| (4) BRAIN | (3) BREAST | (4) CELL-LINE | (4) CERVIX | (1) FIBROBLAST | (2) HEART | (3) HELA | (1) LIVER | (2) OTHER | (18) SKIN |
| TTGTTTTGCGCTGCCTCCTTAGGATGTTGCAATGCTACTGCCTTTACTGTTGTGAGTTTTTGTTTTGTGTGTTTTATGTCTCTTTGTGTGTTTGCAGTGTGCTGATGTTTGACTCTCCTTGCTCTCTCTCTGTCTCTCTCTGGCCGCCTCCATGGTGAACACCATGCTTCCTCTACTTAATTGGACCTTCATTTCTGTAGGTAGAAGTAAAGGTAGAGCTCACTTTATTTTTATCATTATAACTATCAAT ......................................................................(((..(((((...((((......))))......)))))..)))......................................................................................................................................... ..................................................51.............................................................114...................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR189785 | SRR189782 | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin) | GSM450607(GSM450607) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040008(GSM532893) G727N. (cervix) | SRR330875(SRX091713) tissue: skin psoriatic involveddisease state:. (skin) | TAX577739(Rovira) total RNA. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | GSM450600(GSM450600) miRNA sequencing raw reads from post-mortem s. (brain) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | GSM532887(GSM532887) G761N. (cervix) | SRR040043(GSM532928) G428T. (cervix) | SRR363673(GSM830250) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040035(GSM532920) G001T. (cervix) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela) | TAX577743(Rovira) total RNA. (breast) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330920(SRX091758) tissue: normal skindisease state: normal. (skin) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR191581(GSM715691) 104genomic small RNA (size selected RNA from . (breast) | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................TTGCAGTGTGCTGATGTGC............................................................................................................................................ | 19 | 32.00 | 0.00 | 15.00 | 11.00 | - | - | - | - | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................TTGCAGTGTGCTGATG............................................................................................................................................... | 16 | 3 | 11.00 | 11.00 | 0.67 | 3.33 | - | - | - | - | 0.67 | 0.33 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 0.67 | 0.67 | 0.67 | 0.33 | 0.33 | - | 0.33 | 0.33 | 0.33 | 0.33 | - | 0.33 | 0.33 | 0.33 |
| ......................................................AGTTTTTGTTTTGTGGCTC................................................................................................................................................................................. | 19 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................ACTTTATTTTTATCATTAG.......... | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................AGAAGTAAAGGTAGAGCTCACTTTAT...................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................GGTAGAAGTAAAGGTAGAGCTC............................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................CTGCCTTTACTGTTGATCC.................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................CTCCATGGTGAACACAAA..................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................CTTTATTTTTATCATTACTTG....... | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................CTCTGGCCGCCTCCATGG............................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................TGCAGTGTGCTGATGTG............................................................................................................................................. | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................TCTCTCTCTGGCCGCCCC.................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................TTTATTTTTATCATTATTTG....... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................TTTTGTGTGTTTTATGTCCG........................................................................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................CAGTGTGCTGATGTTAATG......................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................TTGCAGTGTGCTGATGGGC............................................................................................................................................ | 19 | 3 | 0.67 | 11.00 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TTGCAGTGTGCTGATGCG............................................................................................................................................. | 18 | 3 | 0.33 | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - |
| TTGTTTTGCGCTGCCTCCTTAGGATGTTGCAATGCTACTGCCTTTACTGTTGTGAGTTTTTGTTTTGTGTGTTTTATGTCTCTTTGTGTGTTTGCAGTGTGCTGATGTTTGACTCTCCTTGCTCTCTCTCTGTCTCTCTCTGGCCGCCTCCATGGTGAACACCATGCTTCCTCTACTTAATTGGACCTTCATTTCTGTAGGTAGAAGTAAAGGTAGAGCTCACTTTATTTTTATCATTATAACTATCAAT ......................................................................(((..(((((...((((......))))......)))))..)))......................................................................................................................................... ..................................................51.............................................................114...................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR189785 | SRR189782 | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | SRR330891(SRX091729) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330867(SRX091705) tissue: skin psoriatic involveddisease state:. (skin) | GSM450607(GSM450607) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR040008(GSM532893) G727N. (cervix) | SRR330875(SRX091713) tissue: skin psoriatic involveddisease state:. (skin) | TAX577739(Rovira) total RNA. (breast) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330919(SRX091757) tissue: normal skindisease state: normal. (skin) | GSM450600(GSM450600) miRNA sequencing raw reads from post-mortem s. (brain) | GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) | GSM532887(GSM532887) G761N. (cervix) | SRR040043(GSM532928) G428T. (cervix) | SRR363673(GSM830250) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | GSM450605(GSM450605) miRNA sequencing raw reads from post-mortem s. (brain) | SRR040035(GSM532920) G001T. (cervix) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | DRR001487(DRX001041) "Hela long nuclear cell fraction, LNA(+)". (hela) | TAX577743(Rovira) total RNA. (breast) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330920(SRX091758) tissue: normal skindisease state: normal. (skin) | SRR330865(SRX091703) tissue: skin psoriatic involveddisease state:. (skin) | SRR330913(SRX091751) tissue: normal skindisease state: normal. (skin) | SRR191581(GSM715691) 104genomic small RNA (size selected RNA from . (breast) | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart) | SRR330877(SRX091715) tissue: skin psoriatic involveddisease state:. (skin) | SRR330894(SRX091732) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR330915(SRX091753) tissue: normal skindisease state: normal. (skin) | SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................GTAGGTAGAAGTAAAGG..................................... | 17 | 6.00 | 0.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...TTTTGCGCTGCCTCCA....................................................................................................................................................................................................................................... | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................TGTGTTTTATGTCTCTTCTG................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................ACTCTCCTTGCTCTCGGG......................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TGCTCTCTCTCTGTCTCTTGG.............................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................CTCTCTGTCTCTCTCTGGTGC........................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................TGCTCTCTCTCTGTCTCTCTCCTG........................................................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................GTAGGTAGAAGTAAAG...................................... | 16 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................TGTGTGTTTGCAGTGTAG.................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................CAGAGAGAGACAGAGAGAGAGC............................................................................................................ | 22 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - |