT..............................20111.0011.007.004.00---------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAAAA...........................................................................................25111.0029.001.00---2.001.003.003.00----1.00----------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAT.............................................................................................23110.0029.001.00--4.00-4.00----1.00------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAG.............................................................................................2319.009.00-1.00-1.00-1.001.001.00-1.002.00-1.00----------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGACGGCGTGGAGGACAT..............................2118.008.00-6.002.00--------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGAGCTGCTGCCAGATGACTGAT.2618.008.00-2.006.00--------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAGT............................................................................................2417.009.001.00-6.00--------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGACGGCGTGGAGG..................................1817.007.006.00--1.00-------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCGTGGAGGACATGCT...........................1916.006.003.003.00---------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGG...............................................................................................2116.006.00----2.002.00--1.001.00-------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAAA............................................................................................2416.0029.004.00--------2.00-------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCTGCTGCCAGATGACTGATG2416.006.00-6.00---------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGGAC................................1816.006.004.00-------2.00--------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGGCGTGGAGGACATG.............................1915.005.00-3.00---1.00----------------------1.00------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAATGGAGGGAGTGGAG.............................................................................................2115.005.00------1.001.00-2.00--------------------------1.00----------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAAT............................................................................................2414.0029.001.00--1.00------2.00------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGAGCTGCTGCCAGATGACTG...2314.004.00-2.00------2.00--------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCTGCTGCCAGATGACTG...2114.004.00-4.00---------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGGCGTGGAGGACA...............................1714.004.00--3.00----------1.00---------------------------------------------
...........................................................................................................................................................................................................................................................................................................................GTGGGAGGAGGGGCAAAA........................................................................................................................................................................................183.000.00-----------------3.00-----------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGTGGAGGACATGCT...........................1813.003.001.00-------1.00---1.00----------------------------------------------
...ACCGATCCTCAGACTCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003.001.00----------2.00-----------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGACGGCGTGGAGGA.................................1913.003.002.00----------1.00-----------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAAG............................................................................................2413.0029.00------1.001.001.00--------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCTGCTGCCAGATGACTGAT.2413.003.00-3.00---------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGA...............................................................................................2122.502.00------1.001.00-0.50-------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACATGCTTCTCGAGCTGCTGC.............2512.002.00----2.00------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGGACATG.............................2112.002.00-1.00---1.00-----------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAATGGAGGGAGTGGAGGGAT.........................................................................................252.000.00------1.001.00---------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGT.................................................................................................1922.002.00------1.001.00---------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTG................................................................................................2022.002.000.50--0.50-0.50----------------------------------------------0.50------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGTGGAGGACATTTA...........................182.000.002.00----------------------------------------------------------
.ATACCGATCCTCAGACTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.001.00-------1.00--------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGGCGTGGAGGACA...............................1812.002.001.001.00---------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGACGGCGTGGAGGACATGCTTCT........................2712.002.00-2.00---------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGGCGTGGAGGACAT..............................1912.002.00-2.00---------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGACGGCGTGGAGGA.................................1812.002.002.00----------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGGACAA..............................2012.0011.002.00----------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGCGTGGAGGACATA.............................182.000.002.00----------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAATGGAGGGAGTGGAGA............................................................................................2212.005.00------1.001.00---------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCCAGATGACTGAT.1912.002.00--------2.00--------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGATGT...........................................................................................2512.0029.00------1.001.00---------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAGGGC..........................................................................................2612.002.00----------2.00------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGCGTGGAGGACATGCTT..........................2112.002.00-2.00---------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGACGGCGTGGAGGAC................................2011.001.00----1.00------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAATGGAGGGAGTGGAGGGCT.........................................................................................2411.001.00--------1.00--------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGGACCT..............................2011.006.00-1.00---------------------------------------------------------
...............................................................................................................................................................................................................................................................................CCGCAGGAAGACATCCGC....................................................................................................................................................................................................................................181.000.00-------------------------1.00---------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGTGGAGGACATGAA...........................181.000.001.00----------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGGAA................................181.000.001.00----------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGACGGCGTGGAGGACATT.............................231.000.00-1.00---------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCTTCTCTCTCTCTCTGCTT.......................................................231.000.00--------1.00--------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGACGGCGTGGAGGAC................................1911.001.00----1.00------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGAGTGGAGGGTGT........................................................................................181.000.00---------------------------------1.00-------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGCGTGGAGGACATTT............................191.000.001.00----------------------------------------------------------
................................................................................................................................................................................AGTGCAGATTTCTAAAGGACTT...............................................................................................................................................................................................................................................................................................................................2211.001.001.00----------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCCAGATGACTGATG1911.001.00-----------1.00-----------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGGACCTG.............................2111.006.00-1.00---------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGAGTGGAGGGCTGA.......................................................................................181.000.00------------------------------------------------1.00----------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGACGGCGTGGAGGACA...............................2011.001.00----1.00------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGACGGCGTGGAGGT.................................1911.007.00---------1.00-------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGGCC................................181.000.001.00----------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCTGCTGCCAGATGA......1911.001.00----1.00------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGACGGCGTGGAGGACATTTT...........................2411.008.00----1.00------------------------------------------------------
..TACCGATCCTCAGACTCCAGTTTCTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00------------------1.00----------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGAAA................................181.000.001.00----------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTCTCGAGCTGCTGCCAGATGAC.....2611.001.00------------------1.00----------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAATGGAGGGAGTGGAGG............................................................................................2211.001.00-----------1.00-----------------------------------------------
...................................................................................................................................................................................................................................................CCTCCACTTCCTCCCAGCCACCAGCTAGCCG...................................................................................................................................................................................................................................................3111.001.00--------------------------------------------1.00--------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCAGATTGACGGCGTGGAGGA.................................2411.001.001.00----------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCGTGGAGGACATGC............................1811.001.001.00----------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAATGGAGGGAGTGGAGGAAA.........................................................................................2511.001.00--------1.00--------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGACGGCGTGGAGGAA................................2011.003.00-----1.00-----------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAGGG...........................................................................................2511.001.00---1.00-------------------------------------------------------
............................................................................................................................................................................................TAAAGGACTTTACCAGAGAGAAGATA...............................................................................................................................................................................................................................................................................................................2611.001.00------------------1.00----------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGGCGTGGAGGACATGC............................2011.001.00-----1.00-----------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGCGTGGAGGACATTTA...........................201.000.001.00----------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGCGTGGAGGACATGCTA..........................211.000.001.00----------------------------------------------------------
....................AGTTTCTGGCGCTTAGTGTACCAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.001.00----------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGAGCTGCTGCCAGATGACTGAT.2511.001.00------------1.00----------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGACGGCGTGGAGTA.................................191.000.00--------1.00--------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGATAAA..........................................................................................2611.0029.00----------1.00------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCTCTCTGCCTCTCAGA.................................................2211.001.00-1.00---------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAC.............................................................................................2311.0029.00-----1.00-----------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCTGCTGCCAGATGACTGA..2211.001.00-1.00---------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGACGGCGTGGAGGACATGCT...........................2411.001.00-1.00---------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGCGTGGAGGACATT.............................181.000.001.00----------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAATGGAGGGAGTGGAGGT...........................................................................................2311.001.00---------------1.00-------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGAGCTGCTGCCAGATGACT....2211.001.00----1.00------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGTAT............................................................................................2411.006.00-----1.00-----------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................TCCAGCTAGGGGAAGGC.........................................................................................................................1711.001.00-----------------------------------------------1.00-----------
...ACCGATCCTCAGACTCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.001.00----------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGAGGA..............................................................................................221.000.00-----------1.00-----------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGCGTGGAGGACCGA.............................181.000.00----------------------------------------1.00------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCTTCTCTCTCTCTCTGCT........................................................221.000.00---1.00-------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTGCCT.......................................................1501.001.00-----------------------------------1.00-----------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTCTCTCTCTCTCCTAG........................................................211.000.00--------------1.00--------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGAGCTGCTGCCAGATGACTGA..2411.001.00----1.00------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCAGATTGACGGCGTG......................................2011.001.001.00----------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGGACATGC............................2211.001.00-1.00---------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGGCGTGGAGGACATGT............................2211.002.00-1.00---------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAAATT..........................................................................................2611.0029.00-----1.00-----------------------------------------------------
..................................................................................................................................................................................................................................................................................................................TGAAGGCTGGTGGGAGGAGG...............................................................................................................................................................................................2011.001.00----1.00------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGGAGA............................................................................................2411.009.00---------1.00-------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGGCGTGGAGGACAT..............................1811.001.00----1.00------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGGAATGGAGGGAGTGTA..............................................................................................2220.502.00---0.50-------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................GCGCAGGAGTGAGGA............................................................................................................1520.500.50-----------------------------------------------------0.50-----
............................................................................................................................................................................................................................................................................................................................................................................................CCAGCTAGGGGAAGGC.........................................................................................................................1630.330.33------------------------------------------------------0.33----
...................................................................................................................................................................................................................................................................................................................................AGGGGCAGTCTCCAA...................................................................................................................................................................................1540.250.25--------------------------------------------------------0.25--
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCTCTCTGCCTCTCA...................................................2050.200.20-------------------------0.20---------------------------------

Antisense strand
GATACCGATCCTCAGACTCCAGTTTCTGGCGCTTAGTGTACCACATCAAGGTGAGTGTCTTTCTCCCAGAGGTCCATCGGGTGATCTTGGGTTTGCCCTCCTCCATGTCTGGCCTTAGTGGTTTATCTTCCCTCCATCCCAGTCCCAAAAGCATTAAAAAATGGGGGAAATGTACAAGTGCAGATTTCTAAAGGACTTTACCAGAGAGAAGATAGATCCTCTGAGGTCTCTAACAGAACCCTACCTCCACTTCCTCCCAGCCACCAGCTAGCCGCAGGAAGACATCTCTGGTGGGCAGTCACAGGCTGAAGGCTGGTGGGAGGAGGGGCAGTCTCCAAGAGCCCCTGAAATCCTCACACCTGGGTTCCTACCTGCTGTTTCCAGCTAGGGGAAGGCGCAGGAGTGAGGAATGGAGGGAGTGGAGGGCTCTGGCCGATCAATGCCTTCTCTCTCTCTCTGCCTCTCAGATTGACGGCGTGGAGGACATGCTTCTCGAGCTGCTGCCAGATGACTGATG
....................................................................................................................................................................................................................................................................................................................................................................................................................((((...((((((((.(((((((..(((....)))..)))))))))))))))...))))......................................................
