ID: uc001xth.1_intron_4_0_chr14_77746424_r
GENE: POMT2(10)
chr14:77746374-77746784-


(1)
AGO1.ip 		(1)
B-CELL 		(4)
BRAIN 		(8)
BREAST 		(8)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(2)
HEART 		(6)
LIVER 		(2)
OTHER 		(2)
SKIN

Sense strand
AGGACAATGAGTTCACGTCCAAACCCTGGCACTGGCCTATCAACTATCAGGTAGGATCCAAGGCTGGGGCTCCTCCCAGGAAATGGAGCCAAGAACAAGAGCAGGGAGACCGGTGGAGGCGGGGGTGGGTGTACTAGGGCGGCAGGGCGAGGGGCCTCCTGGGATGGGTTGGCCAGAGGTGGGAGTATCTGTTTTCTGCCCTAATTCTGACCCTGCTTCCCAGAGAGCTCGTGTAGAATTTGCCAGCCTGAGGTTCGTGTCCAGGCTCCCTGTCTGTGGAAGGTGACCATCTTCCTCCCCCTAATGGGTGTGGCCGAGGATGGGCTGGGCCTGGGTCAGCAGGGTGGTCTCTATTCCACAGGGCCTACGCTTCTCAGGGGTCAATGACACAGATTTCCGAGTCTATCTGCT
............................................................................................................................................................................................................................(((.(((((......((((((.........)))))).......))))).))).((((((((((.(((((((((.((..(((....((((.(((((.......))))).)))))))..)).))))))))).)).))))))))..................................................
......................................................................................................................................................................................................................215...............................................................................................................................................361................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR189782SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189783SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR040009(GSM532894)
G727T. (cervix)		SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR038855(GSM458538)
D10. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR040012(GSM532897)
G648N. (cervix)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
...........................................................................................................................................................................................................................CCAGAGAGCTCGTGTAGGG.............................................................................................................................................................................1911.000.0011.00----------------------------------------
...................................................................................................................................................................................................................................................................................................................................................CAGGGTGGTCTCTATTCCACAG..................................................2219.009.00-9.00---------------------------------------
..........................................................................................................................................................................................................................CCCAGAGAGCTCGTGTAGGG.............................................................................................................................................................................206.000.006.00----------------------------------------
...................................................................................TGGAGCCAAGAACAAGAGGA....................................................................................................................................................................................................................................................................................................................203.000.00--3.00--------------------------------------
...........................................................................................................................................................................................................................................................GGTTCGTGTCCAGGCGGAG.............................................................................................................................................193.000.00---1.00--------1.001.00---------------------------
...................................................................................................................................................................................................................................................................................................................................................CAGGGTGGTCTCTATTCCACAGT.................................................2312.009.00-1.00-------------------1.00-------------------
...........................................................................................................................................................................................................................................................GGTTCGTGTCCAGGCGGA..............................................................................................................................................182.000.00---1.00----------------------1.00--------------
................................................................................................................................................................................................................................................................................TCTGTGGAAGGTGACCATCTT......................................................................................................................2112.002.00-----------1.00------------------------1.00----
...................................................................................................................................................................................................................................................................................................................................................CAGGGTGGTCTCTATTCCACA...................................................2112.002.00------2.00----------------------------------
..............................................................................................................................................................................................................................................................................................................................................GTCAGCAGGGTGGTCTCTATTCT......................................................232.000.00-----2.00-----------------------------------
............................................................................................................................................................................................................................CAGAGAGCTCGTGTAGGG.............................................................................................................................................................................182.000.002.00----------------------------------------
..................................................................................................................................................................................................................................................................................................................................................GCAGGGTGGTCTCTATTCCACAGT.................................................2411.001.00-1.00---------------------------------------
...........................................................................................................................................................................................................................................................................................................................................TGGGTCAGCAGGGTGGGTAC............................................................201.000.00---------------1.00-------------------------
...............................................................................................................................................................................................................................................................................GTCTGTGGAAGGTGACCATCTT......................................................................................................................2211.001.00----------------1.00------------------------
...........................................................................................................................................................................................................................................................................................................................................TGGGTCAGCAGGGTGGATT.............................................................191.000.00----------------------1.00------------------
..................................................................................................................................................................................................................................................................................................................................................GCAGGGTGGTCTCTATTCCAC....................................................2111.001.00-----------------------------------1.00-----
..................................................................................................................................................................................................................................................................................................................................................GCAGGGTGGTCTCTATTCCA.....................................................2011.001.00--------1.00--------------------------------
..................................................................................................................................................................................................................................................................................................................................................GCAGGGTGGTCTCTATTCCACAG..................................................2311.001.00-1.00---------------------------------------
........................................................................................................................GGGGGTGGGTGTACTTTT.................................................................................................................................................................................................................................................................................181.000.00---------------------------------------1.00-
...................................................................................................................................................................................TGGGAGTATCTGTTTTTCGG....................................................................................................................................................................................................................201.000.00-----------------1.00-----------------------
..................................................................................................................................................................................................................................................................................TGTGGAAGGTGACCATCTTCCT...................................................................................................................2211.001.00-1.00---------------------------------------
..............................................................................................................................................................................................................................GAGAGCTCGTGTAGAATTTGCCA......................................................................................................................................................................2311.001.00------------------1.00----------------------
.................................................................................................................................................................................................................................................................................CTGTGGAAGGTGACCATCTTT.....................................................................................................................211.000.00--------1.00--------------------------------
....................................................................................................................................ACTAGGGCGGCAGGGA.......................................................................................................................................................................................................................................................................161.000.00-------1.00---------------------------------
...................................................................................................................................................................................................................................................................................................................................................CAGGGTGGTCTCTATTCCA.....................................................1911.001.00---------------------------------1.00-------
...........................................................................CCAGGAAATGGAGCCAAGAACAAGAGCAGGGA................................................................................................................................................................................................................................................................................................................3211.001.00---------1.00-------------------------------
...........................................................................................................................................................................................................................................................GGTTCGTGTCCAGGCCGAG.............................................................................................................................................191.000.00-----------------------------1.00-----------
..................................................................................................................................................................................................................................................................................................................................................................TCCACAGGGCCTACGTTCC......................................191.000.00----------------------------1.00------------
.......................................................................................................................................AGGGCGGCAGGGCGAAAAT.................................................................................................................................................................................................................................................................191.000.00-------------------------1.00---------------
...........................................................................................................................................................................................................................................................GGTTCGTGTCCAGGCGGAT.............................................................................................................................................191.000.00------------------------1.00----------------
..................................................................................................................................................................................................................................................................................TGTGGAAGGTGACCATCTTCC....................................................................................................................2111.001.00-------------------1.00---------------------
.............................................................................................................................................................................................................................................................................................................................................................................................CAATGACACAGATTTCCGAGT.........2111.001.00-----------------------1.00-----------------
..................................................................................................................GGAGGCGGGGGTGGGTGGC......................................................................................................................................................................................................................................................................................191.000.00--------------1.00--------------------------
...................................................................................................................................................................................................................................................................................................................................................CAGGGTGGTCTCTATTCCATAG..................................................2211.001.00----1.00------------------------------------
.................................................................................................................................................................................................................................................................................................................................GGGCTGGGCCTGGGTCAGCAGGGT..................................................................2411.001.00----------------------------------1.00------
..............................................................................................................................................................................................................................................................................................................................................................................ACGCTTCTCAGGGGTCAACGAC.......................221.000.00------------------------------1.00----------
...................................................................................................................................................................................................................................................................................................................................................CAGGGTGGTCTCTATTCCACACT.................................................2311.002.00----1.00------------------------------------
..................................................................................................................................................................................................................................................................................................................................................GCAGGGTGGTCTCTATTCCACA...................................................2211.001.00--------------------------------1.00--------
...................................................................................................................................................................................................................................................................................................................................................CAGGGTGGTCTCTATTCCAA....................................................2011.001.00-------------------------------1.00---------
.....................................................................................................................................................AGGGGCCTCCTGGGATGG....................................................................................................................................................................................................................................................1830.330.33---------0.33-------------------------------

Antisense strand
AGGACAATGAGTTCACGTCCAAACCCTGGCACTGGCCTATCAACTATCAGGTAGGATCCAAGGCTGGGGCTCCTCCCAGGAAATGGAGCCAAGAACAAGAGCAGGGAGACCGGTGGAGGCGGGGGTGGGTGTACTAGGGCGGCAGGGCGAGGGGCCTCCTGGGATGGGTTGGCCAGAGGTGGGAGTATCTGTTTTCTGCCCTAATTCTGACCCTGCTTCCCAGAGAGCTCGTGTAGAATTTGCCAGCCTGAGGTTCGTGTCCAGGCTCCCTGTCTGTGGAAGGTGACCATCTTCCTCCCCCTAATGGGTGTGGCCGAGGATGGGCTGGGCCTGGGTCAGCAGGGTGGTCTCTATTCCACAGGGCCTACGCTTCTCAGGGGTCAATGACACAGATTTCCGAGTCTATCTGCT
............................................................................................................................................................................................................................(((.(((((......((((((.........)))))).......))))).))).((((((((((.(((((((((.((..(((....((((.(((((.......))))).)))))))..)).))))))))).)).))))))))..................................................
......................................................................................................................................................................................................................215...............................................................................................................................................361................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR189782SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189783SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR040009(GSM532894)
G727T. (cervix)		SRR191449(GSM715559)
144genomic small RNA (size selected RNA from . (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR038855(GSM458538)
D10. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577742(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR040012(GSM532897)
G648N. (cervix)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
.............................CACTGGCCTATCAACTTG............................................................................................................................................................................................................................................................................................................................................................................ 181.000.00---------------------------1.00-------------
..................CCAAACCCTGGCACTTTT....................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00-------1.00---------------------------------
.......................................................................................................................................................................................................................................................................................................................GGCCGAGGATGGGCTCCA.................................................................................. 181.000.00----------1.00------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................CAGATTTCCGAGTCTATT.... 181.000.00-------------------------------------1.00---
.......................................................................................................................................................................................................................................................................................................................GGCCGAGGATGGGCTCCC.................................................................................. 181.000.00--------------------------------------1.00--
.................................................................................................................................................................................................................................................................................................TCTTCCTCCCCCTAATAT........................................................................................................ 181.000.00--------------------1.00--------------------
........................................................................................................................................................CCCATCCCAGGAGGCC................................................................................................................................................................................................................................................... 1690.110.11----------------------------------------0.11