............................................................................................................................................................................................................................................................................................................................................................................................................397...................................................................467................................................
SizePerfect hitTotal NormPerfect NormSRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR189782SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189786TAX577739(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		TAX577745(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTGCCTCTCACTTT............................................... 239.000.00--------------1.00-1.00---1.001.001.00---1.00----------1.00----1.00--------1.00-------
.......................................................................................................................................................................................................................CTGTTAGAGACCTCAGAGGAT......................................................................................................................................................................................................................................................................................... 2113.003.00-3.00---------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTGCCTCTCATTTT............................................... 232.000.00----------------1.00---------------------------------1.00--------
..CTGGAGTCTGAGGATCGGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 2012.002.00-2.00---------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................CTCACACCTGGGTTCCTGC.................................................................................................................................................. 192.000.00-------------------2.00---------------------------------------
............................................................................................................................................AATGCTTTTGGGACT.......................................................................................................................................................................................................................................................................................................................................................................... 1591.221.22------------------------1.22----------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTGCCTCTCACTT................................................ 221.000.00-------------------------------1.00---------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCTCTCTGCCTCGCC................................................... 201.000.00-----------------------------------------1.00-----------------
.................................................................................................CTCCTCCATGTCTGGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................. 181.000.00---------------------------------------------1.00-------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATGCCTTCTCTCTCGC.............................................................. 191.000.00--------------------1.00--------------------------------------
..............................................................................................................................................................................................................................................CCCTACCTCCACTTCGCC..................................................................................................................................................................................................................................................................... 181.000.00-----------------------------1.00-----------------------------
................................................................................................................................................................................................................................................................................................................................................................CTCACACCTGGGTTCCTG................................................................................................................................................... 181.000.00-------------------1.00---------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTGCCTCTCAATTA............................................... 231.000.00----------------1.00------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTGCCTCTCACGGT............................................... 231.000.00----------------------1.00------------------------------------
..........CTCAGACTCCAGTTTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-------------------------------------------------1.00---------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTGCCTCTCACTCT............................................... 231.000.00--------------------------------1.00--------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTGCCTCTCACTGT............................................... 231.000.00--------------1.00--------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGGAGGGCTCTGACGA.................................................................................. 211.000.00-----------------------1.00-----------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTGCCTCTCAT.................................................. 201.000.00---------------------------1.00-------------------------------
.....................................................................................................................................................................................................................................................GTGGCTGGGAGGAAGTGGA............................................................................................................................................................................................................................................................. 1911.001.00---------------1.00-------------------------------------------
........................................................................................................................................................................................................................................................................................................................................CAGTCTCCAAGAGCCTGT........................................................................................................................................................................... 181.000.00------------------------------1.00----------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTGCCTCTCACAA................................................ 221.000.00---------------------1.00-------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCTCTCTGCCTCTCAGATT............................................... 2451.000.00---1.00-------------------------------------------------------
....CTGGAGTCTGAGGATCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1811.001.00-1.00---------------------------------------------------------
.....................................................................................................................................................................................................................................................TGGTGGCTGGGAGGAAGTGGA........................................................................................................................................................................................................................................................... 2111.001.00---------------1.00-------------------------------------------
........................................................................................................................................................................................................................................................................................................................CTGGTGGGAGGAGGGGAA........................................................................................................................................................................................... 181.000.00----------------------------------1.00------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCTGCCTCTCACGCC............................................... 201.000.00--------------1.00--------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGGAGGGCTCTGGCGA.................................................................................. 211.000.00-----------------------1.00-----------------------------------
..........CTCAGACTCCAGTTTCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00--------------------------------------1.00--------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTCTGCCTCTCACT................................................. 211.000.00---------------------------------------1.00-------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGAGGCAGAGA................................................. 1501.001.00----------------------------------------------1.00------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCTCTGCCTCTCAGCT................................................ 211.000.00-------------------------------------------1.00---------------
...................................................................................................AGGCCAGACATGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................. 1670.290.29-------------------------------------------------------0.29---
..........................................................................................TGGAGGAGGGCAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................ 1570.140.14---------------------------------------------------------0.14-
.....................................................................................................................................................................................................................................................GCTGGGAGGAAGTGGA................................................................................................................................................................................................................................................................ 1690.110.11----------------------------------------------------------0.11